Wall clock time and date at job start Tue Mar 9 2021 13:29:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52967 * 109.43487 * 2 1 4 4 C 1.53131 * 109.44485 * 178.31201 * 3 2 1 5 5 C 1.52837 * 109.22664 * 58.00441 * 4 3 2 6 6 C 1.53482 * 113.45449 * 172.62815 * 5 4 3 7 7 C 1.53546 * 83.17589 * 271.26087 * 6 5 4 8 8 N 1.46777 * 113.41494 * 73.97603 * 5 4 3 9 9 C 1.34774 * 136.09930 * 267.99244 * 8 5 4 10 10 O 1.21695 * 120.00272 * 353.74738 * 9 8 5 11 11 C 1.46680 * 120.00054 * 173.75047 * 9 8 5 12 12 C 1.37867 * 126.23655 * 179.97438 * 11 9 8 13 13 C 1.39832 * 107.08858 * 179.97438 * 12 11 9 14 14 C 1.50702 * 126.06572 * 179.73775 * 13 12 11 15 15 O 1.42898 * 109.47460 * 65.00276 * 14 13 12 16 16 Si 1.86299 * 109.46798 * 185.00174 * 14 13 12 17 17 C 1.35444 * 107.86528 * 359.97438 * 13 12 11 18 18 N 1.35533 * 108.87220 * 0.02562 * 17 13 12 19 19 C 1.52846 * 112.68543 * 303.41724 * 5 4 3 20 20 C 1.52973 * 109.43524 * 239.78539 * 2 1 3 21 21 H 1.09002 * 109.47199 * 60.00506 * 1 2 3 22 22 H 1.09006 * 109.47012 * 179.97438 * 1 2 3 23 23 H 1.08993 * 109.47226 * 299.99885 * 1 2 3 24 24 H 1.09005 * 109.40219 * 119.89576 * 2 1 3 25 25 H 1.08996 * 109.47774 * 58.32365 * 3 2 1 26 26 H 1.08999 * 109.48412 * 298.30083 * 3 2 1 27 27 H 1.09000 * 109.50814 * 298.07870 * 4 3 2 28 28 H 1.09004 * 109.55071 * 177.95598 * 4 3 2 29 29 H 1.09001 * 114.42166 * 157.71342 * 6 5 4 30 30 H 1.09008 * 114.08519 * 24.77707 * 6 5 4 31 31 H 1.09005 * 113.45317 * 219.19513 * 7 6 5 32 32 H 1.08998 * 113.45974 * 88.78110 * 7 6 5 33 33 H 1.08009 * 126.45503 * 359.95684 * 12 11 9 34 34 H 1.09001 * 109.47036 * 304.99720 * 14 13 12 35 35 H 0.96703 * 113.99620 * 180.02562 * 15 14 13 36 36 H 1.48501 * 109.99822 * 299.99484 * 16 14 13 37 37 H 1.48498 * 110.00416 * 61.31571 * 16 14 13 38 38 H 1.07998 * 125.56640 * 179.97438 * 17 13 12 39 39 H 0.97002 * 125.67858 * 179.97438 * 18 17 13 40 40 H 1.09004 * 109.51417 * 176.50619 * 19 5 4 41 41 H 1.09000 * 109.51539 * 296.66007 * 19 5 4 42 42 H 1.08997 * 109.47427 * 301.67733 * 20 2 1 43 43 H 1.08994 * 109.47190 * 61.69400 * 20 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0389 1.4425 0.0000 4 6 3.5696 1.4430 0.0425 5 6 4.1068 0.6665 -1.1594 6 6 5.6313 0.7563 -1.3129 7 6 5.2908 2.0044 -2.1399 8 7 3.9827 1.3954 -2.4273 9 6 3.0703 1.4758 -3.4160 10 8 2.1008 0.7403 -3.4106 11 6 3.2459 2.4497 -4.4986 12 6 2.3975 2.6408 -5.5684 13 6 2.9454 3.6628 -6.3499 14 6 2.3650 4.2103 -7.6283 15 8 1.1161 4.8466 -7.3503 16 14 3.5439 5.4511 -8.3640 17 6 4.0931 4.0695 -5.7568 18 7 4.2872 3.3402 -4.6310 19 6 3.5696 -0.7629 -1.2256 20 6 2.0390 -0.7260 -1.2466 21 1 -0.3634 0.5138 -0.8900 22 1 -0.3633 -1.0277 -0.0005 23 1 -0.3633 0.5138 0.8899 24 1 1.8921 -0.5125 0.8913 25 1 1.6510 1.9648 0.8745 26 1 1.7005 1.9475 -0.9047 27 1 3.9083 0.9684 0.9635 28 1 3.9353 2.4692 0.0060 29 1 6.0747 -0.0552 -1.8899 30 1 6.1604 0.9665 -0.3833 31 1 5.9176 2.1235 -3.0237 32 1 5.2240 2.9148 -1.5442 33 1 1.4822 2.1024 -5.7658 34 1 2.2082 3.3950 -8.3346 35 1 0.6843 5.2228 -8.1295 36 1 3.7660 6.5679 -7.4107 37 1 4.8360 4.7946 -8.6872 38 1 4.7474 4.8474 -6.1217 39 1 5.0354 3.4305 -4.0203 40 1 3.9346 -1.2474 -2.1313 41 1 3.9083 -1.3200 -0.3520 42 1 1.6510 -1.7445 -1.2578 43 1 1.7003 -0.1982 -2.1381 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17514090_10543058.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:29:57 Heat of formation + Delta-G solvation = 26.253833 kcal Electronic energy + Delta-G solvation = -24595.036686 eV Core-core repulsion = 21223.019177 eV Total energy + Delta-G solvation = -3372.017509 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 291.162 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.85974 -41.95387 -39.13008 -37.89564 -37.57985 -33.20118 -32.26639 -31.87898 -31.17251 -30.18755 -26.90607 -26.45256 -24.69875 -24.04452 -23.32477 -21.84797 -21.38023 -20.79025 -19.67754 -18.64695 -18.29462 -17.83206 -16.97068 -16.74583 -15.89707 -15.54170 -15.49737 -15.22363 -15.15957 -15.06674 -14.93555 -14.68677 -14.42239 -14.14270 -13.99911 -13.64882 -13.57541 -13.44180 -13.31303 -12.94560 -12.55716 -12.46720 -12.41448 -12.20442 -11.96396 -11.90302 -11.60019 -11.18680 -10.95176 -10.38461 -10.31356 -10.03965 -9.90021 -9.41383 -4.89021 0.21629 1.29222 1.39926 1.57386 1.74997 1.89641 2.02424 2.16727 3.14982 3.38777 3.59913 3.62581 3.67119 3.74783 3.81863 3.93526 4.01951 4.03996 4.13783 4.22165 4.24575 4.30276 4.38532 4.43222 4.52515 4.54472 4.60941 4.70286 4.74885 4.82846 4.84279 4.85511 4.89058 4.96722 5.00900 5.03681 5.13556 5.22433 5.27811 5.33717 5.40696 5.45678 5.61551 5.72417 6.21942 6.53523 6.99461 7.11669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.084 4.084 3 C -0.109 4.109 4 C -0.111 4.111 5 C 0.157 3.843 6 C -0.129 4.129 7 C 0.081 3.919 8 N -0.641 5.641 9 C 0.610 3.390 10 O -0.547 6.547 11 C -0.057 4.057 12 C -0.105 4.105 13 C -0.185 4.185 14 C -0.058 4.058 15 O -0.571 6.571 16 Si 0.789 3.211 17 C 0.028 3.972 18 N -0.518 5.518 19 C -0.108 4.108 20 C -0.169 4.169 21 H 0.036 0.964 22 H 0.052 0.948 23 H 0.061 0.939 24 H 0.074 0.926 25 H 0.070 0.930 26 H 0.031 0.969 27 H 0.101 0.899 28 H 0.082 0.918 29 H 0.098 0.902 30 H 0.122 0.878 31 H 0.089 0.911 32 H 0.111 0.889 33 H 0.135 0.865 34 H 0.078 0.922 35 H 0.399 0.601 36 H -0.288 1.288 37 H -0.282 1.282 38 H 0.189 0.811 39 H 0.431 0.569 40 H 0.049 0.951 41 H 0.086 0.914 42 H 0.040 0.960 43 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.954 3.989 -0.287 8.022 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.103 4.103 3 C -0.147 4.147 4 C -0.149 4.149 5 C 0.074 3.926 6 C -0.166 4.166 7 C -0.041 4.041 8 N -0.375 5.375 9 C 0.403 3.597 10 O -0.427 6.427 11 C -0.170 4.170 12 C -0.132 4.132 13 C -0.192 4.192 14 C -0.167 4.167 15 O -0.381 6.381 16 Si 0.692 3.308 17 C -0.110 4.110 18 N -0.117 5.117 19 C -0.146 4.146 20 C -0.206 4.206 21 H 0.055 0.945 22 H 0.071 0.929 23 H 0.080 0.920 24 H 0.092 0.908 25 H 0.089 0.911 26 H 0.050 0.950 27 H 0.119 0.881 28 H 0.100 0.900 29 H 0.117 0.883 30 H 0.141 0.859 31 H 0.107 0.893 32 H 0.129 0.871 33 H 0.153 0.847 34 H 0.096 0.904 35 H 0.250 0.750 36 H -0.215 1.215 37 H -0.209 1.209 38 H 0.206 0.794 39 H 0.274 0.726 40 H 0.068 0.932 41 H 0.105 0.895 42 H 0.059 0.941 43 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 7.327 3.799 0.383 8.262 hybrid contribution -0.358 -0.650 0.427 0.856 sum 6.968 3.149 0.810 7.690 Atomic orbital electron populations 1.21798 0.95976 1.01437 1.01090 1.21041 0.95108 0.95960 0.98176 1.21488 0.96103 0.96323 1.00758 1.21762 0.95010 1.00955 0.97162 1.22170 0.95276 0.92032 0.83171 1.23494 0.93279 0.97520 1.02353 1.23453 0.81369 0.99043 1.00226 1.49839 1.20860 1.46582 1.20180 1.16689 0.81025 0.81504 0.80507 1.90465 1.31885 1.43973 1.76411 1.20347 0.94801 1.00527 1.01352 1.21257 0.99327 0.98909 0.93674 1.19220 0.97863 1.01660 1.00445 1.24418 0.93361 1.03423 0.95511 1.86466 1.35383 1.76791 1.39429 0.93860 0.76162 0.76191 0.84572 1.22031 1.00149 0.99541 0.89245 1.42056 1.20601 1.28016 1.21012 1.21574 0.95976 0.95147 1.01879 1.22559 0.95795 1.00367 1.01831 0.94515 0.92861 0.92017 0.90806 0.91149 0.94964 0.88086 0.89976 0.88349 0.85934 0.89271 0.87065 0.84747 0.90434 0.75002 1.21527 1.20857 0.79443 0.72607 0.93204 0.89549 0.94082 0.87382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.98 9.19 71.98 0.66 -0.32 16 2 C -0.08 -0.45 2.67 -10.82 -0.03 -0.48 16 3 C -0.11 -0.39 5.20 30.63 0.16 -0.24 16 4 C -0.11 0.27 5.22 30.58 0.16 0.43 16 5 C 0.16 -0.13 0.92 0.03 0.00 -0.13 16 6 C -0.13 0.99 7.63 30.94 0.24 1.23 16 7 C 0.08 -0.58 6.68 82.87 0.55 -0.03 16 8 N -0.64 -1.34 3.36 -818.71 -2.75 -4.09 16 9 C 0.61 6.14 7.96 86.45 0.69 6.83 16 10 O -0.55 -9.40 13.24 -4.33 -0.06 -9.46 16 11 C -0.06 -0.48 7.02 40.35 0.28 -0.20 16 12 C -0.10 -1.19 10.59 22.57 0.24 -0.95 16 13 C -0.19 -1.32 5.46 -20.12 -0.11 -1.43 16 14 C -0.06 -0.11 3.01 71.24 0.21 0.10 16 15 O -0.57 -1.94 12.86 -148.98 -1.92 -3.85 16 16 Si 0.79 -2.62 30.60 68.60 2.10 -0.52 16 17 C 0.03 0.08 10.45 83.48 0.87 0.95 16 18 N -0.52 -0.75 5.92 -183.63 -1.09 -1.84 16 19 C -0.11 -0.38 5.13 30.59 0.16 -0.22 16 20 C -0.17 -1.48 5.04 30.63 0.15 -1.32 16 21 H 0.04 0.38 8.14 -2.39 -0.02 0.36 16 22 H 0.05 0.34 8.14 -2.38 -0.02 0.32 16 23 H 0.06 0.27 8.14 -2.39 -0.02 0.25 16 24 H 0.07 0.21 8.14 -2.38 -0.02 0.19 16 25 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 26 H 0.03 0.31 8.14 -2.39 -0.02 0.29 16 27 H 0.10 -0.58 8.14 -2.39 -0.02 -0.60 16 28 H 0.08 -0.41 7.00 -2.38 -0.02 -0.42 16 29 H 0.10 -0.68 8.13 -2.39 -0.02 -0.70 16 30 H 0.12 -1.53 8.10 -2.38 -0.02 -1.55 16 31 H 0.09 -0.90 6.90 -2.38 -0.02 -0.92 16 32 H 0.11 -1.23 7.27 -2.39 -0.02 -1.24 16 33 H 0.13 1.82 8.06 -2.91 -0.02 1.80 16 34 H 0.08 -0.02 7.96 -2.39 -0.02 -0.04 16 35 H 0.40 -3.04 8.74 -74.06 -0.65 -3.69 16 36 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 37 H -0.28 -0.22 7.11 99.48 0.71 0.48 16 38 H 0.19 -0.41 6.21 -2.91 -0.02 -0.43 16 39 H 0.43 -2.40 6.10 -92.71 -0.57 -2.97 16 40 H 0.05 0.32 8.14 -2.38 -0.02 0.30 16 41 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 42 H 0.04 0.41 8.14 -2.39 -0.02 0.39 16 43 H 0.11 1.64 3.54 -64.33 -0.23 1.41 16 Total: 0.00 -22.35 331.77 0.16 -22.19 By element: Atomic # 1 Polarization: -6.28 SS G_CDS: -0.37 Total: -6.65 kcal Atomic # 6 Polarization: -0.03 SS G_CDS: 4.24 Total: 4.21 kcal Atomic # 7 Polarization: -2.09 SS G_CDS: -3.83 Total: -5.93 kcal Atomic # 8 Polarization: -11.34 SS G_CDS: -1.97 Total: -13.31 kcal Atomic # 14 Polarization: -2.62 SS G_CDS: 2.10 Total: -0.52 kcal Total: -22.35 0.16 -22.19 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17514090_10543058.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.445 kcal (2) G-P(sol) polarization free energy of solvation -22.354 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.163 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.191 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.254 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds