Wall clock time and date at job start Tue Mar 9 2021 13:29:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86299 * 109.46764 * 2 1 4 4 C 1.50696 * 109.47346 * 239.99916 * 2 1 3 5 5 C 1.34238 * 126.49665 * 105.35263 * 4 2 1 6 6 N 1.36842 * 109.93516 * 180.13483 * 5 4 2 7 7 C 1.46495 * 125.06182 * 179.81954 * 6 5 4 8 8 C 1.50699 * 109.47005 * 264.69448 * 7 6 5 9 9 O 1.21290 * 119.99829 * 0.02562 * 8 7 6 10 10 N 1.34778 * 120.00321 * 180.02562 * 8 7 6 11 11 C 1.46495 * 120.00037 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.85167 * 336.19310 * 11 10 8 13 13 C 1.54052 * 113.69874 * 107.46677 * 11 10 8 14 14 C 1.53781 * 86.98687 * 139.98728 * 13 11 10 15 15 H 1.09002 * 113.61445 * 89.16393 * 14 13 11 16 16 Br 1.96598 * 113.61384 * 219.98086 * 14 13 11 17 17 C 1.53783 * 113.61332 * 205.00239 * 11 10 8 18 18 C 1.37688 * 109.87041 * 359.55050 * 6 5 4 19 19 C 1.39089 * 133.51132 * 180.28551 * 18 6 5 20 20 C 1.37786 * 119.77996 * 179.97438 * 19 18 6 21 21 C 1.38793 * 120.66722 * 0.02562 * 20 19 18 22 22 C 1.36659 * 120.52676 * 0.02562 * 21 20 19 23 23 C 1.39592 * 119.76658 * 359.95435 * 22 21 20 24 24 H 0.96699 * 113.99958 * 299.99286 * 1 2 3 25 25 H 1.09003 * 109.47134 * 119.99619 * 2 1 3 26 26 H 1.48498 * 110.00229 * 299.99777 * 3 2 1 27 27 H 1.48510 * 109.99987 * 61.31751 * 3 2 1 28 28 H 1.07998 * 125.03742 * 359.97438 * 5 4 2 29 29 H 1.08996 * 109.47509 * 144.69566 * 7 6 5 30 30 H 1.09007 * 109.47376 * 24.69219 * 7 6 5 31 31 H 0.96995 * 119.99650 * 359.97438 * 10 8 7 32 32 H 1.08999 * 113.60931 * 25.48106 * 13 11 10 33 33 H 1.08998 * 113.69722 * 254.50188 * 13 11 10 34 34 H 1.08992 * 113.61796 * 105.38277 * 17 11 10 35 35 H 1.09000 * 113.61157 * 334.47697 * 17 11 10 36 36 H 1.08005 * 120.11074 * 359.97438 * 19 18 6 37 37 H 1.08002 * 119.67044 * 180.02562 * 20 19 18 38 38 H 1.07999 * 119.74111 * 179.97438 * 21 20 19 39 39 H 1.07998 * 120.11999 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 2.4669 -0.1380 -2.3201 6 7 2.8041 -1.0990 -3.2340 7 6 3.4097 -0.8404 -4.5426 8 6 2.3307 -0.7840 -5.5932 9 8 1.1700 -0.9435 -5.2795 10 7 2.6554 -0.5561 -6.8812 11 6 1.6064 -0.5007 -7.9023 12 1 0.7059 -1.0430 -7.6140 13 6 1.3290 0.9204 -8.4285 14 6 1.1961 0.2898 -9.8248 15 1 0.1834 -0.0364 -10.0620 16 35 2.0060 1.3673 -11.2559 17 6 2.1047 -0.8421 -9.3165 18 6 2.4948 -2.3456 -2.7379 19 6 2.6304 -3.6362 -3.2385 20 6 2.2166 -4.7108 -2.4818 21 6 1.6641 -4.5193 -1.2231 22 6 1.5206 -3.2599 -0.7122 23 6 1.9335 -2.1569 -1.4615 24 1 -0.3933 0.4416 0.7651 25 1 1.7923 -0.5138 0.8900 26 1 1.5614 2.4679 -1.2085 27 1 1.5877 2.4586 1.2243 28 1 2.6082 0.9240 -2.4566 29 1 4.1097 -1.6404 -4.7835 30 1 3.9407 0.1112 -4.5157 31 1 3.5836 -0.4282 -7.1320 32 1 2.1799 1.5950 -8.3333 33 1 0.4009 1.3526 -8.0545 34 1 1.8024 -1.8317 -9.6589 35 1 3.1672 -0.6484 -9.4637 36 1 3.0587 -3.7956 -4.2171 37 1 2.3231 -5.7121 -2.8721 38 1 1.3444 -5.3723 -0.6429 39 1 1.0895 -3.1185 0.2678 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17509654_9818708.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:29:48 Heat of formation + Delta-G solvation = 36.612815 kcal Electronic energy + Delta-G solvation = -24196.985262 eV Core-core repulsion = 20540.221907 eV Total energy + Delta-G solvation = -3656.763356 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.041 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.47003 -41.16781 -39.40074 -37.96280 -37.57962 -34.83725 -34.06461 -31.50011 -31.04572 -30.15714 -29.04912 -27.12818 -26.12479 -24.91290 -23.57197 -22.54891 -21.77554 -21.04954 -20.41615 -18.58377 -18.37706 -18.27337 -17.68309 -17.32068 -16.72534 -16.35921 -16.30703 -15.75885 -15.64793 -14.94364 -14.76631 -14.63482 -14.42958 -14.30608 -14.00952 -14.00421 -13.88469 -13.44520 -13.39984 -13.08454 -12.65384 -12.44126 -12.39045 -12.30250 -11.98724 -11.86087 -11.59079 -11.14645 -10.89971 -10.88043 -10.40177 -10.29926 -10.26473 -9.00505 -8.51434 -4.93469 0.28866 0.54034 0.80995 1.32699 1.34563 1.41712 1.61664 1.74820 2.00172 2.09820 2.97009 3.01541 3.10302 3.35490 3.43532 3.50971 3.56388 3.68509 3.73036 3.82058 3.88774 4.08374 4.20796 4.29880 4.32698 4.32808 4.36570 4.45811 4.51763 4.64654 4.71071 4.80631 4.81034 4.91810 5.00721 5.21108 5.26727 5.65902 5.81728 5.86921 5.91057 6.11215 6.30132 6.37756 6.63164 6.95029 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.037 4.037 3 Si 0.678 3.322 4 C -0.150 4.150 5 C 0.071 3.929 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.492 3.508 9 O -0.510 6.510 10 N -0.718 5.718 11 C 0.127 3.873 12 H 0.122 0.878 13 C -0.141 4.141 14 C -0.072 4.072 15 H 0.128 0.872 16 Br -0.146 7.146 17 C -0.134 4.134 18 C 0.109 3.891 19 C -0.127 4.127 20 C -0.097 4.097 21 C -0.146 4.146 22 C -0.065 4.065 23 C -0.086 4.086 24 H 0.375 0.625 25 H 0.072 0.928 26 H -0.256 1.256 27 H -0.260 1.260 28 H 0.169 0.831 29 H 0.120 0.880 30 H 0.125 0.875 31 H 0.404 0.596 32 H 0.100 0.900 33 H 0.087 0.913 34 H 0.091 0.909 35 H 0.101 0.899 36 H 0.115 0.885 37 H 0.125 0.875 38 H 0.123 0.877 39 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.092 0.108 -0.392 6.106 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.147 4.147 3 Si 0.579 3.421 4 C -0.158 4.158 5 C -0.053 4.053 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.276 3.724 9 O -0.383 6.383 10 N -0.370 5.370 11 C 0.020 3.980 12 H 0.140 0.860 13 C -0.181 4.181 14 C -0.169 4.169 15 H 0.146 0.854 16 Br -0.065 7.065 17 C -0.173 4.173 18 C 0.005 3.995 19 C -0.148 4.148 20 C -0.116 4.116 21 C -0.165 4.165 22 C -0.084 4.084 23 C -0.090 4.090 24 H 0.222 0.778 25 H 0.090 0.910 26 H -0.180 1.180 27 H -0.185 1.185 28 H 0.186 0.814 29 H 0.138 0.862 30 H 0.142 0.858 31 H 0.240 0.760 32 H 0.118 0.882 33 H 0.106 0.894 34 H 0.109 0.891 35 H 0.120 0.880 36 H 0.133 0.867 37 H 0.143 0.857 38 H 0.141 0.859 39 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 5.524 0.969 -1.484 5.802 hybrid contribution -0.952 -0.215 0.386 1.050 sum 4.572 0.753 -1.098 4.762 Atomic orbital electron populations 1.86675 1.18271 1.79843 1.49336 1.24018 0.83893 1.09729 0.97103 0.95413 0.91458 0.74692 0.80492 1.19408 1.08157 0.91625 0.96578 1.21501 1.01277 0.93851 0.88689 1.43157 1.54087 1.04649 1.13102 1.21585 0.94440 1.06143 0.81239 1.21116 0.90914 0.76803 0.83603 1.90836 1.19901 1.46908 1.80673 1.45865 1.10664 1.73762 1.06755 1.22484 0.92727 0.96821 0.85925 0.85984 1.23794 1.04382 0.97773 0.92128 1.25918 1.01956 0.97173 0.91843 0.85354 1.97460 1.83670 1.72500 1.52919 1.23622 1.00703 0.98887 0.94100 1.18151 1.01480 0.85845 0.94039 1.19949 1.05308 0.89229 1.00285 1.20819 0.98413 0.97943 0.94457 1.20661 1.02441 0.96895 0.96475 1.20272 0.97919 0.90941 0.99223 1.18945 1.03079 0.92762 0.94214 0.77773 0.91030 1.18025 1.18487 0.81386 0.86240 0.85759 0.76049 0.88196 0.89434 0.89058 0.88029 0.86709 0.85717 0.85936 0.86090 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.74 12.86 -35.23 -0.45 -2.20 16 2 C -0.04 -0.06 3.05 36.00 0.11 0.05 16 3 Si 0.68 -0.27 30.78 -169.99 -5.23 -5.50 16 4 C -0.15 -0.51 5.61 -102.71 -0.58 -1.08 16 5 C 0.07 0.13 9.89 -16.73 -0.17 -0.03 16 6 N -0.47 -0.74 2.27 -115.71 -0.26 -1.01 16 7 C 0.09 -0.24 6.48 -5.20 -0.03 -0.27 16 8 C 0.49 -0.04 7.90 -10.99 -0.09 -0.13 16 9 O -0.51 -2.77 16.02 5.55 0.09 -2.68 16 10 N -0.72 2.26 5.36 -52.88 -0.28 1.98 16 11 C 0.13 -0.29 4.24 -66.98 -0.28 -0.58 16 12 H 0.12 -0.04 7.46 -51.93 -0.39 -0.43 16 13 C -0.14 0.33 7.53 -25.78 -0.19 0.13 16 14 C -0.07 0.17 4.87 -25.92 -0.13 0.05 16 15 H 0.13 -0.38 8.14 -51.93 -0.42 -0.80 16 16 Br -0.15 0.01 33.81 -68.01 -2.30 -2.29 16 17 C -0.13 0.48 7.46 -25.92 -0.19 0.29 16 18 C 0.11 0.40 6.80 -83.99 -0.57 -0.17 16 19 C -0.13 -0.32 10.00 -39.43 -0.39 -0.72 16 20 C -0.10 -0.21 10.01 -39.54 -0.40 -0.61 16 21 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 22 C -0.06 -0.24 10.05 -39.65 -0.40 -0.64 16 23 C -0.09 -0.40 6.35 -105.14 -0.67 -1.07 16 24 H 0.37 -0.42 8.74 45.56 0.40 -0.02 16 25 H 0.07 0.00 7.96 -51.93 -0.41 -0.41 16 26 H -0.26 -0.61 7.05 56.52 0.40 -0.21 16 27 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 28 H 0.17 -0.13 6.30 -52.49 -0.33 -0.47 16 29 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 30 H 0.12 -0.74 8.12 -51.92 -0.42 -1.16 16 31 H 0.40 -2.54 8.73 -40.82 -0.36 -2.90 16 32 H 0.10 -0.25 8.12 -51.93 -0.42 -0.67 16 33 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 34 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 35 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 36 H 0.11 0.05 8.06 -52.48 -0.42 -0.38 16 37 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 38 H 0.12 0.07 8.06 -52.49 -0.42 -0.35 16 39 H 0.12 0.30 8.06 -52.49 -0.42 -0.12 16 LS Contribution 353.80 15.07 5.33 5.33 Total: 0.00 -11.06 353.80 -12.42 -23.48 By element: Atomic # 1 Polarization: -6.62 SS G_CDS: -4.94 Total: -11.56 kcal Atomic # 6 Polarization: -1.18 SS G_CDS: -4.38 Total: -5.55 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.55 Total: 0.97 kcal Atomic # 8 Polarization: -4.51 SS G_CDS: -0.36 Total: -4.88 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.23 Total: -5.50 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.30 Total: -2.29 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -11.06 -12.42 -23.48 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17509654_9818708.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.096 kcal (2) G-P(sol) polarization free energy of solvation -11.060 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.423 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.483 kcal (6) G-S(sol) free energy of system = (1) + (5) 36.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds