Wall clock time and date at job start Tue Mar 9 2021 13:37:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86299 * 109.47279 * 2 1 4 4 C 1.50705 * 109.47055 * 240.00495 * 2 1 3 5 5 C 1.38239 * 119.97314 * 119.99822 * 4 2 1 6 6 C 1.38291 * 120.11178 * 179.97438 * 5 4 2 7 7 C 1.38131 * 120.05500 * 0.04016 * 6 5 4 8 8 C 1.38752 * 119.94206 * 359.97438 * 7 6 5 9 9 O 1.35899 * 120.05305 * 180.02562 * 8 7 6 10 10 C 1.42895 * 117.00109 * 359.97438 * 9 8 7 11 11 C 1.52997 * 109.47137 * 180.02562 * 10 9 8 12 12 C 1.50707 * 109.47187 * 180.02562 * 11 10 9 13 13 O 1.21279 * 119.99854 * 359.97438 * 12 11 10 14 14 N 1.34771 * 119.99931 * 180.02562 * 12 11 10 15 15 C 1.46500 * 120.00354 * 180.02562 * 14 12 11 16 16 H 1.09005 * 112.84764 * 23.79875 * 15 14 12 17 17 C 1.53772 * 113.62001 * 154.99759 * 15 14 12 18 18 C 1.53784 * 87.08274 * 89.11805 * 17 15 14 19 19 H 1.09004 * 113.60985 * 270.79995 * 18 17 15 20 20 C 1.52997 * 113.61394 * 139.98262 * 18 17 15 21 21 N 1.47317 * 110.59824 * 180.02562 * 20 18 17 22 22 C 1.34527 * 106.61579 * 241.70024 * 21 20 18 23 23 O 1.21542 * 123.76861 * 179.76750 * 22 21 20 24 24 N 1.33785 * 112.46096 * 359.60545 * 22 21 20 25 25 C 1.34771 * 111.64603 * 0.41435 * 24 22 21 26 26 O 1.21225 * 127.16082 * 179.72976 * 25 24 22 27 27 C 1.53778 * 87.07838 * 25.43212 * 18 17 15 28 28 C 1.38164 * 119.96970 * 300.29658 * 4 2 1 29 29 H 0.96704 * 114.00321 * 59.99538 * 1 2 3 30 30 H 1.08994 * 109.47433 * 119.99964 * 2 1 3 31 31 H 1.48500 * 110.00096 * 298.68627 * 3 2 1 32 32 H 1.48504 * 109.99756 * 60.00099 * 3 2 1 33 33 H 1.08002 * 119.94713 * 0.02562 * 5 4 2 34 34 H 1.08001 * 119.97215 * 180.02562 * 6 5 4 35 35 H 1.07997 * 120.02784 * 179.97438 * 7 6 5 36 36 H 1.09001 * 109.47219 * 60.00183 * 10 9 8 37 37 H 1.09004 * 109.47101 * 299.99772 * 10 9 8 38 38 H 1.08996 * 109.47518 * 59.99571 * 11 10 9 39 39 H 1.09000 * 109.47415 * 299.99610 * 11 10 9 40 40 H 0.97007 * 120.00489 * 359.97438 * 14 12 11 41 41 H 1.09005 * 113.61593 * 334.56891 * 17 15 14 42 42 H 1.09005 * 113.61591 * 203.66545 * 17 15 14 43 43 H 1.08998 * 110.53647 * 302.82831 * 20 18 17 44 44 H 0.97001 * 126.68790 * 61.42942 * 21 20 18 45 45 H 0.97002 * 124.18257 * 180.13665 * 24 22 21 46 46 H 1.09007 * 113.61396 * 89.12292 * 27 18 17 47 47 H 1.09000 * 113.61152 * 220.01871 * 27 18 17 48 48 H 1.08001 * 120.03219 * 0.02562 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 -1.2306 5 6 2.7260 -0.0379 -2.1401 6 6 3.1889 -0.6871 -3.2700 7 6 2.8575 -2.0094 -3.4928 8 6 2.0597 -2.6864 -2.5815 9 8 1.7326 -3.9875 -2.7982 10 6 2.2445 -4.5960 -3.9855 11 6 1.7737 -6.0500 -4.0570 12 6 2.3140 -6.6920 -5.3089 13 8 3.0069 -6.0496 -6.0692 14 7 2.0263 -7.9796 -5.5840 15 6 2.5519 -8.6039 -6.8006 16 1 3.4514 -8.1137 -7.1732 17 6 2.6795 -10.1332 -6.7026 18 6 1.2348 -10.2084 -7.2244 19 1 0.4837 -10.1841 -6.4348 20 6 1.0042 -11.3387 -8.2293 21 7 -0.3968 -11.3495 -8.6848 22 6 -0.9138 -12.5338 -8.3110 23 8 -2.0614 -12.8692 -8.5295 24 7 -0.0227 -13.3026 -7.6749 25 6 1.1718 -12.6890 -7.5611 26 8 2.1721 -13.1257 -7.0334 27 6 1.4845 -8.8409 -7.8819 28 6 1.5921 -2.0313 -1.4518 29 1 -0.3934 0.4418 -0.7650 30 1 1.7923 -0.5138 0.8899 31 1 1.5878 2.4586 -1.2242 32 1 1.5615 2.4678 1.2086 33 1 2.9864 0.9960 -1.9677 34 1 3.8100 -0.1597 -3.9789 35 1 3.2189 -2.5158 -4.3756 36 1 3.3339 -4.5669 -3.9681 37 1 1.8804 -4.0533 -4.8579 38 1 0.6843 -6.0788 -4.0746 39 1 2.1374 -6.5931 -3.1847 40 1 1.4718 -8.4933 -4.9760 41 1 2.7945 -10.4973 -5.6816 42 1 3.4140 -10.5550 -7.3888 43 1 1.6820 -11.2407 -9.0773 44 1 -0.8577 -10.6392 -9.1581 45 1 -0.2138 -14.1904 -7.3339 46 1 1.8923 -8.9093 -8.8905 47 1 0.6348 -8.1616 -7.8130 48 1 0.9669 -2.5547 -0.7436 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:56 Heat of formation + Delta-G solvation = -90.757215 kcal Electronic energy + Delta-G solvation = -32576.650403 eV Core-core repulsion = 27793.408006 eV Total energy + Delta-G solvation = -4783.242397 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -43.58355 -41.58062 -41.17226 -39.94529 -39.53742 -39.03936 -37.35045 -37.24008 -35.20419 -34.26969 -33.23016 -32.45213 -30.85938 -29.61082 -27.13978 -27.03339 -25.96689 -24.83209 -23.83340 -23.65691 -22.71379 -22.28508 -21.60931 -20.72344 -19.56001 -19.37122 -18.35006 -18.06493 -17.91256 -17.65768 -17.55230 -17.30391 -17.17813 -17.05659 -16.78052 -16.58196 -16.26194 -16.09039 -16.04526 -15.63691 -15.48391 -15.26478 -14.96965 -14.79446 -14.45753 -14.29406 -14.17142 -14.06380 -13.76846 -13.59862 -13.24326 -12.98804 -12.87314 -12.85515 -12.40168 -12.36868 -11.98763 -11.93810 -11.85431 -11.83165 -11.55612 -11.52442 -11.25021 -11.12179 -10.68613 -10.65313 -10.31603 -9.90263 -9.23431 -4.94550 0.22977 0.40931 0.42646 1.23615 1.27194 1.38555 1.57144 1.61598 1.85672 1.93015 1.96671 2.35766 2.62395 2.69036 3.06161 3.27229 3.33735 3.37269 3.42044 3.52923 3.53550 3.62780 3.75940 3.78490 3.87975 3.99112 4.05728 4.14893 4.21110 4.24402 4.32409 4.37527 4.41462 4.51848 4.53162 4.57906 4.58991 4.63192 4.69195 4.70020 4.82028 4.87120 4.99203 5.28080 5.30138 5.39555 5.45947 5.56246 5.69592 5.73780 6.19244 6.19833 6.37335 6.40159 6.96056 6.97908 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.689 3.311 4 C -0.081 4.081 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.132 3.868 9 O -0.316 6.316 10 C 0.075 3.925 11 C -0.142 4.142 12 C 0.525 3.475 13 O -0.534 6.534 14 N -0.713 5.713 15 C 0.120 3.880 16 H 0.111 0.889 17 C -0.131 4.131 18 C -0.117 4.117 19 H 0.103 0.897 20 C 0.102 3.898 21 N -0.721 5.721 22 C 0.703 3.297 23 O -0.540 6.540 24 N -0.681 5.681 25 C 0.528 3.472 26 O -0.458 6.458 27 C -0.141 4.141 28 C -0.126 4.126 29 H 0.376 0.624 30 H 0.120 0.880 31 H -0.260 1.260 32 H -0.257 1.257 33 H 0.129 0.871 34 H 0.131 0.869 35 H 0.132 0.868 36 H 0.074 0.926 37 H 0.072 0.928 38 H 0.108 0.892 39 H 0.109 0.891 40 H 0.404 0.596 41 H 0.083 0.917 42 H 0.107 0.893 43 H 0.133 0.867 44 H 0.443 0.557 45 H 0.435 0.565 46 H 0.100 0.900 47 H 0.079 0.921 48 H 0.134 0.866 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.913 0.445 -1.163 3.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.186 4.186 3 Si 0.590 3.410 4 C -0.081 4.081 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.087 3.913 9 O -0.230 6.230 10 C -0.001 4.001 11 C -0.182 4.182 12 C 0.311 3.689 13 O -0.410 6.410 14 N -0.365 5.365 15 C 0.014 3.986 16 H 0.129 0.871 17 C -0.170 4.170 18 C -0.137 4.137 19 H 0.121 0.879 20 C -0.007 4.007 21 N -0.386 5.386 22 C 0.402 3.598 23 O -0.413 6.413 24 N -0.352 5.352 25 C 0.313 3.687 26 O -0.327 6.327 27 C -0.180 4.180 28 C -0.144 4.144 29 H 0.224 0.776 30 H 0.138 0.862 31 H -0.185 1.185 32 H -0.182 1.182 33 H 0.146 0.854 34 H 0.149 0.851 35 H 0.150 0.850 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.126 0.874 39 H 0.127 0.873 40 H 0.239 0.761 41 H 0.101 0.899 42 H 0.125 0.875 43 H 0.150 0.850 44 H 0.287 0.713 45 H 0.277 0.723 46 H 0.118 0.882 47 H 0.098 0.902 48 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges 3.145 0.949 -0.904 3.407 hybrid contribution -1.591 -0.721 -0.578 1.839 sum 1.555 0.228 -1.482 2.160 Atomic orbital electron populations 1.86603 1.17573 1.79995 1.49321 1.25078 0.84066 1.11100 0.98315 0.94890 0.91749 0.74192 0.80203 1.20074 0.97655 0.93858 0.96531 1.20931 1.00805 1.00014 0.95451 1.20933 0.97818 0.93693 0.96677 1.21396 1.03113 0.96495 1.01059 1.18952 0.94688 0.83157 0.94527 1.85974 1.71201 1.22788 1.43056 1.22407 0.99397 0.91993 0.86311 1.21473 1.03930 0.95525 0.97280 1.20305 0.79965 0.81708 0.86894 1.90760 1.37781 1.62408 1.50058 1.45636 1.53805 1.12202 1.24809 1.21833 0.97943 0.93594 0.85216 0.87093 1.23340 0.95459 0.94676 1.03522 1.22930 0.99309 0.93641 0.97783 0.87887 1.22193 0.85461 0.94094 0.98996 1.45542 1.12464 1.18503 1.62079 1.15883 0.84238 0.81388 0.78309 1.91105 1.15612 1.75182 1.59378 1.44361 1.13493 1.21359 1.55994 1.20779 0.82554 0.86985 0.78426 1.90879 1.30320 1.70573 1.40891 1.23501 1.00102 0.95064 0.99328 1.20239 1.03062 0.93996 0.97125 0.77598 0.86191 1.18492 1.18218 0.85386 0.85139 0.84973 0.90825 0.90946 0.87406 0.87318 0.76149 0.89853 0.87488 0.84993 0.71252 0.72281 0.88187 0.90219 0.84824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.79 12.76 -35.23 -0.45 -1.24 16 2 C -0.08 0.00 2.82 36.01 0.10 0.10 16 3 Si 0.69 -0.59 29.79 -169.99 -5.06 -5.65 16 4 C -0.08 -0.06 5.39 -104.65 -0.56 -0.62 16 5 C -0.15 0.01 8.67 -39.56 -0.34 -0.34 16 6 C -0.07 0.00 10.04 -39.60 -0.40 -0.40 16 7 C -0.20 -0.17 9.04 -39.43 -0.36 -0.53 16 8 C 0.13 0.24 6.69 -39.22 -0.26 -0.02 16 9 O -0.32 -0.44 10.14 -19.42 -0.20 -0.64 16 10 C 0.07 -0.03 4.03 37.16 0.15 0.12 16 11 C -0.14 0.39 6.07 -27.88 -0.17 0.22 16 12 C 0.52 -0.61 7.83 -10.98 -0.09 -0.70 16 13 O -0.53 -1.48 15.58 5.56 0.09 -1.40 16 14 N -0.71 2.59 5.26 -53.02 -0.28 2.31 16 15 C 0.12 -0.43 4.32 -67.12 -0.29 -0.72 16 16 H 0.11 -0.20 7.47 -51.93 -0.39 -0.59 16 17 C -0.13 0.60 6.65 -25.92 -0.17 0.42 16 18 C -0.12 0.61 3.36 -89.81 -0.30 0.31 16 19 H 0.10 -0.53 8.14 -51.93 -0.42 -0.96 16 20 C 0.10 -0.47 3.44 -68.20 -0.23 -0.70 16 21 N -0.72 2.69 6.24 -59.19 -0.37 2.32 16 22 C 0.70 -0.24 8.99 -88.02 -0.79 -1.04 16 23 O -0.54 -2.23 18.04 5.33 0.10 -2.14 16 24 N -0.68 1.32 5.70 -15.79 -0.09 1.23 16 25 C 0.53 -1.05 8.00 -10.55 -0.08 -1.13 16 26 O -0.46 -0.39 17.48 5.60 0.10 -0.29 16 27 C -0.14 0.71 7.44 -25.92 -0.19 0.52 16 28 C -0.13 -0.22 9.55 -39.43 -0.38 -0.60 16 29 H 0.38 -0.49 8.70 45.56 0.40 -0.09 16 30 H 0.12 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 32 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 33 H 0.13 -0.24 4.87 -52.49 -0.26 -0.49 16 34 H 0.13 -0.26 8.06 -52.49 -0.42 -0.69 16 35 H 0.13 -0.02 6.30 -52.49 -0.33 -0.35 16 36 H 0.07 -0.01 7.62 -51.93 -0.40 -0.41 16 37 H 0.07 -0.01 7.62 -51.93 -0.40 -0.40 16 38 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 39 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 40 H 0.40 -2.37 8.70 -40.82 -0.36 -2.72 16 41 H 0.08 -0.32 8.14 -51.93 -0.42 -0.75 16 42 H 0.11 -0.50 8.10 -51.93 -0.42 -0.92 16 43 H 0.13 -0.83 8.05 -51.93 -0.42 -1.25 16 44 H 0.44 -2.31 8.96 -40.82 -0.37 -2.68 16 45 H 0.43 -1.32 8.96 -40.82 -0.37 -1.68 16 46 H 0.10 -0.59 8.03 -51.93 -0.42 -1.01 16 47 H 0.08 -0.34 8.14 -51.93 -0.42 -0.77 16 48 H 0.13 0.23 8.06 -52.49 -0.42 -0.19 16 LS Contribution 405.71 15.07 6.11 6.11 Total: 0.00 -12.04 405.71 -10.71 -22.75 By element: Atomic # 1 Polarization: -11.98 SS G_CDS: -6.28 Total: -18.26 kcal Atomic # 6 Polarization: -0.73 SS G_CDS: -4.37 Total: -5.10 kcal Atomic # 7 Polarization: 6.59 SS G_CDS: -0.74 Total: 5.85 kcal Atomic # 8 Polarization: -5.33 SS G_CDS: -0.37 Total: -5.70 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.06 Total: -5.65 kcal Total LS contribution 6.11 Total: 6.11 kcal Total: -12.04 -10.71 -22.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.008 kcal (2) G-P(sol) polarization free energy of solvation -12.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.707 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.749 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.757 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds