Wall clock time and date at job start Tue Mar 9 2021 13:30:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35449 * 125.56556 * 2 1 4 4 C 1.50708 * 126.06495 * 0.05787 * 3 2 1 5 5 O 1.42905 * 109.46794 * 124.98110 * 4 3 2 6 6 Si 1.86297 * 109.46960 * 244.98140 * 4 3 2 7 7 C 1.39839 * 107.86785 * 179.77951 * 3 2 1 8 8 C 1.50692 * 126.45926 * 180.29976 * 7 3 2 9 9 C 1.37873 * 107.08303 * 0.41979 * 7 3 2 10 10 C 1.46674 * 126.23099 * 179.85064 * 9 7 3 11 11 O 1.21687 * 120.00256 * 359.70807 * 10 9 7 12 12 N 1.34777 * 119.99637 * 179.71474 * 10 9 7 13 13 C 1.47119 * 136.10321 * 354.21669 * 12 10 9 14 14 C 1.53540 * 88.05112 * 153.13075 * 13 12 10 15 15 C 1.46787 * 136.09703 * 174.21726 * 12 10 9 16 16 C 1.52842 * 113.40683 * 321.83223 * 15 12 10 17 17 C 1.53120 * 109.27125 * 73.95694 * 16 15 12 18 18 C 1.53071 * 109.38940 * 57.97756 * 17 16 15 19 19 C 1.53001 * 109.42318 * 178.33685 * 18 17 16 20 20 C 1.52972 * 109.70799 * 298.40863 * 18 17 16 21 21 C 1.52846 * 113.41665 * 92.03031 * 15 12 10 22 22 N 1.35532 * 125.56474 * 180.02562 * 2 1 3 23 23 H 1.09006 * 109.46824 * 274.99403 * 1 2 3 24 24 H 1.08993 * 109.47265 * 34.99335 * 1 2 3 25 25 H 1.09004 * 109.46920 * 154.99812 * 1 2 3 26 26 H 1.08993 * 109.46990 * 4.98125 * 4 3 2 27 27 H 0.96699 * 113.99744 * 180.02562 * 5 4 3 28 28 H 1.48501 * 109.99870 * 294.98516 * 6 4 3 29 29 H 1.48489 * 110.00314 * 56.30804 * 6 4 3 30 30 H 1.08994 * 109.47521 * 270.16786 * 8 7 3 31 31 H 1.09003 * 109.47428 * 30.16602 * 8 7 3 32 32 H 1.09000 * 109.47528 * 150.16298 * 8 7 3 33 33 H 1.09003 * 113.45709 * 267.93338 * 13 12 10 34 34 H 1.09005 * 113.45679 * 38.32959 * 13 12 10 35 35 H 1.09004 * 114.21972 * 272.26516 * 14 13 12 36 36 H 1.08999 * 114.22259 * 139.39520 * 14 13 12 37 37 H 1.08998 * 109.51211 * 193.91110 * 16 15 12 38 38 H 1.08999 * 109.51136 * 314.00643 * 16 15 12 39 39 H 1.08991 * 109.47987 * 178.02162 * 17 16 15 40 40 H 1.09008 * 109.47235 * 298.03569 * 17 16 15 41 41 H 1.08995 * 109.42667 * 58.48574 * 18 17 16 42 42 H 1.08994 * 109.47544 * 180.23803 * 19 18 17 43 43 H 1.09003 * 109.46978 * 300.24154 * 19 18 17 44 44 H 1.09005 * 109.47042 * 60.23904 * 19 18 17 45 45 H 1.09002 * 109.48079 * 301.63304 * 20 18 17 46 46 H 1.09007 * 109.47915 * 181.61884 * 20 18 17 47 47 H 1.09000 * 109.51352 * 45.94574 * 21 15 12 48 48 H 1.09000 * 109.51250 * 166.05168 * 21 15 12 49 49 H 0.97003 * 125.67872 * 359.93535 * 22 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1018 0.0000 4 6 1.8199 2.5321 0.0012 5 8 2.4038 3.2269 1.1051 6 14 2.3279 3.3564 -1.5903 7 6 3.6270 0.6767 0.0051 8 6 4.8485 1.5591 0.0133 9 6 3.6123 -0.7019 -0.0015 10 6 4.7861 -1.5814 -0.0025 11 8 5.9049 -1.1030 -0.0025 12 7 4.6253 -2.9196 -0.0035 13 6 3.4913 -3.8512 0.0988 14 6 4.3232 -4.8686 -0.6952 15 6 5.5047 -4.0904 -0.1072 16 6 6.6575 -3.8985 -1.0921 17 6 7.6998 -2.9625 -0.4740 18 6 8.1928 -3.5538 0.8490 19 6 9.2644 -2.6398 1.4468 20 6 7.0233 -3.6747 1.8276 21 6 5.9697 -4.6227 1.2480 22 7 2.2953 -1.1025 -0.0005 23 1 -0.3633 0.0895 1.0238 24 1 -0.3633 0.8418 -0.5893 25 1 -0.3633 -0.9314 -0.4344 26 1 0.7339 2.5542 0.0914 27 1 2.1413 4.1554 1.1687 28 1 3.8084 3.4409 -1.6685 29 1 1.8009 2.5919 -2.7491 30 1 5.1462 1.7772 -1.0123 31 1 4.6204 2.4907 0.5312 32 1 5.6627 1.0479 0.5270 33 1 3.2798 -4.1667 1.1206 34 1 2.6012 -3.5110 -0.4304 35 1 4.2238 -4.7803 -1.7771 36 1 4.2392 -5.8937 -0.3345 37 1 7.1168 -4.8633 -1.3075 38 1 6.2782 -3.4616 -2.0159 39 1 8.5401 -2.8511 -1.1592 40 1 7.2489 -1.9872 -0.2904 41 1 8.6184 -4.5408 0.6687 42 1 9.6191 -3.0623 2.3869 43 1 10.0981 -2.5532 0.7499 44 1 8.8395 -1.6528 1.6295 45 1 6.5795 -2.6919 1.9869 46 1 7.3836 -4.0691 2.7777 47 1 5.1193 -4.6811 1.9275 48 1 6.4025 -5.6149 1.1204 49 1 1.9834 -2.0210 0.0000 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17514090_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:30:11 Heat of formation + Delta-G solvation = 13.467635 kcal Electronic energy + Delta-G solvation = -29203.824848 eV Core-core repulsion = 25520.177650 eV Total energy + Delta-G solvation = -3683.647198 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.193 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -42.85700 -41.98167 -38.91291 -37.79077 -37.53870 -33.83458 -33.31933 -32.03631 -31.77525 -30.68588 -29.23530 -27.30727 -26.78273 -26.19797 -24.21918 -23.28393 -23.05351 -21.29733 -20.83060 -19.90977 -19.38088 -18.40345 -18.22645 -17.38669 -16.97438 -16.65624 -16.00239 -15.56437 -15.45467 -15.12885 -15.06998 -14.82031 -14.74218 -14.62701 -14.34475 -13.99323 -13.95174 -13.86021 -13.72140 -13.59806 -13.38435 -13.21807 -13.17332 -13.01957 -12.96569 -12.55112 -12.46695 -12.32109 -12.27720 -12.10413 -11.85273 -11.60995 -11.33201 -11.01290 -10.86904 -10.48120 -10.06951 -9.76965 -9.44056 -8.95314 -4.85970 0.44372 1.25371 1.63147 1.67372 1.84192 1.98465 2.23812 2.40750 3.07078 3.35356 3.54161 3.66009 3.69668 3.72900 3.79294 3.85842 4.02097 4.04174 4.10905 4.18750 4.23982 4.32735 4.35344 4.42635 4.45672 4.49959 4.52324 4.56147 4.60516 4.65032 4.70976 4.77518 4.80486 4.93818 4.98561 5.04747 5.06391 5.09887 5.12625 5.16857 5.22502 5.36643 5.39750 5.43641 5.48210 5.54952 5.60204 5.75046 5.95549 6.03192 6.32137 6.65492 6.79732 7.37207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C 0.075 3.925 3 C -0.170 4.170 4 C -0.023 4.023 5 O -0.544 6.544 6 Si 0.666 3.334 7 C -0.043 4.043 8 C -0.097 4.097 9 C -0.060 4.060 10 C 0.621 3.379 11 O -0.505 6.505 12 N -0.640 5.640 13 C 0.091 3.909 14 C -0.147 4.147 15 C 0.168 3.832 16 C -0.111 4.111 17 C -0.166 4.166 18 C -0.084 4.084 19 C -0.145 4.145 20 C -0.111 4.111 21 C -0.115 4.115 22 N -0.536 5.536 23 H 0.083 0.917 24 H 0.087 0.913 25 H 0.069 0.931 26 H 0.067 0.933 27 H 0.379 0.621 28 H -0.246 1.246 29 H -0.264 1.264 30 H 0.062 0.938 31 H 0.077 0.923 32 H 0.082 0.918 33 H 0.092 0.908 34 H 0.068 0.932 35 H 0.098 0.902 36 H 0.095 0.905 37 H 0.071 0.929 38 H 0.063 0.937 39 H 0.051 0.949 40 H 0.134 0.866 41 H 0.059 0.941 42 H 0.050 0.950 43 H 0.052 0.948 44 H 0.056 0.944 45 H 0.064 0.936 46 H 0.061 0.939 47 H 0.067 0.933 48 H 0.080 0.920 49 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.556 -1.568 -0.139 6.742 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C -0.044 4.044 3 C -0.177 4.177 4 C -0.134 4.134 5 O -0.350 6.350 6 Si 0.566 3.434 7 C -0.052 4.052 8 C -0.154 4.154 9 C -0.171 4.171 10 C 0.414 3.586 11 O -0.382 6.382 12 N -0.376 5.376 13 C -0.032 4.032 14 C -0.184 4.184 15 C 0.085 3.915 16 C -0.149 4.149 17 C -0.202 4.202 18 C -0.103 4.103 19 C -0.203 4.203 20 C -0.148 4.148 21 C -0.153 4.153 22 N -0.136 5.136 23 H 0.102 0.898 24 H 0.106 0.894 25 H 0.088 0.912 26 H 0.085 0.915 27 H 0.226 0.774 28 H -0.170 1.170 29 H -0.190 1.190 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.100 0.900 33 H 0.110 0.890 34 H 0.086 0.914 35 H 0.117 0.883 36 H 0.114 0.886 37 H 0.089 0.911 38 H 0.082 0.918 39 H 0.070 0.930 40 H 0.151 0.849 41 H 0.078 0.922 42 H 0.069 0.931 43 H 0.071 0.929 44 H 0.075 0.925 45 H 0.083 0.917 46 H 0.080 0.920 47 H 0.085 0.915 48 H 0.098 0.902 49 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges -5.197 -1.918 -0.795 5.597 hybrid contribution -0.352 -1.252 0.279 1.331 sum -5.550 -3.170 -0.516 6.412 Atomic orbital electron populations 1.20506 0.87124 1.03790 1.03795 1.20300 0.93700 0.85616 1.04761 1.18458 0.92523 0.92703 1.13990 1.23852 0.98862 0.91135 0.99586 1.86514 1.72538 1.27204 1.48700 0.96627 0.83226 0.88106 0.75439 1.19817 0.95025 0.90813 0.99506 1.20504 0.94204 0.98614 1.02056 1.20024 0.82733 0.93700 1.20673 1.16483 0.87332 0.79109 0.75678 1.90425 1.23199 1.73140 1.51426 1.49715 1.11376 1.03133 1.73335 1.23087 0.90968 0.88311 1.00881 1.23492 0.95236 0.98681 1.01029 1.21847 0.92090 0.81876 0.95730 1.21632 0.95497 1.00596 0.97180 1.22637 0.98206 1.04046 0.95288 1.21028 0.95065 0.98742 0.95415 1.21790 0.98288 0.99974 1.00232 1.21532 0.95497 0.99727 0.98080 1.21738 0.99406 0.99661 0.94535 1.42166 1.05468 1.08417 1.57512 0.89794 0.89445 0.91184 0.91484 0.77391 1.17039 1.18954 0.91900 0.90415 0.89973 0.89037 0.91432 0.88345 0.88637 0.91057 0.91826 0.92993 0.84931 0.92208 0.93103 0.92886 0.92478 0.91679 0.92050 0.91473 0.90177 0.74449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.20 9.90 36.01 0.36 0.56 16 2 C 0.07 0.11 7.13 -81.95 -0.58 -0.48 16 3 C -0.17 -0.57 4.49 -105.02 -0.47 -1.04 16 4 C -0.02 -0.02 2.76 36.01 0.10 0.08 16 5 O -0.54 -0.59 11.55 -35.23 -0.41 -0.99 16 6 Si 0.67 0.36 31.70 -169.99 -5.39 -5.03 16 7 C -0.04 -0.22 5.87 -104.16 -0.61 -0.83 16 8 C -0.10 -0.51 8.19 36.00 0.29 -0.22 16 9 C -0.06 -0.25 7.02 -81.98 -0.58 -0.82 16 10 C 0.62 2.71 7.90 -12.86 -0.10 2.61 16 11 O -0.50 -3.33 10.94 5.20 0.06 -3.27 16 12 N -0.64 -0.82 3.36 -172.92 -0.58 -1.40 16 13 C 0.09 -0.21 7.20 -8.95 -0.06 -0.27 16 14 C -0.15 0.36 7.61 -26.34 -0.20 0.16 16 15 C 0.17 0.03 0.91 -137.24 -0.12 -0.09 16 16 C -0.11 -0.18 5.19 -26.75 -0.14 -0.32 16 17 C -0.17 -0.56 5.06 -26.63 -0.13 -0.70 16 18 C -0.08 -0.20 2.67 -90.60 -0.24 -0.44 16 19 C -0.15 -0.39 9.19 37.16 0.34 -0.05 16 20 C -0.11 -0.21 5.20 -26.68 -0.14 -0.35 16 21 C -0.12 0.02 5.22 -26.75 -0.14 -0.12 16 22 N -0.54 -0.64 5.92 -5.70 -0.03 -0.68 16 23 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 24 H 0.09 -0.26 7.42 -51.93 -0.39 -0.64 16 25 H 0.07 -0.25 8.14 -51.93 -0.42 -0.67 16 26 H 0.07 -0.10 6.76 -51.93 -0.35 -0.45 16 27 H 0.38 -1.51 8.74 45.56 0.40 -1.11 16 28 H -0.25 -0.95 6.27 56.52 0.35 -0.59 16 29 H -0.26 -0.96 7.11 56.52 0.40 -0.56 16 30 H 0.06 0.35 7.66 -51.93 -0.40 -0.05 16 31 H 0.08 0.38 6.69 -51.93 -0.35 0.03 16 32 H 0.08 0.51 6.49 -51.93 -0.34 0.17 16 33 H 0.09 -0.31 7.29 -51.93 -0.38 -0.69 16 34 H 0.07 -0.25 6.03 -51.93 -0.31 -0.56 16 35 H 0.10 -0.23 8.12 -51.93 -0.42 -0.65 16 36 H 0.10 -0.39 8.10 -51.93 -0.42 -0.81 16 37 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 38 H 0.06 0.16 8.14 -51.93 -0.42 -0.26 16 39 H 0.05 0.19 8.14 -51.93 -0.42 -0.23 16 40 H 0.13 0.76 3.50 -55.76 -0.20 0.57 16 41 H 0.06 0.11 8.14 -51.93 -0.42 -0.31 16 42 H 0.05 0.10 8.14 -51.93 -0.42 -0.32 16 43 H 0.05 0.13 8.14 -51.93 -0.42 -0.29 16 44 H 0.06 0.22 8.14 -51.93 -0.42 -0.20 16 45 H 0.06 0.28 7.78 -51.93 -0.40 -0.13 16 46 H 0.06 0.09 8.14 -51.92 -0.42 -0.34 16 47 H 0.07 -0.06 7.02 -51.93 -0.36 -0.42 16 48 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 49 H 0.41 -0.68 5.75 -40.82 -0.23 -0.91 16 LS Contribution 365.23 15.07 5.50 5.50 Total: 0.00 -7.86 365.23 -11.33 -19.19 By element: Atomic # 1 Polarization: -2.94 SS G_CDS: -8.05 Total: -10.99 kcal Atomic # 6 Polarization: 0.11 SS G_CDS: -2.43 Total: -2.33 kcal Atomic # 7 Polarization: -1.46 SS G_CDS: -0.61 Total: -2.08 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -0.35 Total: -4.27 kcal Atomic # 14 Polarization: 0.36 SS G_CDS: -5.39 Total: -5.03 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -7.86 -11.33 -19.19 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17514090_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.654 kcal (2) G-P(sol) polarization free energy of solvation -7.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.330 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.186 kcal (6) G-S(sol) free energy of system = (1) + (5) 13.468 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds