Wall clock time and date at job start Tue Mar 9 2021 13:38:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35902 * 116.99828 * 2 1 4 4 C 1.38613 * 120.02684 * 179.97438 * 3 2 1 5 5 C 1.38655 * 119.89301 * 180.02562 * 4 3 2 6 6 O 1.35896 * 120.03014 * 180.02562 * 5 4 3 7 7 C 1.42898 * 117.00018 * 359.97438 * 6 5 4 8 8 C 1.50699 * 109.46956 * 179.97438 * 7 6 5 9 9 O 1.21277 * 120.00256 * 0.02562 * 8 7 6 10 10 N 1.34785 * 119.99625 * 180.02562 * 8 7 6 11 11 C 1.46499 * 119.99897 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.84580 * 336.19949 * 11 10 8 13 13 C 1.53778 * 113.61417 * 107.50057 * 11 10 8 14 14 C 1.53780 * 87.07994 * 89.11640 * 13 11 10 15 15 H 1.08997 * 113.61300 * 270.88168 * 14 13 11 16 16 C 1.53003 * 113.69004 * 139.99177 * 14 13 11 17 17 N 1.47307 * 110.59939 * 84.59357 * 16 14 13 18 18 C 1.34534 * 106.61757 * 118.52697 * 17 16 14 19 19 O 1.21543 * 123.76716 * 179.97438 * 18 17 16 20 20 N 1.33790 * 112.45771 * 359.97438 * 18 17 16 21 21 C 1.35116 * 111.68450 * 0.09271 * 20 18 17 22 22 O 1.21241 * 127.33378 * 179.97438 * 21 20 18 23 23 C 1.53768 * 113.61404 * 204.99933 * 11 10 8 24 24 C 1.38755 * 119.94388 * 0.02562 * 5 4 3 25 25 C 1.50699 * 119.97468 * 179.97438 * 24 5 4 26 26 O 1.42907 * 109.46603 * 75.00186 * 25 24 5 27 27 Si 1.86298 * 109.47032 * 194.99489 * 25 24 5 28 28 C 1.38198 * 120.05029 * 0.26760 * 24 5 4 29 29 C 1.38160 * 120.11327 * 359.45772 * 28 24 5 30 30 H 1.09004 * 109.46771 * 179.97438 * 1 2 3 31 31 H 1.08997 * 109.47418 * 300.00062 * 1 2 3 32 32 H 1.08999 * 109.46653 * 60.00426 * 1 2 3 33 33 H 1.08000 * 120.05798 * 0.04577 * 4 3 2 34 34 H 1.08997 * 109.47262 * 300.00258 * 7 6 5 35 35 H 1.09009 * 109.46648 * 59.99802 * 7 6 5 36 36 H 0.97001 * 119.99828 * 0.02562 * 10 8 7 37 37 H 1.08999 * 113.61939 * 203.66777 * 13 11 10 38 38 H 1.09004 * 113.61819 * 334.56714 * 13 11 10 39 39 H 1.08997 * 110.53217 * 321.76667 * 16 14 13 40 40 H 0.97001 * 126.69477 * 298.56113 * 17 16 14 41 41 H 0.96995 * 124.17435 * 180.02562 * 20 18 17 42 42 H 1.08997 * 113.61672 * 25.43674 * 23 11 10 43 43 H 1.09006 * 113.61722 * 156.33770 * 23 11 10 44 44 H 1.08996 * 109.47117 * 315.00099 * 25 24 5 45 45 H 0.96697 * 114.00527 * 59.99993 * 26 25 24 46 46 H 1.48506 * 109.99834 * 58.68765 * 27 25 24 47 47 H 1.48502 * 110.00011 * 180.02562 * 27 25 24 48 48 H 1.08005 * 119.94213 * 179.72405 * 28 24 5 49 49 H 1.07996 * 119.97592 * 180.25205 * 29 28 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2841 0.0005 5 6 4.0567 2.5211 0.0011 6 8 5.4136 2.5961 0.0011 7 6 6.1316 1.3606 0.0011 8 6 7.6125 1.6403 0.0004 9 8 8.0134 2.7849 0.0005 10 7 8.4913 0.6184 -0.0002 11 6 9.9308 0.8902 -0.0002 12 1 10.1761 1.8721 -0.4051 13 6 10.6149 0.5875 1.3433 14 6 10.8309 -0.8428 0.8214 15 1 10.0060 -1.5188 1.0461 16 6 12.1962 -1.4301 1.1847 17 7 12.1632 -2.0230 2.5328 18 6 12.4372 -3.3318 2.3843 19 8 12.4902 -4.1199 3.3081 20 7 12.6449 -3.6687 1.1063 21 6 12.5282 -2.6031 0.2838 22 8 12.6593 -2.5867 -0.9214 23 6 10.7729 -0.2499 -0.5963 24 6 3.2971 3.6822 0.0016 25 6 3.9773 5.0269 0.0028 26 8 4.5039 5.2954 -1.2983 27 14 2.7435 6.3466 0.4577 28 6 1.9172 3.6065 0.0072 29 6 1.2905 2.3752 0.0009 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 -0.3632 0.5138 -0.8900 33 1 4.0197 0.3793 0.0002 34 1 5.8700 0.7883 0.8910 35 1 5.8699 0.7883 -0.8890 36 1 8.1705 -0.2971 -0.0006 37 1 11.5413 1.1411 1.4962 38 1 9.9414 0.6431 2.1986 39 1 12.9705 -0.6656 1.1210 40 1 11.9792 -1.5603 3.3652 41 1 12.8545 -4.5671 0.8069 42 1 10.2271 -0.8704 -1.3071 43 1 11.7426 0.0747 -0.9738 44 1 4.7895 5.0226 0.7297 45 1 3.8356 5.3143 -1.9970 46 1 2.1650 6.0615 1.7954 47 1 3.4019 7.6777 0.4618 48 1 1.3276 4.5114 0.0121 49 1 0.2120 2.3186 0.0012 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17522896_4974312.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:43 Heat of formation + Delta-G solvation = -125.059833 kcal Electronic energy + Delta-G solvation = -35988.120629 eV Core-core repulsion = 30884.708566 eV Total energy + Delta-G solvation = -5103.412062 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.155 amu Computer time = 1.28 seconds Orbital eigenvalues (eV) -43.43461 -41.86741 -41.23062 -40.17720 -39.74741 -39.23124 -38.23536 -37.25171 -36.91044 -35.09314 -34.11579 -32.28517 -31.45154 -30.01779 -28.88477 -28.33177 -26.76994 -26.11010 -25.17899 -23.80952 -23.65721 -22.52484 -22.49065 -21.95044 -20.52019 -19.93212 -19.45126 -18.59545 -18.11412 -17.93001 -17.88074 -17.60234 -17.55421 -17.17977 -17.11706 -16.76734 -16.67639 -16.50443 -16.46265 -16.01616 -15.93560 -15.67361 -15.42865 -15.35362 -15.14611 -15.07303 -14.60667 -14.45893 -14.05891 -13.87327 -13.64343 -13.42824 -13.37138 -13.32132 -13.16277 -12.64070 -12.49083 -12.33343 -12.26156 -12.01550 -11.86466 -11.76369 -11.66992 -11.62811 -11.51159 -11.11393 -11.05261 -10.50961 -10.35000 -10.19067 -9.70307 -9.10147 -5.02839 0.20683 0.30141 0.51112 1.32409 1.36486 1.40353 1.40695 1.65195 1.91179 1.99065 2.14105 2.24696 2.54441 2.57864 2.81667 3.34878 3.47863 3.56114 3.60935 3.65230 3.73701 3.82874 3.83545 3.86473 3.92649 4.01749 4.08397 4.16393 4.29617 4.34425 4.36819 4.39813 4.43439 4.46394 4.61539 4.64106 4.77843 4.79526 4.82854 4.92097 5.01670 5.02113 5.03430 5.10818 5.23538 5.27973 5.46649 5.51859 5.77259 5.85626 6.11532 6.34664 6.35577 6.40752 6.86890 7.07126 7.08153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.331 6.331 3 C 0.163 3.837 4 C -0.254 4.254 5 C 0.174 3.826 6 O -0.304 6.304 7 C 0.033 3.967 8 C 0.518 3.482 9 O -0.565 6.565 10 N -0.694 5.694 11 C 0.110 3.890 12 H 0.088 0.912 13 C -0.131 4.131 14 C -0.105 4.105 15 H 0.110 0.890 16 C 0.108 3.892 17 N -0.703 5.703 18 C 0.703 3.297 19 O -0.589 6.589 20 N -0.678 5.678 21 C 0.531 3.469 22 O -0.485 6.485 23 C -0.123 4.123 24 C -0.202 4.202 25 C -0.067 4.067 26 O -0.557 6.557 27 Si 0.793 3.207 28 C -0.032 4.032 29 C -0.237 4.237 30 H 0.115 0.885 31 H 0.068 0.932 32 H 0.071 0.929 33 H 0.151 0.849 34 H 0.121 0.879 35 H 0.120 0.880 36 H 0.419 0.581 37 H 0.113 0.887 38 H 0.077 0.923 39 H 0.158 0.842 40 H 0.452 0.548 41 H 0.437 0.563 42 H 0.081 0.919 43 H 0.111 0.889 44 H 0.082 0.918 45 H 0.391 0.609 46 H -0.280 1.280 47 H -0.304 1.304 48 H 0.166 0.834 49 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.583 -2.192 -1.394 7.077 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.244 6.244 3 C 0.116 3.884 4 C -0.273 4.273 5 C 0.127 3.873 6 O -0.216 6.216 7 C -0.044 4.044 8 C 0.304 3.696 9 O -0.442 6.442 10 N -0.348 5.348 11 C 0.005 3.995 12 H 0.106 0.894 13 C -0.170 4.170 14 C -0.124 4.124 15 H 0.128 0.872 16 C 0.000 4.000 17 N -0.368 5.368 18 C 0.402 3.598 19 O -0.466 6.466 20 N -0.349 5.349 21 C 0.317 3.683 22 O -0.355 6.355 23 C -0.162 4.162 24 C -0.204 4.204 25 C -0.176 4.176 26 O -0.365 6.365 27 Si 0.697 3.303 28 C -0.049 4.049 29 C -0.256 4.256 30 H 0.133 0.867 31 H 0.087 0.913 32 H 0.090 0.910 33 H 0.169 0.831 34 H 0.139 0.861 35 H 0.138 0.862 36 H 0.256 0.744 37 H 0.132 0.868 38 H 0.096 0.904 39 H 0.176 0.824 40 H 0.298 0.702 41 H 0.280 0.720 42 H 0.100 0.900 43 H 0.130 0.870 44 H 0.099 0.901 45 H 0.240 0.760 46 H -0.207 1.207 47 H -0.232 1.232 48 H 0.183 0.817 49 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -5.660 -1.087 -0.675 5.802 hybrid contribution 0.519 -1.348 0.487 1.524 sum -5.141 -2.435 -0.187 5.691 Atomic orbital electron populations 1.23406 0.75956 1.05671 1.02783 1.86055 1.23808 1.26635 1.87951 1.18886 0.91630 0.85071 0.92763 1.20542 0.93508 0.97348 1.15920 1.18614 0.81710 0.93264 0.93672 1.86219 1.15598 1.31636 1.88178 1.22739 0.88656 0.86523 1.06526 1.20393 0.88365 0.85195 0.75646 1.90782 1.80624 1.23164 1.49653 1.45360 1.05436 1.09332 1.74642 1.21906 0.79106 1.00114 0.98384 0.89424 1.23482 1.02280 0.94156 0.97079 1.22855 0.94556 0.97149 0.97854 0.87152 1.22304 1.01818 0.95382 0.80485 1.45496 1.74052 1.06865 1.10347 1.15987 0.77352 0.84078 0.82385 1.91073 1.58451 1.54507 1.42539 1.44420 1.67111 1.14979 1.08380 1.21148 0.74140 0.85668 0.87295 1.90879 1.47415 1.84580 1.12577 1.23300 1.01466 0.95851 0.95571 1.19748 0.93808 0.94037 1.12775 1.25117 1.04362 0.99577 0.88506 1.86540 1.39278 1.93690 1.16972 0.94113 0.80413 0.73140 0.82593 1.20869 0.91556 0.98597 0.93871 1.21447 1.01786 0.91176 1.11188 0.86694 0.91323 0.91036 0.83102 0.86135 0.86221 0.74375 0.86824 0.90432 0.82444 0.70162 0.71976 0.89988 0.87035 0.90078 0.76016 1.20686 1.23212 0.81672 0.82165 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.09 10.49 -92.44 -0.97 -1.06 16 3 C 0.16 0.17 6.68 22.49 0.15 0.32 16 4 C -0.25 -0.47 8.97 22.46 0.20 -0.27 16 5 C 0.17 0.92 6.66 22.49 0.15 1.07 16 6 O -0.30 -2.47 8.99 -73.35 -0.66 -3.13 16 7 C 0.03 -0.03 5.22 71.24 0.37 0.34 16 8 C 0.52 1.62 7.91 87.66 0.69 2.31 16 9 O -0.56 -8.32 16.10 16.02 0.26 -8.06 16 10 N -0.69 3.54 5.26 -440.06 -2.32 1.23 16 11 C 0.11 -0.56 4.32 45.51 0.20 -0.36 16 12 H 0.09 0.05 7.46 -2.39 -0.02 0.03 16 13 C -0.13 1.25 7.44 31.12 0.23 1.48 16 14 C -0.10 1.14 3.37 -10.27 -0.03 1.11 16 15 H 0.11 -1.29 8.14 -2.39 -0.02 -1.31 16 16 C 0.11 -1.08 3.47 44.37 0.15 -0.92 16 17 N -0.70 5.55 6.24 -459.60 -2.87 2.68 16 18 C 0.70 -0.23 9.00 179.44 1.61 1.38 16 19 O -0.59 -5.52 18.04 -3.85 -0.07 -5.59 16 20 N -0.68 2.38 5.72 -440.66 -2.52 -0.14 16 21 C 0.53 -2.18 8.00 87.88 0.70 -1.47 16 22 O -0.48 -0.87 17.38 -2.91 -0.05 -0.92 16 23 C -0.12 1.05 6.52 31.12 0.20 1.25 16 24 C -0.20 -0.75 5.28 -19.75 -0.10 -0.85 16 25 C -0.07 -0.37 2.37 71.24 0.17 -0.20 16 26 O -0.56 -3.99 12.88 -148.98 -1.92 -5.91 16 27 Si 0.79 0.15 29.91 68.60 2.05 2.20 16 28 C -0.03 0.06 8.65 22.24 0.19 0.25 16 29 C -0.24 0.53 9.04 22.38 0.20 0.74 16 30 H 0.11 -1.12 8.14 -2.38 -0.02 -1.14 16 31 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 32 H 0.07 -0.66 7.66 -2.39 -0.02 -0.68 16 33 H 0.15 -0.36 6.30 -2.91 -0.02 -0.38 16 34 H 0.12 -0.81 7.66 -2.39 -0.02 -0.83 16 35 H 0.12 -0.73 7.66 -2.38 -0.02 -0.75 16 36 H 0.42 -4.90 8.70 -92.71 -0.81 -5.71 16 37 H 0.11 -1.33 8.01 -2.39 -0.02 -1.35 16 38 H 0.08 -0.63 8.14 -2.38 -0.02 -0.65 16 39 H 0.16 -2.23 8.01 -2.39 -0.02 -2.25 16 40 H 0.45 -4.99 8.96 -92.71 -0.83 -5.82 16 41 H 0.44 -2.29 8.96 -92.71 -0.83 -3.12 16 42 H 0.08 -0.62 8.14 -2.39 -0.02 -0.64 16 43 H 0.11 -0.96 8.10 -2.38 -0.02 -0.98 16 44 H 0.08 0.90 7.82 -2.39 -0.02 0.89 16 45 H 0.39 -1.07 8.70 -74.06 -0.64 -1.71 16 46 H -0.28 -1.09 7.11 99.48 0.71 -0.38 16 47 H -0.30 -2.53 7.11 99.48 0.71 -1.82 16 48 H 0.17 -1.37 5.11 -2.91 -0.01 -1.39 16 49 H 0.16 -1.26 6.29 -2.91 -0.02 -1.27 16 Total: 0.00 -38.58 413.59 -4.85 -43.43 By element: Atomic # 1 Polarization: -29.90 SS G_CDS: -2.00 Total: -31.90 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: 6.21 Total: 7.16 kcal Atomic # 7 Polarization: 11.48 SS G_CDS: -7.70 Total: 3.78 kcal Atomic # 8 Polarization: -21.25 SS G_CDS: -3.41 Total: -24.66 kcal Atomic # 14 Polarization: 0.15 SS G_CDS: 2.05 Total: 2.20 kcal Total: -38.58 -4.85 -43.43 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_4974312.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -81.631 kcal (2) G-P(sol) polarization free energy of solvation -38.577 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.429 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.28 seconds