Wall clock time and date at job start Tue Mar 9 2021 13:38:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35995 * 117.00022 * 2 1 4 4 C 1.39151 * 120.07446 * 179.97438 * 3 2 1 5 5 O 1.35994 * 120.07339 * 359.97438 * 4 3 2 6 6 C 1.42898 * 117.00031 * 179.72582 * 5 4 3 7 7 C 1.50704 * 109.46964 * 179.97438 * 6 5 4 8 8 O 1.21276 * 120.00030 * 0.02562 * 7 6 5 9 9 N 1.34780 * 119.99932 * 179.97438 * 7 6 5 10 10 C 1.46494 * 120.00137 * 180.02562 * 9 7 6 11 11 H 1.09003 * 112.85210 * 336.20106 * 10 9 7 12 12 C 1.53784 * 113.69023 * 107.46400 * 10 9 7 13 13 C 1.53788 * 87.07909 * 89.13045 * 12 10 9 14 14 H 1.08997 * 113.69121 * 270.87663 * 13 12 10 15 15 C 1.52999 * 113.61323 * 139.97955 * 13 12 10 16 16 N 1.47307 * 110.59718 * 82.50380 * 15 13 12 17 17 C 1.34530 * 106.61845 * 118.67762 * 16 15 13 18 18 O 1.21545 * 123.76882 * 180.02562 * 17 16 15 19 19 N 1.33792 * 112.45897 * 359.97438 * 17 16 15 20 20 C 1.34772 * 111.64131 * 0.23433 * 19 17 16 21 21 O 1.21236 * 127.15358 * 179.73610 * 20 19 17 22 22 C 1.53781 * 87.08045 * 25.43380 * 13 12 10 23 23 C 1.38572 * 119.85479 * 179.72496 * 4 3 2 24 24 C 1.38237 * 119.99801 * 0.26882 * 23 4 3 25 25 C 1.38257 * 120.14964 * 0.02562 * 24 23 4 26 26 C 1.50700 * 119.92727 * 180.02562 * 25 24 23 27 27 O 1.42894 * 109.46994 * 244.99824 * 26 25 24 28 28 Si 1.86297 * 109.47144 * 5.00260 * 26 25 24 29 29 C 1.38246 * 120.14191 * 359.97438 * 25 24 23 30 30 H 1.08995 * 109.46960 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47038 * 300.00120 * 1 2 3 32 32 H 1.08998 * 109.46802 * 60.00001 * 1 2 3 33 33 H 1.09004 * 109.46897 * 60.00203 * 6 5 4 34 34 H 1.08993 * 109.47604 * 300.00393 * 6 5 4 35 35 H 0.96999 * 120.00069 * 0.02562 * 9 7 6 36 36 H 1.09002 * 113.61404 * 334.58300 * 12 10 9 37 37 H 1.09004 * 113.61648 * 203.67791 * 12 10 9 38 38 H 1.09000 * 110.53620 * 319.67367 * 15 13 12 39 39 H 0.96998 * 126.69567 * 298.71335 * 16 15 13 40 40 H 0.97001 * 124.17607 * 179.97438 * 19 17 16 41 41 H 1.08999 * 113.61593 * 89.11689 * 22 13 12 42 42 H 1.09001 * 113.61843 * 219.93895 * 22 13 12 43 43 H 1.07998 * 119.99980 * 180.29626 * 23 4 3 44 44 H 1.08003 * 119.92909 * 179.97438 * 24 23 4 45 45 H 1.09003 * 109.46755 * 125.00189 * 26 25 24 46 46 H 0.96701 * 114.00196 * 60.00377 * 27 26 25 47 47 H 1.48497 * 110.00312 * 58.67613 * 28 26 25 48 48 H 1.48498 * 109.99985 * 179.97438 * 28 26 25 49 49 H 1.08000 * 119.99346 * 179.97438 * 29 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2863 0.0005 5 8 4.1796 0.1477 0.0016 6 6 5.6003 0.3007 -0.0040 7 6 6.2519 -1.0582 -0.0013 8 8 5.5670 -2.0590 0.0044 9 7 7.5957 -1.1612 -0.0062 10 6 8.2292 -2.4821 -0.0041 11 1 7.5851 -3.2598 0.4065 12 6 8.8722 -2.8612 -1.3486 13 6 10.1553 -2.1864 -0.8356 14 1 10.2126 -1.1224 -1.0652 15 6 11.4339 -2.9429 -1.2014 16 7 11.8584 -2.6104 -2.5723 17 6 13.0757 -2.0465 -2.4720 18 8 13.7178 -1.6513 -3.4253 19 7 13.5000 -1.9683 -1.2056 20 6 12.5975 -2.4818 -0.3464 21 8 12.6955 -2.5579 0.8596 22 6 9.6493 -2.4834 0.5859 23 6 4.0603 2.5234 -0.0052 24 6 3.3030 3.6799 -0.0059 25 6 1.9224 3.6058 -0.0003 26 6 1.1017 4.8697 -0.0016 27 8 0.3695 4.9634 1.2219 28 14 2.2303 6.3429 -0.1644 29 6 1.2933 2.3748 0.0055 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8900 33 1 5.9097 0.8534 0.8831 34 1 5.9034 0.8476 -0.8967 35 1 8.1435 -0.3607 -0.0111 36 1 8.4251 -2.3553 -2.2044 37 1 8.9734 -3.9363 -1.4965 38 1 11.2858 -4.0176 -1.0959 39 1 11.3578 -2.7670 -3.3882 40 1 14.3535 -1.5921 -0.9391 41 1 9.9630 -3.4553 0.9669 42 1 9.8308 -1.6733 1.2922 43 1 5.1386 2.5840 -0.0097 44 1 3.7908 4.6434 -0.0100 45 1 0.4061 4.8503 -0.8407 46 1 0.9258 4.9853 2.0126 47 1 3.0207 6.2412 -1.4174 48 1 1.4330 7.5956 -0.1676 49 1 0.2147 2.3197 0.0103 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17522896_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:38:52 Heat of formation + Delta-G solvation = -111.966772 kcal Electronic energy + Delta-G solvation = -35611.637973 eV Core-core repulsion = 30508.793669 eV Total energy + Delta-G solvation = -5102.844305 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.155 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -43.57309 -41.85962 -41.30981 -40.03791 -39.63312 -39.02265 -38.78321 -37.23400 -36.94103 -35.18879 -34.20828 -32.07587 -31.50053 -30.20451 -29.07197 -28.42865 -27.06656 -26.26221 -25.28994 -23.85200 -23.66931 -22.73538 -22.57977 -21.96035 -20.72690 -19.82347 -19.52548 -18.57470 -18.44059 -18.05258 -17.98169 -17.77650 -17.58250 -17.37586 -17.05006 -16.93455 -16.65589 -16.54152 -16.17611 -16.12391 -15.88362 -15.74796 -15.66776 -15.38440 -15.35546 -15.15173 -14.75425 -14.31549 -14.23695 -13.86036 -13.78424 -13.72133 -13.63642 -13.43234 -12.87476 -12.65547 -12.54563 -12.36875 -12.22453 -12.13683 -12.00936 -11.96201 -11.81946 -11.78464 -11.51882 -11.23624 -10.96951 -10.67651 -10.49058 -10.29712 -9.82376 -8.88733 -5.08718 0.14086 0.26520 0.41595 1.24184 1.24344 1.33666 1.40580 1.58936 1.86202 1.93038 1.93789 2.28905 2.43904 2.53810 2.63367 3.07578 3.28995 3.32201 3.39280 3.41516 3.54245 3.55928 3.61013 3.70815 3.75732 3.85588 3.89698 4.00561 4.09391 4.15951 4.22356 4.26779 4.30963 4.39266 4.44062 4.46247 4.52916 4.60237 4.63054 4.64826 4.71239 4.82893 4.87602 4.96422 5.06257 5.31065 5.33969 5.51985 5.57049 5.74449 5.91858 6.20517 6.21748 6.50820 6.52578 6.98527 7.01365 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.108 3.892 4 C 0.104 3.896 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.519 3.481 8 O -0.504 6.504 9 N -0.713 5.713 10 C 0.123 3.877 11 H 0.112 0.888 12 C -0.142 4.142 13 C -0.116 4.116 14 H 0.103 0.897 15 C 0.101 3.899 16 N -0.721 5.721 17 C 0.703 3.297 18 O -0.540 6.540 19 N -0.681 5.681 20 C 0.527 3.473 21 O -0.458 6.458 22 C -0.131 4.131 23 C -0.169 4.169 24 C -0.112 4.112 25 C -0.115 4.115 26 C -0.066 4.066 27 O -0.540 6.540 28 Si 0.689 3.311 29 C -0.146 4.146 30 H 0.103 0.897 31 H 0.057 0.943 32 H 0.055 0.945 33 H 0.096 0.904 34 H 0.094 0.906 35 H 0.402 0.598 36 H 0.080 0.920 37 H 0.100 0.900 38 H 0.132 0.868 39 H 0.443 0.557 40 H 0.434 0.566 41 H 0.107 0.893 42 H 0.083 0.917 43 H 0.139 0.861 44 H 0.132 0.868 45 H 0.113 0.887 46 H 0.380 0.620 47 H -0.257 1.257 48 H -0.255 1.255 49 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.471 1.834 1.772 2.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.062 3.938 4 C 0.058 3.942 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.304 3.696 8 O -0.377 6.377 9 N -0.367 5.367 10 C 0.017 3.983 11 H 0.130 0.870 12 C -0.180 4.180 13 C -0.136 4.136 14 H 0.121 0.879 15 C -0.008 4.008 16 N -0.386 5.386 17 C 0.402 3.598 18 O -0.413 6.413 19 N -0.352 5.352 20 C 0.313 3.687 21 O -0.327 6.327 22 C -0.169 4.169 23 C -0.188 4.188 24 C -0.130 4.130 25 C -0.116 4.116 26 C -0.177 4.177 27 O -0.346 6.346 28 Si 0.590 3.410 29 C -0.165 4.165 30 H 0.122 0.878 31 H 0.076 0.924 32 H 0.074 0.926 33 H 0.114 0.886 34 H 0.112 0.888 35 H 0.237 0.763 36 H 0.098 0.902 37 H 0.119 0.881 38 H 0.150 0.850 39 H 0.288 0.712 40 H 0.277 0.723 41 H 0.126 0.874 42 H 0.102 0.898 43 H 0.157 0.843 44 H 0.150 0.850 45 H 0.130 0.870 46 H 0.227 0.773 47 H -0.182 1.182 48 H -0.180 1.180 49 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 0.990 1.522 1.030 2.087 hybrid contribution 0.156 0.364 -0.625 0.740 sum 1.146 1.886 0.405 2.244 Atomic orbital electron populations 1.23134 0.78089 1.04432 1.01376 1.86248 1.21356 1.25326 1.88533 1.18280 0.89016 0.85569 1.00982 1.18266 0.88285 0.85730 1.01922 1.86276 1.15953 1.27771 1.88905 1.22467 0.81407 0.96122 1.04058 1.20029 0.82308 0.90627 0.76630 1.90806 1.62514 1.37991 1.46399 1.45472 1.05875 1.08874 1.76443 1.21815 0.94015 0.85694 0.96754 0.87003 1.23515 0.94194 1.01901 0.98425 1.22928 0.91630 1.00448 0.98603 0.87863 1.22190 0.94137 1.02905 0.81539 1.45542 1.18744 1.65146 1.09143 1.15888 0.82378 0.78707 0.82858 1.91106 1.59290 1.52487 1.38419 1.44363 1.23035 1.59325 1.08494 1.20787 0.84356 0.76308 0.87298 1.90883 1.78147 1.52299 1.11331 1.23343 0.93707 1.04700 0.95192 1.20988 1.00452 0.90687 1.06672 1.20666 0.92746 0.97768 1.01838 1.20045 0.93713 0.95222 1.02571 1.25037 1.00852 1.01622 0.90174 1.86504 1.36391 1.96611 1.15048 0.94755 0.81825 0.76704 0.87672 1.20944 1.00399 0.90425 1.04720 0.87840 0.92410 0.92620 0.88631 0.88787 0.76297 0.90158 0.88116 0.85030 0.71243 0.72296 0.87435 0.89811 0.84289 0.85027 0.86968 0.77312 1.18193 1.17978 0.84207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.19 10.28 -34.23 -0.35 -1.54 16 3 C 0.11 0.31 6.70 -39.12 -0.26 0.05 16 4 C 0.10 0.22 6.70 -39.12 -0.26 -0.05 16 5 O -0.28 -0.86 9.45 -47.35 -0.45 -1.31 16 6 C 0.04 -0.06 5.22 36.01 0.19 0.12 16 7 C 0.52 0.14 7.91 -10.98 -0.09 0.05 16 8 O -0.50 -2.79 16.10 -14.35 -0.23 -3.02 16 9 N -0.71 2.41 5.27 -53.02 -0.28 2.13 16 10 C 0.12 -0.40 4.32 -67.12 -0.29 -0.69 16 11 H 0.11 -0.14 7.46 -51.93 -0.39 -0.52 16 12 C -0.14 0.69 7.44 -25.91 -0.19 0.49 16 13 C -0.12 0.62 3.37 -89.80 -0.30 0.32 16 14 H 0.10 -0.57 8.14 -51.93 -0.42 -0.99 16 15 C 0.10 -0.47 3.42 -68.21 -0.23 -0.71 16 16 N -0.72 2.73 6.24 -59.19 -0.37 2.36 16 17 C 0.70 -0.33 8.99 -88.02 -0.79 -1.12 16 18 O -0.54 -2.16 18.04 5.33 0.10 -2.07 16 19 N -0.68 1.42 5.70 -15.79 -0.09 1.33 16 20 C 0.53 -1.11 8.01 -10.55 -0.08 -1.20 16 21 O -0.46 -0.32 17.50 5.60 0.10 -0.22 16 22 C -0.13 0.60 6.67 -25.92 -0.17 0.43 16 23 C -0.17 0.15 9.04 -39.46 -0.36 -0.20 16 24 C -0.11 0.13 8.66 -39.57 -0.34 -0.21 16 25 C -0.11 0.00 5.35 -104.61 -0.56 -0.56 16 26 C -0.07 0.04 2.80 36.01 0.10 0.14 16 27 O -0.54 0.08 12.83 -35.23 -0.45 -0.37 16 28 Si 0.69 -1.13 29.80 -169.99 -5.06 -6.19 16 29 C -0.15 -0.17 8.67 -39.46 -0.34 -0.52 16 30 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.06 -0.06 7.65 -51.93 -0.40 -0.46 16 32 H 0.06 -0.06 7.68 -51.93 -0.40 -0.46 16 33 H 0.10 -0.43 7.66 -51.93 -0.40 -0.83 16 34 H 0.09 -0.41 7.66 -51.93 -0.40 -0.81 16 35 H 0.40 -2.55 8.70 -40.82 -0.36 -2.90 16 36 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 37 H 0.10 -0.57 8.03 -51.93 -0.42 -0.99 16 38 H 0.13 -0.82 8.05 -51.93 -0.42 -1.24 16 39 H 0.44 -2.32 8.96 -40.82 -0.37 -2.68 16 40 H 0.43 -1.38 8.96 -40.82 -0.37 -1.75 16 41 H 0.11 -0.50 8.10 -51.93 -0.42 -0.92 16 42 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 43 H 0.14 -0.58 6.30 -52.49 -0.33 -0.91 16 44 H 0.13 -0.46 4.89 -52.48 -0.26 -0.72 16 45 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 46 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 47 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 48 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 49 H 0.14 0.04 6.30 -52.49 -0.33 -0.29 16 LS Contribution 414.18 15.07 6.24 6.24 Total: 0.00 -15.22 414.18 -10.00 -25.22 By element: Atomic # 1 Polarization: -13.75 SS G_CDS: -6.15 Total: -19.89 kcal Atomic # 6 Polarization: 0.34 SS G_CDS: -3.00 Total: -2.66 kcal Atomic # 7 Polarization: 6.55 SS G_CDS: -0.74 Total: 5.82 kcal Atomic # 8 Polarization: -7.24 SS G_CDS: -1.29 Total: -8.53 kcal Atomic # 14 Polarization: -1.13 SS G_CDS: -5.06 Total: -6.19 kcal Total LS contribution 6.24 Total: 6.24 kcal Total: -15.22 -10.00 -25.22 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17522896_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.748 kcal (2) G-P(sol) polarization free energy of solvation -15.223 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.970 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.996 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.219 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds