Wall clock time and date at job start Tue Mar 9 2021 13:38:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35902 * 116.99828 * 2 1 4 4 C 1.38613 * 120.02684 * 179.97438 * 3 2 1 5 5 C 1.38655 * 119.89301 * 180.02562 * 4 3 2 6 6 O 1.35896 * 120.03014 * 180.02562 * 5 4 3 7 7 C 1.42898 * 117.00018 * 359.97438 * 6 5 4 8 8 C 1.50699 * 109.46956 * 179.97438 * 7 6 5 9 9 O 1.21277 * 120.00256 * 0.02562 * 8 7 6 10 10 N 1.34785 * 119.99625 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99897 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84580 * 336.19949 * 11 10 8 13 13 C 1.53778 * 113.61417 * 107.50057 * 11 10 8 14 14 C 1.53780 * 87.07994 * 89.11640 * 13 11 10 15 15 H 1.08997 * 113.61300 * 270.88168 * 14 13 11 16 16 C 1.53003 * 113.69004 * 139.99177 * 14 13 11 17 17 N 1.47307 * 110.59939 * 84.59357 * 16 14 13 18 18 C 1.34534 * 106.61757 * 118.52697 * 17 16 14 19 19 O 1.21543 * 123.76716 * 179.97438 * 18 17 16 20 20 N 1.33790 * 112.45771 * 359.97438 * 18 17 16 21 21 C 1.35116 * 111.68450 * 0.09271 * 20 18 17 22 22 O 1.21241 * 127.33378 * 179.97438 * 21 20 18 23 23 C 1.53768 * 113.61404 * 204.99933 * 11 10 8 24 24 C 1.38755 * 119.94388 * 0.02562 * 5 4 3 25 25 C 1.50699 * 119.97468 * 179.97438 * 24 5 4 26 26 O 1.42907 * 109.46603 * 75.00186 * 25 24 5 27 27 Si 1.86298 * 109.47032 * 194.99489 * 25 24 5 28 28 C 1.38198 * 120.05029 * 0.26760 * 24 5 4 29 29 C 1.38160 * 120.11327 * 359.45772 * 28 24 5 30 30 H 1.09004 * 109.46771 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47418 * 300.00062 * 1 2 3 32 32 H 1.08999 * 109.46653 * 60.00426 * 1 2 3 33 33 H 1.08000 * 120.05798 * 0.04577 * 4 3 2 34 34 H 1.08997 * 109.47262 * 300.00258 * 7 6 5 35 35 H 1.09009 * 109.46648 * 59.99802 * 7 6 5 36 36 H 0.97001 * 119.99828 * 0.02562 * 10 8 7 37 37 H 1.08999 * 113.61939 * 203.66777 * 13 11 10 38 38 H 1.09004 * 113.61819 * 334.56714 * 13 11 10 39 39 H 1.08997 * 110.53217 * 321.76667 * 16 14 13 40 40 H 0.97001 * 126.69477 * 298.56113 * 17 16 14 41 41 H 0.96995 * 124.17435 * 180.02562 * 20 18 17 42 42 H 1.08997 * 113.61672 * 25.43674 * 23 11 10 43 43 H 1.09006 * 113.61722 * 156.33770 * 23 11 10 44 44 H 1.08996 * 109.47117 * 315.00099 * 25 24 5 45 45 H 0.96697 * 114.00527 * 59.99993 * 26 25 24 46 46 H 1.48506 * 109.99834 * 58.68765 * 27 25 24 47 47 H 1.48502 * 110.00011 * 180.02562 * 27 25 24 48 48 H 1.08005 * 119.94213 * 179.72405 * 28 24 5 49 49 H 1.07996 * 119.97592 * 180.25205 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0567 2.5211 0.0011 6 8 5.4136 2.5961 0.0011 7 6 6.1316 1.3606 0.0011 8 6 7.6125 1.6403 0.0004 9 8 8.0134 2.7849 0.0005 10 7 8.4913 0.6184 -0.0002 11 6 9.9308 0.8902 -0.0002 12 1 10.1761 1.8721 -0.4051 13 6 10.6149 0.5875 1.3433 14 6 10.8309 -0.8428 0.8214 15 1 10.0060 -1.5188 1.0461 16 6 12.1962 -1.4301 1.1847 17 7 12.1632 -2.0230 2.5328 18 6 12.4372 -3.3318 2.3843 19 8 12.4902 -4.1199 3.3081 20 7 12.6449 -3.6687 1.1063 21 6 12.5282 -2.6031 0.2838 22 8 12.6593 -2.5867 -0.9214 23 6 10.7729 -0.2499 -0.5963 24 6 3.2971 3.6822 0.0016 25 6 3.9773 5.0269 0.0028 26 8 4.5039 5.2954 -1.2983 27 14 2.7435 6.3466 0.4577 28 6 1.9172 3.6065 0.0072 29 6 1.2905 2.3752 0.0009 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3632 0.5138 -0.8900 33 1 4.0197 0.3793 0.0002 34 1 5.8700 0.7883 0.8910 35 1 5.8699 0.7883 -0.8890 36 1 8.1705 -0.2971 -0.0006 37 1 11.5413 1.1411 1.4962 38 1 9.9414 0.6431 2.1986 39 1 12.9705 -0.6656 1.1210 40 1 11.9792 -1.5603 3.3652 41 1 12.8545 -4.5671 0.8069 42 1 10.2271 -0.8704 -1.3071 43 1 11.7426 0.0747 -0.9738 44 1 4.7895 5.0226 0.7297 45 1 3.8356 5.3143 -1.9970 46 1 2.1650 6.0615 1.7954 47 1 3.4019 7.6777 0.4618 48 1 1.3276 4.5114 0.0121 49 1 0.2120 2.3186 0.0012 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:45 Heat of formation + Delta-G solvation = -113.889656 kcal Electronic energy + Delta-G solvation = -35987.636253 eV Core-core repulsion = 30884.708566 eV Total energy + Delta-G solvation = -5102.927687 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.155 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.54047 -41.87777 -41.30242 -40.24208 -39.74123 -39.26598 -38.16504 -37.21961 -36.85407 -35.16663 -34.19252 -32.30027 -31.49244 -30.10926 -28.99951 -28.51144 -27.05534 -26.07883 -25.32771 -23.86809 -23.74352 -22.67452 -22.50106 -21.99277 -20.71003 -19.97368 -19.52651 -18.61508 -18.09225 -18.04097 -17.88901 -17.68916 -17.56915 -17.25967 -17.23296 -16.84089 -16.79155 -16.55927 -16.47475 -16.10620 -15.91049 -15.72227 -15.46144 -15.32886 -15.15526 -15.10523 -14.63477 -14.40402 -14.24997 -13.85477 -13.77591 -13.69682 -13.46443 -13.42794 -13.22025 -12.85789 -12.61058 -12.34549 -12.18573 -12.05690 -11.94867 -11.81262 -11.76402 -11.68426 -11.50596 -11.22377 -10.96138 -10.66553 -10.28315 -10.24075 -9.72672 -9.10540 -4.98457 0.18257 0.29920 0.42123 1.25218 1.32673 1.39156 1.41495 1.71038 1.87014 1.94314 2.06863 2.11954 2.46382 2.56062 2.64290 3.08771 3.29640 3.34074 3.43480 3.54846 3.57709 3.61071 3.67697 3.75074 3.84475 3.87348 3.99404 4.00951 4.01749 4.12091 4.16382 4.21938 4.34087 4.37188 4.40620 4.45468 4.49730 4.61632 4.65953 4.70652 4.72354 4.84430 4.88969 5.00056 5.19470 5.24484 5.32465 5.42337 5.57977 5.75272 6.06205 6.21069 6.22499 6.32180 6.79033 6.99745 7.02097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.315 6.315 3 C 0.174 3.826 4 C -0.248 4.248 5 C 0.191 3.809 6 O -0.272 6.272 7 C 0.037 3.963 8 C 0.520 3.480 9 O -0.503 6.503 10 N -0.713 5.713 11 C 0.123 3.877 12 H 0.112 0.888 13 C -0.141 4.141 14 C -0.117 4.117 15 H 0.103 0.897 16 C 0.101 3.899 17 N -0.721 5.721 18 C 0.703 3.297 19 O -0.541 6.541 20 N -0.682 5.682 21 C 0.528 3.472 22 O -0.457 6.457 23 C -0.131 4.131 24 C -0.185 4.185 25 C -0.051 4.051 26 O -0.533 6.533 27 Si 0.679 3.321 28 C -0.034 4.034 29 C -0.239 4.239 30 H 0.103 0.897 31 H 0.059 0.941 32 H 0.060 0.940 33 H 0.138 0.862 34 H 0.095 0.905 35 H 0.097 0.903 36 H 0.402 0.598 37 H 0.100 0.900 38 H 0.079 0.921 39 H 0.133 0.867 40 H 0.443 0.557 41 H 0.434 0.566 42 H 0.083 0.917 43 H 0.108 0.892 44 H 0.113 0.887 45 H 0.373 0.627 46 H -0.257 1.257 47 H -0.254 1.254 48 H 0.139 0.861 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.065 -1.573 -1.375 5.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.228 6.228 3 C 0.128 3.872 4 C -0.267 4.267 5 C 0.145 3.855 6 O -0.183 6.183 7 C -0.042 4.042 8 C 0.304 3.696 9 O -0.376 6.376 10 N -0.367 5.367 11 C 0.017 3.983 12 H 0.130 0.870 13 C -0.180 4.180 14 C -0.137 4.137 15 H 0.121 0.879 16 C -0.008 4.008 17 N -0.386 5.386 18 C 0.402 3.598 19 O -0.413 6.413 20 N -0.354 5.354 21 C 0.313 3.687 22 O -0.325 6.325 23 C -0.169 4.169 24 C -0.186 4.186 25 C -0.162 4.162 26 O -0.337 6.337 27 Si 0.581 3.419 28 C -0.052 4.052 29 C -0.258 4.258 30 H 0.121 0.879 31 H 0.078 0.922 32 H 0.079 0.921 33 H 0.156 0.844 34 H 0.113 0.887 35 H 0.115 0.885 36 H 0.237 0.763 37 H 0.119 0.881 38 H 0.098 0.902 39 H 0.150 0.850 40 H 0.288 0.712 41 H 0.277 0.723 42 H 0.102 0.898 43 H 0.126 0.874 44 H 0.131 0.869 45 H 0.219 0.781 46 H -0.182 1.182 47 H -0.179 1.179 48 H 0.156 0.844 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.133 -0.404 -0.626 4.200 hybrid contribution 0.007 -1.502 0.522 1.590 sum -4.126 -1.906 -0.105 4.546 Atomic orbital electron populations 1.23152 0.77556 1.04449 1.01802 1.86078 1.22059 1.26650 1.87992 1.18682 0.91441 0.84418 0.92665 1.20390 0.92975 0.97306 1.16020 1.18395 0.81933 0.92457 0.92734 1.86261 1.14790 1.29516 1.87777 1.22506 0.90195 0.87201 1.04299 1.20003 0.87313 0.85586 0.76673 1.90812 1.79642 1.20762 1.46386 1.45475 1.05598 1.09160 1.76421 1.21817 0.79048 1.00673 0.96729 0.86980 1.23515 1.02059 0.94055 0.98380 1.22942 0.94734 0.97378 0.98641 0.87859 1.22187 1.00778 0.96014 0.81804 1.45541 1.75479 1.08029 1.09536 1.15878 0.77665 0.83578 0.82669 1.91104 1.56077 1.53043 1.41114 1.44437 1.67659 1.14508 1.08756 1.20861 0.74993 0.85249 0.87576 1.90884 1.46063 1.84172 1.11369 1.23345 1.01715 0.96681 0.95204 1.19605 0.92836 0.94517 1.11675 1.24845 1.04490 0.97554 0.89296 1.86598 1.37538 1.93554 1.16019 0.95320 0.83149 0.78101 0.85339 1.20598 0.92319 0.97359 0.94877 1.21137 1.00533 0.91747 1.12369 0.87884 0.92239 0.92149 0.84444 0.88671 0.88476 0.76296 0.88117 0.90186 0.84989 0.71244 0.72326 0.89837 0.87380 0.86937 0.78085 1.18207 1.17868 0.84357 0.84623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 9.81 101.05 0.99 0.92 16 2 O -0.32 -0.18 10.49 -19.43 -0.20 -0.38 16 3 C 0.17 0.15 6.68 -39.24 -0.26 -0.12 16 4 C -0.25 -0.21 8.97 -39.29 -0.35 -0.57 16 5 C 0.19 0.40 6.66 -39.24 -0.26 0.14 16 6 O -0.27 -0.83 8.99 -39.32 -0.35 -1.18 16 7 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 8 C 0.52 0.42 7.91 -10.98 -0.09 0.33 16 9 O -0.50 -2.96 16.10 -14.35 -0.23 -3.19 16 10 N -0.71 1.96 5.26 -53.03 -0.28 1.68 16 11 C 0.12 -0.34 4.32 -67.13 -0.29 -0.63 16 12 H 0.11 -0.08 7.46 -51.93 -0.39 -0.47 16 13 C -0.14 0.63 7.44 -25.92 -0.19 0.43 16 14 C -0.12 0.57 3.37 -89.81 -0.30 0.27 16 15 H 0.10 -0.52 8.14 -51.93 -0.42 -0.94 16 16 C 0.10 -0.44 3.47 -68.21 -0.24 -0.67 16 17 N -0.72 2.49 6.24 -59.19 -0.37 2.12 16 18 C 0.70 -0.09 9.00 -88.01 -0.79 -0.89 16 19 O -0.54 -2.33 18.04 5.33 0.10 -2.23 16 20 N -0.68 1.19 5.72 -15.71 -0.09 1.10 16 21 C 0.53 -0.93 8.00 -10.40 -0.08 -1.01 16 22 O -0.46 -0.47 17.38 5.59 0.10 -0.37 16 23 C -0.13 0.53 6.52 -25.93 -0.17 0.36 16 24 C -0.19 -0.27 5.28 -104.45 -0.55 -0.82 16 25 C -0.05 -0.10 2.37 36.01 0.09 -0.01 16 26 O -0.53 -1.42 12.88 -35.23 -0.45 -1.88 16 27 Si 0.68 -0.03 29.91 -169.99 -5.08 -5.11 16 28 C -0.03 0.02 8.65 -39.62 -0.34 -0.33 16 29 C -0.24 0.11 9.04 -39.41 -0.36 -0.24 16 30 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 31 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 32 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 33 H 0.14 -0.15 6.30 -52.49 -0.33 -0.48 16 34 H 0.10 -0.32 7.66 -51.93 -0.40 -0.71 16 35 H 0.10 -0.30 7.66 -51.92 -0.40 -0.70 16 36 H 0.40 -2.23 8.70 -40.82 -0.36 -2.59 16 37 H 0.10 -0.53 8.01 -51.93 -0.42 -0.94 16 38 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 39 H 0.13 -0.78 8.01 -51.93 -0.42 -1.20 16 40 H 0.44 -2.18 8.96 -40.82 -0.37 -2.55 16 41 H 0.43 -1.24 8.96 -40.82 -0.37 -1.61 16 42 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 43 H 0.11 -0.44 8.10 -51.93 -0.42 -0.86 16 44 H 0.11 0.43 7.82 -51.93 -0.41 0.03 16 45 H 0.37 -0.68 8.70 45.56 0.40 -0.28 16 46 H -0.26 -0.55 7.11 56.52 0.40 -0.15 16 47 H -0.25 -0.86 7.11 56.52 0.40 -0.46 16 48 H 0.14 -0.44 5.11 -52.48 -0.27 -0.71 16 49 H 0.14 -0.37 6.29 -52.49 -0.33 -0.70 16 LS Contribution 413.59 15.07 6.23 6.23 Total: 0.00 -14.93 413.59 -9.80 -24.73 By element: Atomic # 1 Polarization: -12.69 SS G_CDS: -6.15 Total: -18.83 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: -3.01 Total: -2.68 kcal Atomic # 7 Polarization: 5.64 SS G_CDS: -0.74 Total: 4.90 kcal Atomic # 8 Polarization: -8.19 SS G_CDS: -1.05 Total: -9.24 kcal Atomic # 14 Polarization: -0.03 SS G_CDS: -5.08 Total: -5.11 kcal Total LS contribution 6.23 Total: 6.23 kcal Total: -14.93 -9.80 -24.73 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.158 kcal (2) G-P(sol) polarization free energy of solvation -14.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.890 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds