Wall clock time and date at job start Tue Mar 9 2021 13:29:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52967 * 109.43487 * 2 1 4 4 C 1.53131 * 109.44485 * 178.31201 * 3 2 1 5 5 C 1.52837 * 109.22664 * 58.00441 * 4 3 2 6 6 C 1.53482 * 113.45449 * 172.62815 * 5 4 3 7 7 C 1.53546 * 83.17589 * 271.26087 * 6 5 4 8 8 N 1.46777 * 113.41494 * 73.97603 * 5 4 3 9 9 C 1.34774 * 136.09930 * 267.99244 * 8 5 4 10 10 O 1.21695 * 120.00272 * 353.74738 * 9 8 5 11 11 C 1.46680 * 120.00054 * 173.75047 * 9 8 5 12 12 C 1.37867 * 126.23655 * 179.97438 * 11 9 8 13 13 C 1.39832 * 107.08858 * 179.97438 * 12 11 9 14 14 C 1.50702 * 126.06572 * 179.73775 * 13 12 11 15 15 O 1.42898 * 109.47460 * 65.00276 * 14 13 12 16 16 Si 1.86299 * 109.46798 * 185.00174 * 14 13 12 17 17 C 1.35444 * 107.86528 * 359.97438 * 13 12 11 18 18 N 1.35533 * 108.87220 * 0.02562 * 17 13 12 19 19 C 1.52846 * 112.68543 * 303.41724 * 5 4 3 20 20 C 1.52973 * 109.43524 * 239.78539 * 2 1 3 21 21 H 1.09002 * 109.47199 * 60.00506 * 1 2 3 22 22 H 1.09006 * 109.47012 * 179.97438 * 1 2 3 23 23 H 1.08993 * 109.47226 * 299.99885 * 1 2 3 24 24 H 1.09005 * 109.40219 * 119.89576 * 2 1 3 25 25 H 1.08996 * 109.47774 * 58.32365 * 3 2 1 26 26 H 1.08999 * 109.48412 * 298.30083 * 3 2 1 27 27 H 1.09000 * 109.50814 * 298.07870 * 4 3 2 28 28 H 1.09004 * 109.55071 * 177.95598 * 4 3 2 29 29 H 1.09001 * 114.42166 * 157.71342 * 6 5 4 30 30 H 1.09008 * 114.08519 * 24.77707 * 6 5 4 31 31 H 1.09005 * 113.45317 * 219.19513 * 7 6 5 32 32 H 1.08998 * 113.45974 * 88.78110 * 7 6 5 33 33 H 1.08009 * 126.45503 * 359.95684 * 12 11 9 34 34 H 1.09001 * 109.47036 * 304.99720 * 14 13 12 35 35 H 0.96703 * 113.99620 * 180.02562 * 15 14 13 36 36 H 1.48501 * 109.99822 * 299.99484 * 16 14 13 37 37 H 1.48498 * 110.00416 * 61.31571 * 16 14 13 38 38 H 1.07998 * 125.56640 * 179.97438 * 17 13 12 39 39 H 0.97002 * 125.67858 * 179.97438 * 18 17 13 40 40 H 1.09004 * 109.51417 * 176.50619 * 19 5 4 41 41 H 1.09000 * 109.51539 * 296.66007 * 19 5 4 42 42 H 1.08997 * 109.47427 * 301.67733 * 20 2 1 43 43 H 1.08994 * 109.47190 * 61.69400 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0389 1.4425 0.0000 4 6 3.5696 1.4430 0.0425 5 6 4.1068 0.6665 -1.1594 6 6 5.6313 0.7563 -1.3129 7 6 5.2908 2.0044 -2.1399 8 7 3.9827 1.3954 -2.4273 9 6 3.0703 1.4758 -3.4160 10 8 2.1008 0.7403 -3.4106 11 6 3.2459 2.4497 -4.4986 12 6 2.3975 2.6408 -5.5684 13 6 2.9454 3.6628 -6.3499 14 6 2.3650 4.2103 -7.6283 15 8 1.1161 4.8466 -7.3503 16 14 3.5439 5.4511 -8.3640 17 6 4.0931 4.0695 -5.7568 18 7 4.2872 3.3402 -4.6310 19 6 3.5696 -0.7629 -1.2256 20 6 2.0390 -0.7260 -1.2466 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8899 24 1 1.8921 -0.5125 0.8913 25 1 1.6510 1.9648 0.8745 26 1 1.7005 1.9475 -0.9047 27 1 3.9083 0.9684 0.9635 28 1 3.9353 2.4692 0.0060 29 1 6.0747 -0.0552 -1.8899 30 1 6.1604 0.9665 -0.3833 31 1 5.9176 2.1235 -3.0237 32 1 5.2240 2.9148 -1.5442 33 1 1.4822 2.1024 -5.7658 34 1 2.2082 3.3950 -8.3346 35 1 0.6843 5.2228 -8.1295 36 1 3.7660 6.5679 -7.4107 37 1 4.8360 4.7946 -8.6872 38 1 4.7474 4.8474 -6.1217 39 1 5.0354 3.4305 -4.0203 40 1 3.9346 -1.2474 -2.1313 41 1 3.9083 -1.3200 -0.3520 42 1 1.6510 -1.7445 -1.2578 43 1 1.7003 -0.1982 -2.1381 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17514090_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:29:57 Heat of formation + Delta-G solvation = 24.562350 kcal Electronic energy + Delta-G solvation = -24595.110035 eV Core-core repulsion = 21223.019177 eV Total energy + Delta-G solvation = -3372.090857 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.162 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.76688 -41.89151 -38.90299 -37.78638 -37.53850 -33.07188 -32.12792 -31.78112 -31.05626 -30.12913 -26.84084 -26.36931 -24.63075 -23.98009 -23.28265 -21.76290 -21.20225 -20.64583 -19.57473 -18.58671 -18.26712 -17.67998 -16.98354 -16.64603 -15.82118 -15.48155 -15.40103 -15.11183 -15.08147 -14.95060 -14.80905 -14.52957 -14.27530 -14.04434 -13.96932 -13.68588 -13.44108 -13.31749 -13.21592 -12.97990 -12.49387 -12.40086 -12.32244 -12.14576 -11.93512 -11.83405 -11.44107 -11.03126 -10.88803 -10.27553 -10.11986 -9.91316 -9.81629 -9.27427 -5.00239 0.41601 1.31427 1.46616 1.61802 1.68641 1.95245 1.99263 2.38193 3.05465 3.35317 3.57430 3.61992 3.70404 3.77336 3.81228 3.92103 4.01732 4.08265 4.09733 4.21082 4.27968 4.34925 4.44773 4.50706 4.55640 4.58894 4.64340 4.69534 4.80023 4.86126 4.92485 5.01031 5.03093 5.06866 5.12120 5.15416 5.21096 5.35013 5.46748 5.53578 5.58364 5.63267 5.82136 5.97933 6.23047 6.61295 6.76026 7.32823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.087 4.087 3 C -0.111 4.111 4 C -0.115 4.115 5 C 0.167 3.833 6 C -0.145 4.145 7 C 0.085 3.915 8 N -0.639 5.639 9 C 0.620 3.380 10 O -0.506 6.506 11 C -0.050 4.050 12 C -0.074 4.074 13 C -0.163 4.163 14 C -0.036 4.036 15 O -0.547 6.547 16 Si 0.685 3.315 17 C 0.024 3.976 18 N -0.534 5.534 19 C -0.110 4.110 20 C -0.165 4.165 21 H 0.055 0.945 22 H 0.053 0.947 23 H 0.050 0.950 24 H 0.061 0.939 25 H 0.062 0.938 26 H 0.061 0.939 27 H 0.081 0.919 28 H 0.067 0.933 29 H 0.099 0.901 30 H 0.095 0.905 31 H 0.074 0.926 32 H 0.090 0.910 33 H 0.153 0.847 34 H 0.071 0.929 35 H 0.379 0.621 36 H -0.254 1.254 37 H -0.257 1.257 38 H 0.166 0.834 39 H 0.417 0.583 40 H 0.065 0.935 41 H 0.071 0.929 42 H 0.053 0.947 43 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.589 2.765 -1.121 5.474 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.105 4.105 3 C -0.148 4.148 4 C -0.154 4.154 5 C 0.083 3.917 6 C -0.183 4.183 7 C -0.038 4.038 8 N -0.374 5.374 9 C 0.412 3.588 10 O -0.383 6.383 11 C -0.162 4.162 12 C -0.100 4.100 13 C -0.170 4.170 14 C -0.148 4.148 15 O -0.353 6.353 16 Si 0.587 3.413 17 C -0.112 4.112 18 N -0.132 5.132 19 C -0.148 4.148 20 C -0.201 4.201 21 H 0.074 0.926 22 H 0.072 0.928 23 H 0.069 0.931 24 H 0.079 0.921 25 H 0.081 0.919 26 H 0.080 0.920 27 H 0.100 0.900 28 H 0.086 0.914 29 H 0.118 0.882 30 H 0.113 0.887 31 H 0.092 0.908 32 H 0.108 0.892 33 H 0.171 0.829 34 H 0.089 0.911 35 H 0.227 0.773 36 H -0.178 1.178 37 H -0.182 1.182 38 H 0.183 0.817 39 H 0.256 0.744 40 H 0.084 0.916 41 H 0.089 0.911 42 H 0.072 0.928 43 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 4.943 2.576 -0.466 5.594 hybrid contribution 0.429 -0.226 0.662 0.820 sum 5.372 2.350 0.196 5.867 Atomic orbital electron populations 1.21795 0.95284 1.01650 1.01601 1.21053 0.95606 0.95404 0.98468 1.21529 0.94120 0.97246 1.01953 1.21745 0.96973 0.99938 0.96715 1.21922 0.93165 0.93165 0.83402 1.23522 0.95648 0.97827 1.01254 1.23126 0.83351 0.98173 0.99171 1.49708 1.20445 1.46585 1.20683 1.16525 0.80908 0.81637 0.79695 1.90466 1.30065 1.42420 1.75308 1.20389 0.94152 1.00060 1.01602 1.21194 0.99061 0.97634 0.92139 1.18785 0.97136 1.01740 0.99342 1.23980 0.92661 1.01903 0.96227 1.86522 1.34770 1.76497 1.37476 0.95133 0.79387 0.80030 0.86792 1.21686 1.00446 0.99595 0.89511 1.42124 1.20948 1.29109 1.21020 1.21604 0.97563 0.93595 1.02022 1.22616 0.94036 1.01374 1.02122 0.92561 0.92777 0.93052 0.92061 0.91899 0.92045 0.90026 0.91449 0.88221 0.88688 0.90822 0.89221 0.82941 0.91084 0.77348 1.17837 1.18166 0.81673 0.74366 0.91607 0.91093 0.92833 0.84998 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.35 9.19 37.16 0.34 -0.01 16 2 C -0.09 -0.18 2.67 -90.65 -0.24 -0.42 16 3 C -0.11 -0.17 5.20 -26.68 -0.14 -0.31 16 4 C -0.12 0.06 5.22 -26.75 -0.14 -0.08 16 5 C 0.17 -0.02 0.92 -137.11 -0.13 -0.14 16 6 C -0.14 0.39 7.63 -26.20 -0.20 0.19 16 7 C 0.09 -0.23 6.68 -8.94 -0.06 -0.29 16 8 N -0.64 -0.56 3.36 -172.76 -0.58 -1.14 16 9 C 0.62 2.40 7.96 -12.85 -0.10 2.30 16 10 O -0.51 -3.33 13.24 5.19 0.07 -3.26 16 11 C -0.05 -0.16 7.02 -81.98 -0.58 -0.74 16 12 C -0.07 -0.31 10.59 -39.12 -0.41 -0.72 16 13 C -0.16 -0.47 5.46 -105.02 -0.57 -1.05 16 14 C -0.04 -0.02 3.01 36.01 0.11 0.09 16 15 O -0.55 -0.65 12.86 -35.23 -0.45 -1.11 16 16 Si 0.69 -0.91 30.60 -169.99 -5.20 -6.12 16 17 C 0.02 0.03 10.45 -16.91 -0.18 -0.14 16 18 N -0.53 -0.37 5.92 -9.39 -0.06 -0.43 16 19 C -0.11 -0.15 5.13 -26.74 -0.14 -0.29 16 20 C -0.17 -0.53 5.04 -26.68 -0.13 -0.67 16 21 H 0.06 0.20 8.14 -51.93 -0.42 -0.22 16 22 H 0.05 0.12 8.14 -51.93 -0.42 -0.30 16 23 H 0.05 0.09 8.14 -51.93 -0.42 -0.34 16 24 H 0.06 0.10 8.14 -51.93 -0.42 -0.32 16 25 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 26 H 0.06 0.23 8.14 -51.93 -0.42 -0.19 16 27 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 28 H 0.07 -0.08 7.00 -51.93 -0.36 -0.45 16 29 H 0.10 -0.25 8.13 -51.93 -0.42 -0.68 16 30 H 0.09 -0.40 8.10 -51.92 -0.42 -0.82 16 31 H 0.07 -0.29 6.90 -51.93 -0.36 -0.65 16 32 H 0.09 -0.36 7.27 -51.93 -0.38 -0.74 16 33 H 0.15 0.66 8.06 -52.48 -0.42 0.24 16 34 H 0.07 -0.05 7.96 -51.93 -0.41 -0.46 16 35 H 0.38 -1.52 8.74 45.56 0.40 -1.12 16 36 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 37 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 38 H 0.17 -0.09 6.21 -52.49 -0.33 -0.41 16 39 H 0.42 -0.92 6.10 -40.82 -0.25 -1.17 16 40 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 41 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 42 H 0.05 0.19 8.14 -51.93 -0.42 -0.23 16 43 H 0.13 0.75 3.54 -55.84 -0.20 0.55 16 LS Contribution 331.77 15.07 5.00 5.00 Total: 0.00 -7.65 331.77 -10.37 -18.02 By element: Atomic # 1 Polarization: -2.11 SS G_CDS: -6.58 Total: -8.69 kcal Atomic # 6 Polarization: 0.28 SS G_CDS: -2.57 Total: -2.29 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -0.64 Total: -1.57 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -0.38 Total: -4.36 kcal Atomic # 14 Polarization: -0.91 SS G_CDS: -5.20 Total: -6.12 kcal Total LS contribution 5.00 Total: 5.00 kcal Total: -7.65 -10.37 -18.02 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17514090_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.582 kcal (2) G-P(sol) polarization free energy of solvation -7.651 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.931 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.019 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.562 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds