Wall clock time and date at job start Tue Mar 9 2021 13:38:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35993 * 116.99715 * 2 1 4 4 C 1.39160 * 120.06965 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07175 * 359.95626 * 4 3 2 6 6 C 1.42903 * 116.99587 * 180.02562 * 5 4 3 7 7 C 1.50701 * 109.46878 * 180.02562 * 6 5 4 8 8 O 1.21280 * 119.99781 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99795 * 179.97438 * 7 6 5 10 10 C 1.46497 * 119.99566 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85441 * 23.80863 * 10 9 7 12 12 C 1.53785 * 113.61126 * 155.00450 * 10 9 7 13 13 C 1.53779 * 87.08111 * 89.11843 * 12 10 9 14 14 H 1.09006 * 113.61169 * 270.88392 * 13 12 10 15 15 C 1.53003 * 113.61606 * 139.98419 * 13 12 10 16 16 N 1.47316 * 110.59598 * 294.17157 * 15 13 12 17 17 C 1.34525 * 106.61509 * 241.47637 * 16 15 13 18 18 O 1.21538 * 123.76848 * 179.97438 * 17 16 15 19 19 N 1.33799 * 112.45937 * 359.97438 * 17 16 15 20 20 C 1.34762 * 111.64156 * 0.02562 * 19 17 16 21 21 O 1.21236 * 127.15406 * 180.02562 * 20 19 17 22 22 C 1.53781 * 87.08464 * 25.43144 * 13 12 10 23 23 C 1.38563 * 119.85324 * 180.23907 * 4 3 2 24 24 C 1.38251 * 119.99789 * 359.48293 * 23 4 3 25 25 N 1.48000 * 119.92494 * 180.25415 * 24 23 4 26 26 O 1.21796 * 120.00413 * 0.26391 * 25 24 23 27 27 O 1.21802 * 120.00082 * 180.25891 * 25 24 23 28 28 C 1.38247 * 120.14512 * 0.51906 * 24 23 4 29 29 C 1.50699 * 119.92757 * 179.76007 * 28 24 23 30 30 O 1.42907 * 109.47034 * 74.97720 * 29 28 24 31 31 Si 1.86301 * 109.47495 * 194.97865 * 29 28 24 32 32 C 1.38240 * 120.14958 * 359.74175 * 28 24 23 33 33 H 1.09004 * 109.47097 * 299.99344 * 1 2 3 34 34 H 1.09000 * 109.47726 * 59.99385 * 1 2 3 35 35 H 1.08999 * 109.47233 * 179.97438 * 1 2 3 36 36 H 1.09002 * 109.47382 * 60.00075 * 6 5 4 37 37 H 1.09001 * 109.46938 * 300.00061 * 6 5 4 38 38 H 0.96995 * 120.00011 * 0.02562 * 9 7 6 39 39 H 1.09001 * 113.60931 * 203.66519 * 12 10 9 40 40 H 1.08994 * 113.61149 * 334.47869 * 12 10 9 41 41 H 1.09002 * 110.53117 * 57.16426 * 15 13 12 42 42 H 0.96992 * 126.69336 * 61.44451 * 16 15 13 43 43 H 0.97002 * 124.17587 * 179.97438 * 19 17 16 44 44 H 1.08992 * 113.61652 * 220.02349 * 22 13 12 45 45 H 1.09001 * 113.61195 * 89.11588 * 22 13 12 46 46 H 1.07998 * 120.00324 * 179.72425 * 23 4 3 47 47 H 1.08999 * 109.47191 * 314.98171 * 29 28 24 48 48 H 0.96698 * 113.99810 * 179.97438 * 30 29 28 49 49 H 1.48508 * 109.99760 * 300.00237 * 31 29 28 50 50 H 1.48501 * 110.00029 * 61.31739 * 31 29 28 51 51 H 1.08000 * 120.00666 * 179.97438 * 32 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0002 6 6 5.6003 0.3007 -0.0002 7 6 6.2518 -1.0582 -0.0004 8 8 5.5669 -2.0591 -0.0010 9 7 7.5957 -1.1611 -0.0010 10 6 8.2290 -2.4821 -0.0017 11 1 7.5832 -3.2610 -0.4072 12 6 9.6467 -2.4852 -0.5977 13 6 10.1585 -2.1818 0.8203 14 1 10.2148 -1.1168 1.0457 15 6 11.4392 -2.9359 1.1841 16 7 11.1860 -4.3857 1.2497 17 6 11.4535 -4.7661 2.5120 18 8 11.3462 -5.9094 2.9101 19 7 11.8508 -3.7452 3.2803 20 6 11.8821 -2.5875 2.5912 21 8 12.1992 -1.4947 3.0096 22 6 8.8780 -2.8550 1.3417 23 6 4.0603 2.5233 0.0045 24 6 3.3028 3.6799 -0.0008 25 7 3.9714 5.0003 -0.0011 26 8 5.1875 5.0672 -0.0016 27 8 3.3055 6.0201 -0.0010 28 6 1.9224 3.6057 -0.0003 29 6 1.1016 4.8696 -0.0006 30 8 1.1345 5.4587 -1.3022 31 14 -0.6595 4.4665 0.4542 32 6 1.2932 2.3748 0.0002 33 1 -0.3633 0.5138 0.8901 34 1 -0.3634 0.5139 -0.8899 35 1 -0.3633 -1.0276 -0.0005 36 1 5.9065 0.8508 0.8896 37 1 5.9065 0.8502 -0.8904 38 1 8.1434 -0.3606 -0.0009 39 1 9.9592 -3.4586 -0.9758 40 1 9.8230 -1.6784 -1.3090 41 1 12.2300 -2.7144 0.4674 42 1 10.8847 -4.9548 0.5244 43 1 12.0864 -3.8281 4.2176 44 1 8.4342 -2.3457 2.1971 45 1 8.9804 -3.9294 1.4939 46 1 5.1385 2.5840 0.0086 47 1 1.5131 5.5703 0.7258 48 1 0.6257 6.2776 -1.3762 49 1 -1.2322 3.5119 -0.5287 50 1 -0.7108 3.8825 1.8186 51 1 0.2146 2.3196 0.0010 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17522896_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:18 Heat of formation + Delta-G solvation = -106.447660 kcal Electronic energy + Delta-G solvation = -42968.670671 eV Core-core repulsion = 37035.049257 eV Total energy + Delta-G solvation = -5933.621414 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.150 amu Computer time = 1.75 seconds Orbital eigenvalues (eV) -43.56369 -43.46410 -42.23486 -41.35807 -40.19339 -39.74945 -39.36206 -39.02032 -37.80043 -37.20332 -37.12594 -35.16559 -33.98759 -32.86798 -32.66609 -30.34990 -29.34159 -28.89097 -27.97742 -26.81429 -25.92906 -25.11422 -24.09465 -23.76296 -23.19584 -22.55742 -22.11408 -20.84833 -20.42487 -19.92898 -19.59670 -19.28211 -18.89825 -18.78876 -18.27945 -18.13271 -18.09142 -17.83377 -17.81893 -17.62132 -17.10106 -17.00522 -16.89610 -16.61454 -16.57191 -16.03727 -15.80404 -15.63202 -15.52223 -15.42527 -15.34617 -15.02882 -14.80483 -14.60978 -14.32205 -14.15330 -13.97548 -13.60865 -13.51352 -13.25332 -13.02389 -12.72398 -12.69411 -12.56873 -12.49999 -12.45033 -12.40447 -12.35104 -12.21921 -11.92786 -11.85017 -11.53061 -11.48420 -11.22373 -11.15811 -10.64044 -10.49418 -10.24754 -10.24343 -9.62537 -5.01632 -1.40659 -0.58103 0.10433 0.22508 0.51143 1.13790 1.14313 1.31348 1.40623 1.56327 1.69668 1.76335 1.79594 1.91593 2.14031 2.24553 2.81002 2.88221 3.02699 3.18542 3.31964 3.35199 3.42244 3.43470 3.59260 3.71899 3.72355 3.76245 3.79328 3.91167 3.91790 3.98387 4.06116 4.09810 4.15819 4.20201 4.21774 4.38450 4.49301 4.56545 4.59491 4.61196 4.71529 4.78611 4.89610 4.97737 5.00864 5.09140 5.22524 5.40151 5.49791 5.76045 5.86188 5.88171 6.33041 6.35064 6.49630 6.83520 7.02513 7.07162 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.304 6.304 3 C 0.162 3.838 4 C 0.104 3.896 5 O -0.290 6.290 6 C 0.024 3.976 7 C 0.519 3.481 8 O -0.566 6.566 9 N -0.691 5.691 10 C 0.114 3.886 11 H 0.087 0.913 12 C -0.114 4.114 13 C -0.105 4.105 14 H 0.127 0.873 15 C 0.111 3.889 16 N -0.701 5.701 17 C 0.703 3.297 18 O -0.588 6.588 19 N -0.679 5.679 20 C 0.530 3.470 21 O -0.496 6.496 22 C -0.155 4.155 23 C -0.106 4.106 24 C -0.043 4.043 25 N 0.037 4.963 26 O -0.190 6.190 27 O -0.141 6.141 28 C -0.005 4.005 29 C -0.100 4.100 30 O -0.553 6.553 31 Si 0.777 3.223 32 C -0.187 4.187 33 H 0.072 0.928 34 H 0.073 0.927 35 H 0.131 0.869 36 H 0.129 0.871 37 H 0.132 0.868 38 H 0.423 0.577 39 H 0.116 0.884 40 H 0.105 0.895 41 H 0.170 0.830 42 H 0.452 0.548 43 H 0.436 0.564 44 H 0.059 0.941 45 H 0.093 0.907 46 H 0.192 0.808 47 H 0.101 0.899 48 H 0.408 0.592 49 H -0.268 1.268 50 H -0.278 1.278 51 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.719 3.575 -3.700 5.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.216 6.216 3 C 0.114 3.886 4 C 0.057 3.943 5 O -0.203 6.203 6 C -0.054 4.054 7 C 0.305 3.695 8 O -0.443 6.443 9 N -0.345 5.345 10 C 0.009 3.991 11 H 0.105 0.895 12 C -0.152 4.152 13 C -0.124 4.124 14 H 0.145 0.855 15 C 0.003 3.997 16 N -0.367 5.367 17 C 0.403 3.597 18 O -0.465 6.465 19 N -0.349 5.349 20 C 0.317 3.683 21 O -0.367 6.367 22 C -0.194 4.194 23 C -0.126 4.126 24 C -0.127 4.127 25 N 0.552 4.448 26 O -0.398 6.398 27 O -0.361 6.361 28 C -0.006 4.006 29 C -0.208 4.208 30 O -0.363 6.363 31 Si 0.679 3.321 32 C -0.206 4.206 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.149 0.851 36 H 0.147 0.853 37 H 0.150 0.850 38 H 0.261 0.739 39 H 0.135 0.865 40 H 0.123 0.877 41 H 0.187 0.813 42 H 0.300 0.700 43 H 0.279 0.721 44 H 0.078 0.922 45 H 0.111 0.889 46 H 0.209 0.791 47 H 0.119 0.881 48 H 0.260 0.740 49 H -0.195 1.195 50 H -0.204 1.204 51 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges -2.532 0.692 -3.270 4.193 hybrid contribution 0.918 0.327 0.574 1.131 sum -1.614 1.020 -2.695 3.303 Atomic orbital electron populations 1.23669 0.75318 1.07113 1.02852 1.86311 1.24194 1.24607 1.86505 1.18670 0.89635 0.85972 0.94320 1.17863 0.88307 0.85497 1.02669 1.86301 1.18769 1.26555 1.88673 1.22984 0.78499 0.96372 1.07534 1.20267 0.83206 0.90239 0.75783 1.90793 1.63985 1.39796 1.49747 1.45329 1.04880 1.09954 1.74363 1.21841 0.94952 0.85016 0.97319 0.89501 1.23339 0.91105 1.05586 0.95157 1.22961 0.90052 1.01011 0.98392 0.85462 1.22146 1.01432 0.80972 0.95159 1.45499 1.70889 1.09703 1.10606 1.15967 0.77482 0.83587 0.82696 1.91077 1.59280 1.19491 1.76654 1.44378 1.63917 1.10112 1.16455 1.21192 0.74824 0.83014 0.89270 1.90875 1.45884 1.23824 1.76101 1.23572 0.96130 1.02007 0.97720 1.20977 1.03263 0.87894 1.00439 1.20536 0.92360 0.82800 1.16989 1.43442 1.00866 1.02980 0.97474 1.94520 0.96121 1.93933 1.55211 1.94481 1.64629 1.24825 1.52173 1.19317 0.90924 0.96129 0.94271 1.25219 1.10991 0.93397 0.91207 1.86384 1.77521 1.45418 1.27004 0.93532 0.75785 0.85912 0.76901 1.21046 1.01305 0.89555 1.08713 0.90944 0.90890 0.85091 0.85296 0.85028 0.73887 0.86549 0.87664 0.81317 0.70048 0.72139 0.92213 0.88851 0.79103 0.88142 0.73960 1.19460 1.20391 0.81444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.30 -1.55 10.28 -79.60 -0.82 -2.37 16 3 C 0.16 0.73 6.70 22.57 0.15 0.88 16 4 C 0.10 0.37 6.70 22.57 0.15 0.52 16 5 O -0.29 -1.41 9.45 -67.08 -0.63 -2.04 16 6 C 0.02 -0.10 5.22 71.24 0.37 0.27 16 7 C 0.52 0.19 7.91 87.66 0.69 0.88 16 8 O -0.57 -6.86 16.10 16.01 0.26 -6.60 16 9 N -0.69 5.31 5.26 -440.02 -2.32 3.00 16 10 C 0.11 -0.81 4.32 45.52 0.20 -0.61 16 11 H 0.09 -0.13 7.46 -2.39 -0.02 -0.15 16 12 C -0.11 1.67 7.32 31.12 0.23 1.90 16 13 C -0.10 1.31 3.52 -10.27 -0.04 1.27 16 14 H 0.13 -1.73 8.14 -2.38 -0.02 -1.75 16 15 C 0.11 -1.26 3.70 44.37 0.16 -1.09 16 16 N -0.70 6.20 4.45 -459.60 -2.05 4.16 16 17 C 0.70 -0.20 8.92 179.44 1.60 1.40 16 18 O -0.59 -5.67 18.04 -3.83 -0.07 -5.74 16 19 N -0.68 1.95 5.70 -441.13 -2.52 -0.57 16 20 C 0.53 -2.00 8.14 87.94 0.72 -1.28 16 21 O -0.50 -1.47 18.02 -2.89 -0.05 -1.53 16 22 C -0.16 1.04 7.26 31.12 0.23 1.27 16 23 C -0.11 -0.13 8.54 22.35 0.19 0.06 16 24 C -0.04 -0.22 6.85 36.38 0.25 0.02 16 25 N 0.04 0.31 4.45 -46.46 -0.21 0.11 16 26 O -0.19 -1.79 18.44 18.89 0.35 -1.44 16 27 O -0.14 -1.28 14.62 25.10 0.37 -0.92 16 28 C 0.00 -0.02 5.29 -19.86 -0.11 -0.12 16 29 C -0.10 0.03 1.73 71.24 0.12 0.15 16 30 O -0.55 -0.12 11.77 -129.63 -1.53 -1.65 16 31 Si 0.78 -4.10 30.19 68.60 2.07 -2.03 16 32 C -0.19 -0.45 7.65 22.35 0.17 -0.28 16 33 H 0.07 -0.40 7.66 -2.38 -0.02 -0.42 16 34 H 0.07 -0.37 7.66 -2.39 -0.02 -0.39 16 35 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 36 H 0.13 -1.34 7.65 -2.39 -0.02 -1.36 16 37 H 0.13 -1.42 7.67 -2.39 -0.02 -1.44 16 38 H 0.42 -6.32 8.70 -92.71 -0.81 -7.13 16 39 H 0.12 -2.00 7.69 -2.39 -0.02 -2.01 16 40 H 0.10 -1.81 8.14 -2.39 -0.02 -1.83 16 41 H 0.17 -2.86 8.14 -2.39 -0.02 -2.88 16 42 H 0.45 -5.67 8.65 -92.71 -0.80 -6.48 16 43 H 0.44 -1.82 8.96 -92.71 -0.83 -2.65 16 44 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 45 H 0.09 -0.48 6.71 -2.39 -0.02 -0.50 16 46 H 0.19 -0.94 5.85 -2.91 -0.02 -0.95 16 47 H 0.10 -0.06 6.07 -2.39 -0.01 -0.08 16 48 H 0.41 -4.00 8.74 -74.06 -0.65 -4.65 16 49 H -0.27 0.52 6.75 99.48 0.67 1.19 16 50 H -0.28 0.20 7.11 99.48 0.71 0.91 16 51 H 0.17 -0.15 3.13 -2.91 -0.01 -0.16 16 Total: 0.00 -42.12 433.57 -2.91 -45.03 By element: Atomic # 1 Polarization: -31.79 SS G_CDS: -1.97 Total: -33.76 kcal Atomic # 6 Polarization: 0.14 SS G_CDS: 6.20 Total: 6.34 kcal Atomic # 7 Polarization: 13.78 SS G_CDS: -7.09 Total: 6.69 kcal Atomic # 8 Polarization: -20.15 SS G_CDS: -2.13 Total: -22.27 kcal Atomic # 14 Polarization: -4.10 SS G_CDS: 2.07 Total: -2.03 kcal Total: -42.12 -2.91 -45.03 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.413 kcal (2) G-P(sol) polarization free energy of solvation -42.125 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.909 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.034 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.75 seconds