Wall clock time and date at job start Tue Mar 9 2021 13:38:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35986 * 116.99654 * 2 1 4 4 C 1.38681 * 119.99716 * 180.02562 * 3 2 1 5 5 C 1.38152 * 119.99759 * 179.74994 * 4 3 2 6 6 C 1.50700 * 120.00101 * 180.25364 * 5 4 3 7 7 O 1.42897 * 109.47519 * 105.25312 * 6 5 4 8 8 Si 1.86306 * 109.46861 * 345.25571 * 6 5 4 9 9 C 1.38675 * 119.99960 * 0.50615 * 5 4 3 10 10 O 1.35985 * 120.00042 * 179.74529 * 9 5 4 11 11 C 1.42898 * 117.00012 * 179.73041 * 10 9 5 12 12 C 1.50699 * 109.46856 * 180.02562 * 11 10 9 13 13 O 1.21281 * 120.00331 * 359.97438 * 12 11 10 14 14 N 1.34784 * 120.00130 * 180.02562 * 12 11 10 15 15 C 1.46491 * 120.00400 * 179.97438 * 14 12 11 16 16 H 1.09005 * 112.84826 * 23.80082 * 15 14 12 17 17 C 1.53780 * 113.61599 * 154.99553 * 15 14 12 18 18 C 1.53783 * 87.08081 * 89.11519 * 17 15 14 19 19 H 1.08997 * 113.61464 * 270.79927 * 18 17 15 20 20 C 1.53002 * 113.61399 * 139.97814 * 18 17 15 21 21 N 1.47317 * 110.59880 * 63.53283 * 20 18 17 22 22 C 1.34867 * 106.43685 * 118.72658 * 21 20 18 23 23 O 1.21541 * 123.72809 * 179.97438 * 22 21 20 24 24 N 1.33792 * 112.50101 * 359.86480 * 22 21 20 25 25 C 1.34762 * 111.64692 * 0.08951 * 24 22 21 26 26 O 1.21234 * 127.15867 * 180.02562 * 25 24 22 27 27 C 1.53775 * 113.61469 * 252.49432 * 15 14 12 28 28 C 1.38716 * 120.00189 * 359.47187 * 9 5 4 29 29 C 1.38115 * 119.99576 * 0.27502 * 28 9 5 30 30 H 1.08998 * 109.46846 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47198 * 299.99388 * 1 2 3 32 32 H 1.08997 * 109.47288 * 59.99577 * 1 2 3 33 33 H 1.08001 * 120.00227 * 359.97438 * 4 3 2 34 34 H 1.09002 * 109.47124 * 225.25811 * 6 5 4 35 35 H 0.96698 * 114.00548 * 180.02562 * 7 6 5 36 36 H 1.48493 * 110.00108 * 60.00128 * 8 6 5 37 37 H 1.48504 * 109.99626 * 181.32182 * 8 6 5 38 38 H 1.08992 * 109.47421 * 59.99650 * 11 10 9 39 39 H 1.08997 * 109.47111 * 299.99454 * 11 10 9 40 40 H 0.96998 * 119.99281 * 359.97438 * 14 12 11 41 41 H 1.09004 * 113.61403 * 334.56645 * 17 15 14 42 42 H 1.09002 * 113.69423 * 203.67563 * 17 15 14 43 43 H 1.09002 * 110.53624 * 300.70346 * 20 18 17 44 44 H 0.96995 * 126.68986 * 298.65154 * 21 20 18 45 45 H 0.96999 * 124.17609 * 180.02562 * 24 22 21 46 46 H 1.09004 * 113.61844 * 156.33303 * 27 15 14 47 47 H 1.08996 * 113.61613 * 25.43314 * 27 15 14 48 48 H 1.08001 * 120.00447 * 180.29312 * 28 9 5 49 49 H 1.07998 * 119.99263 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0583 2.5152 -0.0058 6 6 5.5632 2.5942 -0.0121 7 8 6.0151 2.9703 -1.3146 8 14 6.2742 0.9313 0.4356 9 6 3.3030 3.6782 0.0001 10 8 3.9203 4.8899 0.0002 11 6 3.0804 6.0459 0.0005 12 6 3.9346 7.2874 -0.0001 13 8 5.1436 7.1917 -0.0002 14 7 3.3549 8.5043 0.0006 15 6 4.1852 9.7112 0.0006 16 1 5.1822 9.5391 -0.4053 17 6 3.4821 10.9427 -0.5942 18 6 2.9644 11.2344 0.8241 19 1 2.0121 10.7540 1.0487 20 6 2.9810 12.7201 1.1891 21 7 2.0698 13.4789 0.3150 22 6 1.1384 14.0290 1.1204 23 8 0.2266 14.7259 0.7200 24 7 1.3284 13.7205 2.4083 25 6 2.4102 12.9348 2.5769 26 8 2.8376 12.4914 3.6211 27 6 4.1858 10.4585 1.3446 28 6 1.9178 3.6057 0.0002 29 6 1.2908 2.3750 0.0002 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 4.0195 0.3785 -0.0005 34 1 5.8912 3.3372 0.7149 35 1 6.9764 3.0404 -1.3924 36 1 5.8345 -0.0905 -0.5480 37 1 7.7572 1.0041 0.4640 38 1 2.4512 6.0377 0.8904 39 1 2.4511 6.0380 -0.8894 40 1 2.3880 8.5808 0.0011 41 1 2.6934 10.6945 -1.3045 42 1 4.1695 11.6994 -0.9724 43 1 3.9938 13.1182 1.1252 44 1 2.1300 13.5656 -0.6492 45 1 0.7585 14.0256 3.1315 46 1 5.0667 11.0821 1.4971 47 1 3.9653 9.8195 2.1996 48 1 1.3295 4.5114 0.0000 49 1 0.2123 2.3185 0.0006 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:41 Heat of formation + Delta-G solvation = -109.679944 kcal Electronic energy + Delta-G solvation = -35861.147251 eV Core-core repulsion = 30758.402111 eV Total energy + Delta-G solvation = -5102.745140 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.155 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.56030 -41.79386 -41.29010 -40.18459 -39.72843 -39.26307 -38.00494 -37.22434 -36.93441 -35.19866 -34.18875 -32.88247 -31.13593 -30.07184 -29.03302 -28.03067 -27.06167 -26.51542 -25.33959 -23.91166 -23.66818 -22.72501 -22.30267 -21.95730 -20.74364 -19.51337 -19.39555 -18.66874 -18.48950 -18.38462 -18.07301 -17.88608 -17.51249 -17.44183 -17.24483 -16.96367 -16.66013 -16.57459 -16.13443 -16.02852 -15.82821 -15.53746 -15.44431 -15.35280 -15.20394 -15.12594 -14.59339 -14.32525 -14.11205 -13.89335 -13.74887 -13.69464 -13.58571 -13.46429 -13.13859 -12.89378 -12.63077 -12.54994 -12.37923 -11.96348 -11.78007 -11.77215 -11.62889 -11.52665 -11.44969 -11.29402 -10.96605 -10.69067 -10.30097 -10.28836 -10.06350 -8.74675 -4.87013 0.10612 0.41435 0.42948 1.22769 1.36475 1.37438 1.40404 1.68318 1.85136 1.92129 2.02894 2.27971 2.50670 2.58388 2.63859 3.04293 3.27281 3.30854 3.36805 3.47082 3.49312 3.65470 3.67986 3.73449 3.82974 3.87737 3.97322 4.04626 4.12765 4.13752 4.19902 4.22040 4.34440 4.38550 4.38641 4.47484 4.53507 4.56308 4.60008 4.69513 4.77663 4.80910 4.87106 5.07118 5.16654 5.24223 5.29762 5.46847 5.56006 5.72935 6.11010 6.20421 6.26425 6.43872 6.62492 6.97351 7.00543 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.315 6.315 3 C 0.100 3.900 4 C -0.110 4.110 5 C -0.059 4.059 6 C -0.065 4.065 7 O -0.529 6.529 8 Si 0.683 3.317 9 C 0.116 3.884 10 O -0.278 6.278 11 C 0.039 3.961 12 C 0.521 3.479 13 O -0.505 6.505 14 N -0.713 5.713 15 C 0.124 3.876 16 H 0.112 0.888 17 C -0.136 4.136 18 C -0.115 4.115 19 H 0.101 0.899 20 C 0.101 3.899 21 N -0.721 5.721 22 C 0.703 3.297 23 O -0.539 6.539 24 N -0.681 5.681 25 C 0.527 3.473 26 O -0.458 6.458 27 C -0.138 4.138 28 C -0.170 4.170 29 C -0.161 4.161 30 H 0.102 0.898 31 H 0.056 0.944 32 H 0.055 0.945 33 H 0.144 0.856 34 H 0.081 0.919 35 H 0.379 0.621 36 H -0.253 1.253 37 H -0.260 1.260 38 H 0.094 0.906 39 H 0.093 0.907 40 H 0.402 0.598 41 H 0.082 0.918 42 H 0.104 0.896 43 H 0.132 0.868 44 H 0.443 0.557 45 H 0.435 0.565 46 H 0.101 0.899 47 H 0.082 0.918 48 H 0.133 0.867 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.222 0.283 0.514 3.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.055 3.945 4 C -0.128 4.128 5 C -0.060 4.060 6 C -0.175 4.175 7 O -0.336 6.336 8 Si 0.585 3.415 9 C 0.071 3.929 10 O -0.191 6.191 11 C -0.040 4.040 12 C 0.305 3.695 13 O -0.378 6.378 14 N -0.367 5.367 15 C 0.018 3.982 16 H 0.130 0.870 17 C -0.174 4.174 18 C -0.134 4.134 19 H 0.119 0.881 20 C -0.008 4.008 21 N -0.387 5.387 22 C 0.402 3.598 23 O -0.412 6.412 24 N -0.352 5.352 25 C 0.312 3.688 26 O -0.326 6.326 27 C -0.177 4.177 28 C -0.189 4.189 29 C -0.180 4.180 30 H 0.120 0.880 31 H 0.075 0.925 32 H 0.073 0.927 33 H 0.162 0.838 34 H 0.099 0.901 35 H 0.227 0.773 36 H -0.178 1.178 37 H -0.185 1.185 38 H 0.112 0.888 39 H 0.111 0.889 40 H 0.237 0.763 41 H 0.101 0.899 42 H 0.122 0.878 43 H 0.150 0.850 44 H 0.287 0.713 45 H 0.277 0.723 46 H 0.120 0.880 47 H 0.101 0.899 48 H 0.151 0.849 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -2.354 -0.525 0.456 2.454 hybrid contribution -0.785 1.246 -0.833 1.692 sum -3.138 0.722 -0.377 3.242 Atomic orbital electron populations 1.23090 0.78115 1.04318 1.01329 1.86108 1.21499 1.26264 1.89013 1.18731 0.91808 0.84533 0.99445 1.20181 0.91954 0.97213 1.03450 1.18294 0.93797 0.89859 1.04053 1.24602 0.93709 1.10722 0.88426 1.86588 1.27045 1.90662 1.29325 0.95116 0.80186 0.76398 0.89843 1.18597 0.90521 0.84765 0.99034 1.86214 1.33242 1.10782 1.88844 1.22426 0.93196 0.84437 1.03908 1.20035 0.88867 0.84054 0.76513 1.90791 1.14130 1.86396 1.46493 1.45469 1.10128 1.04635 1.76480 1.21795 0.96267 0.83224 0.96886 0.87020 1.23368 1.00948 0.97660 0.95452 1.22878 1.00738 0.91445 0.98368 0.88076 1.22181 0.96863 0.94400 0.87316 1.45600 1.29337 1.53580 1.10149 1.15961 0.82593 0.80152 0.81078 1.91102 1.33007 1.40381 1.76718 1.44362 1.30532 1.49757 1.10558 1.20791 0.79947 0.76948 0.91119 1.90891 1.62263 1.48278 1.31147 1.23466 0.97382 0.98585 0.98250 1.21017 0.92825 0.98673 1.06408 1.21077 1.00284 0.91506 1.05147 0.87961 0.92505 0.92651 0.83846 0.90147 0.77325 1.17831 1.18461 0.88843 0.88920 0.76331 0.89901 0.87753 0.85031 0.71257 0.72286 0.88013 0.89915 0.84905 0.84734 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.32 -0.57 10.50 -19.70 -0.21 -0.78 16 3 C 0.10 0.20 6.69 -39.24 -0.26 -0.06 16 4 C -0.11 -0.27 8.59 -39.45 -0.34 -0.61 16 5 C -0.06 -0.18 5.31 -104.49 -0.55 -0.73 16 6 C -0.06 -0.15 2.36 36.01 0.09 -0.07 16 7 O -0.53 -1.96 12.86 -35.23 -0.45 -2.42 16 8 Si 0.68 0.46 30.19 -169.99 -5.13 -4.67 16 9 C 0.12 0.28 6.66 -39.24 -0.26 0.02 16 10 O -0.28 -0.81 9.00 -39.60 -0.36 -1.17 16 11 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 12 C 0.52 0.17 7.91 -10.98 -0.09 0.08 16 13 O -0.51 -2.64 16.10 -14.35 -0.23 -2.87 16 14 N -0.71 2.36 5.26 -53.02 -0.28 2.08 16 15 C 0.12 -0.43 4.32 -67.13 -0.29 -0.72 16 16 H 0.11 -0.16 7.46 -51.93 -0.39 -0.55 16 17 C -0.14 0.82 7.26 -25.92 -0.19 0.64 16 18 C -0.11 0.60 3.27 -89.81 -0.29 0.31 16 19 H 0.10 -0.53 8.14 -51.93 -0.42 -0.95 16 20 C 0.10 -0.47 3.40 -68.20 -0.23 -0.70 16 21 N -0.72 2.95 6.14 -59.09 -0.36 2.59 16 22 C 0.70 -0.40 9.00 -87.71 -0.79 -1.19 16 23 O -0.54 -2.07 18.04 5.33 0.10 -1.97 16 24 N -0.68 1.32 5.70 -15.71 -0.09 1.23 16 25 C 0.53 -0.91 8.14 -10.56 -0.09 -1.00 16 26 O -0.46 -0.69 18.02 5.60 0.10 -0.59 16 27 C -0.14 0.52 7.44 -25.92 -0.19 0.33 16 28 C -0.17 -0.03 9.03 -39.45 -0.36 -0.38 16 29 C -0.16 -0.05 9.03 -39.45 -0.36 -0.40 16 30 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 32 H 0.05 -0.15 7.66 -51.93 -0.40 -0.55 16 33 H 0.14 0.25 4.89 -52.49 -0.26 -0.01 16 34 H 0.08 0.16 7.82 -51.93 -0.41 -0.25 16 35 H 0.38 -0.05 8.74 45.56 0.40 0.35 16 36 H -0.25 -0.83 6.75 56.52 0.38 -0.45 16 37 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 38 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 39 H 0.09 -0.33 7.66 -51.93 -0.40 -0.72 16 40 H 0.40 -2.49 8.70 -40.82 -0.36 -2.85 16 41 H 0.08 -0.53 8.14 -51.93 -0.42 -0.95 16 42 H 0.10 -0.74 8.10 -51.93 -0.42 -1.16 16 43 H 0.13 -0.82 8.01 -51.93 -0.42 -1.24 16 44 H 0.44 -2.56 8.96 -40.82 -0.37 -2.93 16 45 H 0.43 -1.32 8.96 -40.82 -0.37 -1.68 16 46 H 0.10 -0.44 8.00 -51.93 -0.42 -0.86 16 47 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 48 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16 49 H 0.13 -0.29 6.29 -52.49 -0.33 -0.62 16 LS Contribution 414.58 15.07 6.25 6.25 Total: 0.00 -14.95 414.58 -9.84 -24.79 By element: Atomic # 1 Polarization: -12.91 SS G_CDS: -6.15 Total: -19.06 kcal Atomic # 6 Polarization: -0.38 SS G_CDS: -3.02 Total: -3.41 kcal Atomic # 7 Polarization: 6.63 SS G_CDS: -0.73 Total: 5.90 kcal Atomic # 8 Polarization: -8.75 SS G_CDS: -1.05 Total: -9.80 kcal Atomic # 14 Polarization: 0.46 SS G_CDS: -5.13 Total: -4.67 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -14.95 -9.84 -24.79 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -84.894 kcal (2) G-P(sol) polarization free energy of solvation -14.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.841 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.786 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.680 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds