Wall clock time and date at job start Tue Mar 9 2021 13:38:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35986 * 116.99654 * 2 1 4 4 C 1.38681 * 119.99716 * 180.02562 * 3 2 1 5 5 C 1.38152 * 119.99759 * 179.74994 * 4 3 2 6 6 C 1.50700 * 120.00101 * 180.25364 * 5 4 3 7 7 O 1.42897 * 109.47519 * 105.25312 * 6 5 4 8 8 Si 1.86306 * 109.46861 * 345.25571 * 6 5 4 9 9 C 1.38675 * 119.99960 * 0.50615 * 5 4 3 10 10 O 1.35985 * 120.00042 * 179.74529 * 9 5 4 11 11 C 1.42898 * 117.00012 * 179.73041 * 10 9 5 12 12 C 1.50699 * 109.46856 * 180.02562 * 11 10 9 13 13 O 1.21281 * 120.00331 * 359.97438 * 12 11 10 14 14 N 1.34784 * 120.00130 * 180.02562 * 12 11 10 15 15 C 1.46491 * 120.00400 * 179.97438 * 14 12 11 16 16 H 1.09005 * 112.84826 * 23.80082 * 15 14 12 17 17 C 1.53780 * 113.61599 * 154.99553 * 15 14 12 18 18 C 1.53783 * 87.08081 * 89.11519 * 17 15 14 19 19 H 1.08997 * 113.61464 * 270.79927 * 18 17 15 20 20 C 1.53002 * 113.61399 * 139.97814 * 18 17 15 21 21 N 1.47317 * 110.59880 * 63.53283 * 20 18 17 22 22 C 1.34867 * 106.43685 * 118.72658 * 21 20 18 23 23 O 1.21541 * 123.72809 * 179.97438 * 22 21 20 24 24 N 1.33792 * 112.50101 * 359.86480 * 22 21 20 25 25 C 1.34762 * 111.64692 * 0.08951 * 24 22 21 26 26 O 1.21234 * 127.15867 * 180.02562 * 25 24 22 27 27 C 1.53775 * 113.61469 * 252.49432 * 15 14 12 28 28 C 1.38716 * 120.00189 * 359.47187 * 9 5 4 29 29 C 1.38115 * 119.99576 * 0.27502 * 28 9 5 30 30 H 1.08998 * 109.46846 * 179.97438 * 1 2 3 31 31 H 1.08995 * 109.47198 * 299.99388 * 1 2 3 32 32 H 1.08997 * 109.47288 * 59.99577 * 1 2 3 33 33 H 1.08001 * 120.00227 * 359.97438 * 4 3 2 34 34 H 1.09002 * 109.47124 * 225.25811 * 6 5 4 35 35 H 0.96698 * 114.00548 * 180.02562 * 7 6 5 36 36 H 1.48493 * 110.00108 * 60.00128 * 8 6 5 37 37 H 1.48504 * 109.99626 * 181.32182 * 8 6 5 38 38 H 1.08992 * 109.47421 * 59.99650 * 11 10 9 39 39 H 1.08997 * 109.47111 * 299.99454 * 11 10 9 40 40 H 0.96998 * 119.99281 * 359.97438 * 14 12 11 41 41 H 1.09004 * 113.61403 * 334.56645 * 17 15 14 42 42 H 1.09002 * 113.69423 * 203.67563 * 17 15 14 43 43 H 1.09002 * 110.53624 * 300.70346 * 20 18 17 44 44 H 0.96995 * 126.68986 * 298.65154 * 21 20 18 45 45 H 0.96999 * 124.17609 * 180.02562 * 24 22 21 46 46 H 1.09004 * 113.61844 * 156.33303 * 27 15 14 47 47 H 1.08996 * 113.61613 * 25.43314 * 27 15 14 48 48 H 1.08001 * 120.00447 * 180.29312 * 28 9 5 49 49 H 1.07998 * 119.99263 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 -0.0005 5 6 4.0583 2.5152 -0.0058 6 6 5.5632 2.5942 -0.0121 7 8 6.0151 2.9703 -1.3146 8 14 6.2742 0.9313 0.4356 9 6 3.3030 3.6782 0.0001 10 8 3.9203 4.8899 0.0002 11 6 3.0804 6.0459 0.0005 12 6 3.9346 7.2874 -0.0001 13 8 5.1436 7.1917 -0.0002 14 7 3.3549 8.5043 0.0006 15 6 4.1852 9.7112 0.0006 16 1 5.1822 9.5391 -0.4053 17 6 3.4821 10.9427 -0.5942 18 6 2.9644 11.2344 0.8241 19 1 2.0121 10.7540 1.0487 20 6 2.9810 12.7201 1.1891 21 7 2.0698 13.4789 0.3150 22 6 1.1384 14.0290 1.1204 23 8 0.2266 14.7259 0.7200 24 7 1.3284 13.7205 2.4083 25 6 2.4102 12.9348 2.5769 26 8 2.8376 12.4914 3.6211 27 6 4.1858 10.4585 1.3446 28 6 1.9178 3.6057 0.0002 29 6 1.2908 2.3750 0.0002 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3633 0.5137 0.8900 32 1 -0.3634 0.5139 -0.8899 33 1 4.0195 0.3785 -0.0005 34 1 5.8912 3.3372 0.7149 35 1 6.9764 3.0404 -1.3924 36 1 5.8345 -0.0905 -0.5480 37 1 7.7572 1.0041 0.4640 38 1 2.4512 6.0377 0.8904 39 1 2.4511 6.0380 -0.8894 40 1 2.3880 8.5808 0.0011 41 1 2.6934 10.6945 -1.3045 42 1 4.1695 11.6994 -0.9724 43 1 3.9938 13.1182 1.1252 44 1 2.1300 13.5656 -0.6492 45 1 0.7585 14.0256 3.1315 46 1 5.0667 11.0821 1.4971 47 1 3.9653 9.8195 2.1996 48 1 1.3295 4.5114 0.0000 49 1 0.2123 2.3185 0.0006 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17522896_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:39 Heat of formation + Delta-G solvation = -120.806771 kcal Electronic energy + Delta-G solvation = -35861.629747 eV Core-core repulsion = 30758.402111 eV Total energy + Delta-G solvation = -5103.227636 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.155 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -43.42218 -41.79000 -41.19028 -40.12859 -39.72519 -39.21257 -38.13431 -37.22724 -37.02382 -35.07740 -34.05575 -32.93242 -31.09993 -29.94121 -28.87672 -27.93453 -26.70294 -26.59847 -25.15616 -23.83699 -23.60090 -22.52859 -22.32302 -21.88786 -20.49172 -19.42052 -19.38191 -18.66602 -18.58539 -18.43794 -17.92660 -17.78432 -17.47069 -17.37181 -17.07376 -16.83936 -16.60603 -16.45700 -16.09458 -15.98733 -15.72510 -15.54242 -15.45179 -15.34765 -15.22990 -15.07726 -14.63948 -14.09988 -14.08704 -13.82774 -13.73501 -13.56164 -13.42848 -13.32242 -13.18000 -12.61818 -12.56014 -12.48378 -12.31849 -11.91488 -11.81841 -11.70749 -11.51726 -11.46043 -11.41350 -11.16322 -10.99973 -10.48021 -10.45839 -10.14292 -10.11710 -8.79360 -4.96975 0.05837 0.36688 0.52060 1.25629 1.39709 1.44662 1.49186 1.55917 1.88185 1.92743 2.15261 2.33012 2.53653 2.61197 2.85449 3.36902 3.42256 3.52428 3.62200 3.62662 3.70861 3.76559 3.81216 3.98186 4.01170 4.08104 4.10602 4.17430 4.25203 4.29458 4.36016 4.39105 4.43751 4.45311 4.67168 4.70850 4.78412 4.80320 4.86187 4.95462 5.00383 5.02900 5.07406 5.12932 5.14269 5.21705 5.43802 5.55080 5.80788 5.87244 6.18287 6.37077 6.41199 6.47954 6.57301 7.10355 7.13132 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.337 6.337 3 C 0.087 3.913 4 C -0.127 4.127 5 C -0.083 4.083 6 C -0.078 4.078 7 O -0.553 6.553 8 Si 0.768 3.232 9 C 0.101 3.899 10 O -0.308 6.308 11 C 0.033 3.967 12 C 0.517 3.483 13 O -0.566 6.566 14 N -0.695 5.695 15 C 0.111 3.889 16 H 0.089 0.911 17 C -0.117 4.117 18 C -0.105 4.105 19 H 0.105 0.895 20 C 0.110 3.890 21 N -0.700 5.700 22 C 0.703 3.297 23 O -0.587 6.587 24 N -0.677 5.677 25 C 0.528 3.472 26 O -0.493 6.493 27 C -0.139 4.139 28 C -0.163 4.163 29 C -0.158 4.158 30 H 0.113 0.887 31 H 0.070 0.930 32 H 0.065 0.935 33 H 0.141 0.859 34 H 0.077 0.923 35 H 0.391 0.609 36 H -0.291 1.291 37 H -0.282 1.282 38 H 0.125 0.875 39 H 0.120 0.880 40 H 0.419 0.581 41 H 0.096 0.904 42 H 0.122 0.878 43 H 0.158 0.842 44 H 0.453 0.547 45 H 0.437 0.563 46 H 0.108 0.892 47 H 0.063 0.937 48 H 0.168 0.832 49 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.976 1.096 0.055 5.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.251 6.251 3 C 0.042 3.958 4 C -0.145 4.145 5 C -0.084 4.084 6 C -0.186 4.186 7 O -0.362 6.362 8 Si 0.672 3.328 9 C 0.056 3.944 10 O -0.221 6.221 11 C -0.045 4.045 12 C 0.303 3.697 13 O -0.444 6.444 14 N -0.349 5.349 15 C 0.006 3.994 16 H 0.107 0.893 17 C -0.155 4.155 18 C -0.124 4.124 19 H 0.124 0.876 20 C 0.002 3.998 21 N -0.365 5.365 22 C 0.402 3.598 23 O -0.463 6.463 24 N -0.348 5.348 25 C 0.315 3.685 26 O -0.363 6.363 27 C -0.178 4.178 28 C -0.182 4.182 29 C -0.176 4.176 30 H 0.132 0.868 31 H 0.089 0.911 32 H 0.083 0.917 33 H 0.158 0.842 34 H 0.095 0.905 35 H 0.240 0.760 36 H -0.218 1.218 37 H -0.209 1.209 38 H 0.142 0.858 39 H 0.137 0.863 40 H 0.257 0.743 41 H 0.114 0.886 42 H 0.140 0.860 43 H 0.175 0.825 44 H 0.301 0.699 45 H 0.280 0.720 46 H 0.126 0.874 47 H 0.082 0.918 48 H 0.185 0.815 49 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -4.143 0.322 -0.012 4.156 hybrid contribution -0.275 1.020 -0.691 1.262 sum -4.418 1.342 -0.703 4.671 Atomic orbital electron populations 1.23352 0.76328 1.05560 1.02448 1.86079 1.23475 1.26480 1.89073 1.18916 0.91818 0.85353 0.99703 1.20228 0.92710 0.97005 1.04549 1.18473 0.94084 0.90596 1.05220 1.24869 0.94195 1.11768 0.87761 1.86539 1.28364 1.90999 1.30324 0.94107 0.77269 0.73369 0.88061 1.18797 0.91540 0.84510 0.99555 1.86173 1.35123 1.11761 1.89070 1.22734 0.92828 0.82359 1.06556 1.20458 0.88302 0.85406 0.75541 1.90765 1.16640 1.87275 1.49692 1.45357 1.11055 1.03771 1.74679 1.21889 0.95858 0.83954 0.97700 0.89317 1.23339 1.01067 0.96167 0.94949 1.22808 1.00299 0.90532 0.98775 0.87648 1.22282 0.97488 0.94872 0.85206 1.45520 1.28126 1.52335 1.10523 1.16069 0.82459 0.79813 0.81457 1.91075 1.35114 1.42684 1.77465 1.44365 1.30550 1.49402 1.10450 1.21180 0.79532 0.76072 0.91752 1.90882 1.63138 1.49630 1.32691 1.23464 0.98441 0.98621 0.97257 1.21387 0.92043 1.00029 1.04700 1.21405 1.01568 0.90824 1.03824 0.86843 0.91107 0.91680 0.84205 0.90467 0.75974 1.21809 1.20924 0.85765 0.86258 0.74301 0.88573 0.85986 0.82484 0.69920 0.72025 0.87406 0.91779 0.81452 0.82023 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.03 16 2 O -0.34 -1.27 10.50 -93.40 -0.98 -2.26 16 3 C 0.09 0.37 6.69 22.49 0.15 0.52 16 4 C -0.13 -0.82 8.59 22.36 0.19 -0.62 16 5 C -0.08 -0.62 5.31 -19.78 -0.10 -0.72 16 6 C -0.08 -0.53 2.36 71.24 0.17 -0.36 16 7 O -0.55 -5.37 12.86 -148.98 -1.92 -7.28 16 8 Si 0.77 2.39 30.19 68.60 2.07 4.46 16 9 C 0.10 0.53 6.66 22.49 0.15 0.68 16 10 O -0.31 -2.01 9.00 -74.34 -0.67 -2.68 16 11 C 0.03 -0.12 5.22 71.24 0.37 0.26 16 12 C 0.52 0.51 7.91 87.66 0.69 1.20 16 13 O -0.57 -7.08 16.10 16.00 0.26 -6.82 16 14 N -0.69 5.10 5.26 -440.05 -2.32 2.79 16 15 C 0.11 -0.82 4.32 45.52 0.20 -0.62 16 16 H 0.09 -0.17 7.46 -2.38 -0.02 -0.19 16 17 C -0.12 1.69 7.26 31.12 0.23 1.91 16 18 C -0.10 1.29 3.27 -10.27 -0.03 1.25 16 19 H 0.11 -1.32 8.14 -2.39 -0.02 -1.34 16 20 C 0.11 -1.22 3.40 44.37 0.15 -1.06 16 21 N -0.70 6.98 6.14 -459.10 -2.82 4.16 16 22 C 0.70 -1.20 9.00 179.33 1.61 0.41 16 23 O -0.59 -4.63 18.04 -3.85 -0.07 -4.70 16 24 N -0.68 2.76 5.70 -440.86 -2.51 0.25 16 25 C 0.53 -2.12 8.14 87.94 0.72 -1.40 16 26 O -0.49 -1.58 18.02 -2.89 -0.05 -1.63 16 27 C -0.14 1.11 7.44 31.12 0.23 1.34 16 28 C -0.16 0.19 9.03 22.36 0.20 0.39 16 29 C -0.16 0.12 9.03 22.35 0.20 0.33 16 30 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 31 H 0.07 -0.55 7.66 -2.39 -0.02 -0.56 16 32 H 0.06 -0.44 7.66 -2.39 -0.02 -0.46 16 33 H 0.14 0.80 4.89 -2.91 -0.01 0.79 16 34 H 0.08 0.50 7.82 -2.39 -0.02 0.48 16 35 H 0.39 0.82 8.74 -74.06 -0.65 0.17 16 36 H -0.29 -2.61 6.75 99.48 0.67 -1.94 16 37 H -0.28 -1.83 7.11 99.48 0.71 -1.13 16 38 H 0.12 -1.26 7.66 -2.39 -0.02 -1.28 16 39 H 0.12 -1.10 7.66 -2.39 -0.02 -1.12 16 40 H 0.42 -6.03 8.70 -92.71 -0.81 -6.83 16 41 H 0.10 -1.53 8.14 -2.39 -0.02 -1.55 16 42 H 0.12 -2.10 8.10 -2.39 -0.02 -2.12 16 43 H 0.16 -2.39 8.01 -2.39 -0.02 -2.41 16 44 H 0.45 -6.32 8.96 -92.71 -0.83 -7.15 16 45 H 0.44 -2.45 8.96 -92.71 -0.83 -3.28 16 46 H 0.11 -0.99 8.00 -2.39 -0.02 -1.01 16 47 H 0.06 -0.24 8.14 -2.39 -0.02 -0.26 16 48 H 0.17 -1.53 6.29 -2.91 -0.02 -1.55 16 49 H 0.16 -1.12 6.29 -2.91 -0.02 -1.14 16 Total: 0.00 -39.13 414.58 -4.80 -43.93 By element: Atomic # 1 Polarization: -32.71 SS G_CDS: -2.03 Total: -34.75 kcal Atomic # 6 Polarization: -1.71 SS G_CDS: 6.24 Total: 4.53 kcal Atomic # 7 Polarization: 14.84 SS G_CDS: -7.65 Total: 7.19 kcal Atomic # 8 Polarization: -21.94 SS G_CDS: -3.43 Total: -25.37 kcal Atomic # 14 Polarization: 2.39 SS G_CDS: 2.07 Total: 4.46 kcal Total: -39.13 -4.80 -43.93 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.876 kcal (2) G-P(sol) polarization free energy of solvation -39.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -116.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.800 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.931 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds