Wall clock time and date at job start Tue Mar 9 2021 13:40:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34235 * 116.99933 * 2 1 4 4 O 1.20815 * 119.99931 * 359.97438 * 3 2 1 5 5 C 1.50698 * 119.99750 * 180.02562 * 3 2 1 6 6 C 1.52998 * 109.47325 * 180.02562 * 5 3 2 7 7 C 1.52995 * 109.47618 * 179.97438 * 6 5 3 8 8 H 1.09007 * 112.84694 * 43.80067 * 7 6 5 9 9 C 1.53782 * 113.61561 * 174.99594 * 7 6 5 10 10 C 1.53781 * 87.07854 * 139.98019 * 9 7 6 11 11 H 1.09002 * 113.61190 * 219.93377 * 10 9 7 12 12 N 1.46506 * 113.61485 * 89.12093 * 10 9 7 13 13 C 1.34777 * 120.00264 * 155.00059 * 12 10 9 14 14 O 1.21695 * 119.99811 * 359.97438 * 13 12 10 15 15 C 1.46426 * 119.99830 * 180.02562 * 13 12 10 16 16 C 1.34807 * 119.99543 * 179.97438 * 15 13 12 17 17 C 1.47216 * 119.99573 * 179.97438 * 16 15 13 18 18 C 1.39829 * 120.16975 * 359.72186 * 17 16 15 19 19 C 1.37889 * 119.82417 * 179.79155 * 18 17 16 20 20 C 1.38397 * 120.17340 * 0.46228 * 19 18 17 21 21 C 1.50696 * 119.83189 * 179.76754 * 20 19 18 22 22 O 1.42908 * 109.47076 * 245.02626 * 21 20 19 23 23 Si 1.86299 * 109.47157 * 5.02191 * 21 20 19 24 24 C 1.38407 * 120.34254 * 359.79018 * 20 19 18 25 25 C 1.37888 * 120.17191 * 359.97438 * 24 20 19 26 26 C 1.53777 * 113.61271 * 272.49675 * 7 6 5 27 27 H 1.09000 * 109.47048 * 300.00235 * 1 2 3 28 28 H 1.08995 * 109.47211 * 60.00038 * 1 2 3 29 29 H 1.09004 * 109.47144 * 179.97438 * 1 2 3 30 30 H 1.09001 * 109.47403 * 59.99536 * 5 3 2 31 31 H 1.09008 * 109.46869 * 299.99624 * 5 3 2 32 32 H 1.09001 * 109.47325 * 59.99407 * 6 5 3 33 33 H 1.09010 * 109.46820 * 300.00150 * 6 5 3 34 34 H 1.09002 * 113.61323 * 25.43660 * 9 7 6 35 35 H 1.08995 * 113.69350 * 254.53982 * 9 7 6 36 36 H 0.96999 * 119.99689 * 334.99452 * 12 10 9 37 37 H 1.07999 * 120.00128 * 359.97438 * 15 13 12 38 38 H 1.07999 * 120.00329 * 359.97438 * 16 15 13 39 39 H 1.08005 * 120.08910 * 0.02562 * 18 17 16 40 40 H 1.08009 * 119.91476 * 180.22961 * 19 18 17 41 41 H 1.08995 * 109.47481 * 125.02459 * 21 20 19 42 42 H 0.96703 * 113.99986 * 180.02562 * 22 21 20 43 43 H 1.48502 * 109.99982 * 300.00185 * 23 21 20 44 44 H 1.48500 * 109.99848 * 61.31910 * 23 21 20 45 45 H 1.07998 * 119.91105 * 179.97438 * 24 20 19 46 46 H 1.07996 * 120.09034 * 179.97438 * 25 24 20 47 47 H 1.09003 * 113.61817 * 105.47004 * 26 7 6 48 48 H 1.08997 * 113.61878 * 334.56171 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0002 2.7420 0.0002 7 6 5.5280 2.8221 0.0002 8 1 5.9886 2.1206 -0.6954 9 6 6.0697 4.2562 -0.1219 10 6 7.1384 3.8563 0.9091 11 1 7.3510 4.6347 1.6419 12 7 8.3507 3.2931 0.3095 13 6 9.5240 3.3634 0.9690 14 8 9.5764 3.8950 2.0624 15 6 10.7357 2.8010 0.3694 16 6 11.9093 2.8718 1.0288 17 6 13.1274 2.3058 0.4262 18 6 13.0700 1.6890 -0.8273 19 6 14.2161 1.1652 -1.3870 20 6 15.4193 1.2402 -0.7072 21 6 16.6661 0.6605 -1.3237 22 8 17.1256 -0.4348 -0.5291 23 14 16.2863 0.0614 -3.0464 24 6 15.4832 1.8445 0.5364 25 6 14.3467 2.3774 1.1072 26 6 6.1463 2.7924 1.4079 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8899 29 1 -0.3634 -1.0277 -0.0005 30 1 3.9557 0.7809 -0.8908 31 1 3.9563 0.7806 0.8893 32 1 3.6108 3.2357 0.8906 33 1 3.6100 3.2368 -0.8894 34 1 5.3775 5.0167 0.2394 35 1 6.4774 4.4881 -1.1058 36 1 8.3089 2.8696 -0.5622 37 1 10.6891 2.3295 -0.6012 38 1 11.9559 3.3436 1.9992 39 1 12.1311 1.6264 -1.3575 40 1 14.1741 0.6917 -2.3569 41 1 17.4398 1.4270 -1.3680 42 1 17.9272 -0.8571 -0.8672 43 1 15.2328 -0.9842 -2.9997 44 1 15.8377 1.1969 -3.8917 45 1 16.4256 1.8988 1.0609 46 1 14.3980 2.8482 2.0777 47 1 6.6158 1.8411 1.6586 48 1 5.4751 3.1527 2.1874 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17523010_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:38 Heat of formation + Delta-G solvation = -89.622992 kcal Electronic energy + Delta-G solvation = -28045.519055 eV Core-core repulsion = 23840.085995 eV Total energy + Delta-G solvation = -4205.433059 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.166 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.56712 -41.19758 -40.65304 -39.48672 -37.78824 -37.53551 -35.21632 -35.03748 -33.27352 -32.31659 -31.35155 -29.16848 -27.53344 -26.85591 -26.59240 -24.39512 -24.05299 -23.12589 -22.10115 -21.58906 -20.49348 -20.27840 -18.76313 -18.52285 -18.45703 -17.65009 -17.50606 -17.43284 -17.12723 -16.68680 -16.33248 -15.96754 -15.92839 -15.42490 -15.30837 -15.11449 -15.11156 -14.69233 -14.38968 -14.33656 -14.11545 -14.01770 -13.83773 -13.63905 -13.52907 -13.44490 -13.08209 -13.00999 -12.73555 -12.35428 -12.25803 -12.03990 -12.00437 -11.95717 -11.77294 -11.61069 -11.36784 -11.33327 -11.16593 -10.93311 -10.39770 -10.08562 -10.06338 -9.30993 -5.04632 -0.60245 0.28472 0.86135 1.19564 1.22874 1.56577 1.73863 1.88475 2.11933 2.25473 2.71183 3.28766 3.39045 3.41747 3.50245 3.62440 3.65892 3.73761 3.75546 3.78549 3.82360 4.04994 4.07937 4.11520 4.15076 4.16911 4.20099 4.24751 4.26874 4.36389 4.43771 4.44780 4.60545 4.65853 4.69048 4.72111 4.78302 4.79650 4.86185 4.93548 4.98852 5.02481 5.05482 5.12698 5.22199 5.30516 5.38771 5.42952 5.52528 5.59861 5.78472 6.49063 6.53367 6.75985 7.24045 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.507 6.507 5 C -0.113 4.113 6 C -0.099 4.099 7 C -0.112 4.112 8 H 0.092 0.908 9 C -0.141 4.141 10 C 0.118 3.882 11 H 0.104 0.896 12 N -0.709 5.709 13 C 0.551 3.449 14 O -0.541 6.541 15 C -0.216 4.216 16 C -0.013 4.013 17 C -0.074 4.074 18 C -0.094 4.094 19 C -0.125 4.125 20 C -0.062 4.062 21 C -0.075 4.075 22 O -0.545 6.545 23 Si 0.683 3.317 24 C -0.092 4.092 25 C -0.090 4.090 26 C -0.149 4.149 27 H 0.064 0.936 28 H 0.063 0.937 29 H 0.103 0.897 30 H 0.106 0.894 31 H 0.107 0.893 32 H 0.076 0.924 33 H 0.075 0.925 34 H 0.098 0.902 35 H 0.075 0.925 36 H 0.402 0.598 37 H 0.130 0.870 38 H 0.139 0.861 39 H 0.131 0.869 40 H 0.122 0.878 41 H 0.076 0.924 42 H 0.383 0.617 43 H -0.250 1.250 44 H -0.254 1.254 45 H 0.132 0.868 46 H 0.134 0.866 47 H 0.072 0.928 48 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.579 -3.245 -4.565 6.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.395 6.395 5 C -0.151 4.151 6 C -0.137 4.137 7 C -0.130 4.130 8 H 0.111 0.889 9 C -0.179 4.179 10 C 0.013 3.987 11 H 0.122 0.878 12 N -0.360 5.360 13 C 0.340 3.660 14 O -0.419 6.419 15 C -0.236 4.236 16 C -0.033 4.033 17 C -0.074 4.074 18 C -0.112 4.112 19 C -0.143 4.143 20 C -0.063 4.063 21 C -0.186 4.186 22 O -0.351 6.351 23 Si 0.585 3.415 24 C -0.110 4.110 25 C -0.108 4.108 26 C -0.187 4.187 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.124 0.876 31 H 0.125 0.875 32 H 0.095 0.905 33 H 0.094 0.906 34 H 0.117 0.883 35 H 0.093 0.907 36 H 0.236 0.764 37 H 0.147 0.853 38 H 0.157 0.843 39 H 0.149 0.851 40 H 0.139 0.861 41 H 0.094 0.906 42 H 0.231 0.769 43 H -0.175 1.175 44 H -0.179 1.179 45 H 0.150 0.850 46 H 0.152 0.848 47 H 0.091 0.909 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 2.223 -2.485 -4.057 5.251 hybrid contribution -0.463 0.056 -0.094 0.476 sum 1.759 -2.429 -4.152 5.122 Atomic orbital electron populations 1.23301 0.75977 1.03943 1.02692 1.86512 1.23777 1.33570 1.84030 1.23918 0.92417 0.81344 0.72238 1.90690 1.67355 1.36360 1.45058 1.21441 0.87211 1.00402 1.06004 1.21434 0.94455 0.93669 1.04124 1.22633 0.94735 0.97617 0.97997 0.88939 1.23368 0.97555 0.97178 0.99752 1.21833 0.83530 0.96777 0.96603 0.87773 1.45545 1.07590 1.60451 1.22400 1.18316 0.83594 0.79058 0.84994 1.90838 1.86211 1.44346 1.20529 1.22875 0.92863 1.05897 1.02009 1.22409 0.90407 0.91855 0.98581 1.19055 0.93442 1.00014 0.94873 1.21298 0.98247 0.96906 0.94710 1.20834 0.92625 1.01116 0.99716 1.19530 0.93300 0.98024 0.95407 1.24727 0.96368 0.92116 1.05343 1.86497 1.48215 1.47070 1.53342 0.95234 0.87451 0.82466 0.76374 1.20991 0.98989 0.96683 0.94297 1.21476 0.91512 0.98045 0.99760 1.23543 0.98274 1.00110 0.96802 0.91765 0.91787 0.87903 0.87611 0.87530 0.90546 0.90625 0.88344 0.90657 0.76389 0.85279 0.84290 0.85086 0.86109 0.90575 0.76883 1.17499 1.17917 0.84962 0.84769 0.90894 0.88821 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.56 10.57 -39.27 -0.41 -0.98 16 3 C 0.46 0.79 7.96 36.00 0.29 1.07 16 4 O -0.51 -2.42 15.73 -18.74 -0.29 -2.71 16 5 C -0.11 0.19 5.80 -27.88 -0.16 0.03 16 6 C -0.10 0.15 4.34 -26.73 -0.12 0.03 16 7 C -0.11 0.29 3.53 -89.81 -0.32 -0.03 16 8 H 0.09 -0.34 8.13 -51.93 -0.42 -0.76 16 9 C -0.14 0.29 7.39 -25.92 -0.19 0.10 16 10 C 0.12 -0.04 4.32 -67.11 -0.29 -0.33 16 11 H 0.10 0.18 7.46 -51.93 -0.39 -0.21 16 12 N -0.71 0.40 5.26 -54.40 -0.29 0.11 16 13 C 0.55 1.24 7.74 -12.96 -0.10 1.14 16 14 O -0.54 -3.42 15.83 5.19 0.08 -3.34 16 15 C -0.22 -0.06 9.41 -37.50 -0.35 -0.41 16 16 C -0.01 -0.01 9.46 -37.15 -0.35 -0.36 16 17 C -0.07 -0.09 5.87 -105.06 -0.62 -0.70 16 18 C -0.09 -0.08 9.41 -39.11 -0.37 -0.45 16 19 C -0.13 -0.21 8.65 -39.65 -0.34 -0.55 16 20 C -0.06 -0.11 5.39 -104.50 -0.56 -0.67 16 21 C -0.07 0.04 2.79 36.00 0.10 0.14 16 22 O -0.54 0.12 12.81 -35.23 -0.45 -0.33 16 23 Si 0.68 -1.07 29.84 -169.99 -5.07 -6.15 16 24 C -0.09 -0.12 9.66 -39.65 -0.38 -0.50 16 25 C -0.09 -0.08 9.80 -39.11 -0.38 -0.47 16 26 C -0.15 0.19 7.43 -25.92 -0.19 0.00 16 27 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 31 H 0.11 -0.30 8.14 -51.92 -0.42 -0.72 16 32 H 0.08 -0.03 7.80 -51.93 -0.41 -0.44 16 33 H 0.08 -0.05 8.10 -51.92 -0.42 -0.47 16 34 H 0.10 -0.20 8.10 -51.93 -0.42 -0.62 16 35 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 36 H 0.40 -1.32 8.68 -40.82 -0.35 -1.67 16 37 H 0.13 -0.30 6.07 -52.49 -0.32 -0.62 16 38 H 0.14 0.20 7.52 -52.49 -0.39 -0.20 16 39 H 0.13 -0.20 6.17 -52.48 -0.32 -0.52 16 40 H 0.12 0.12 4.84 -52.48 -0.25 -0.14 16 41 H 0.08 -0.17 7.96 -51.93 -0.41 -0.58 16 42 H 0.38 -2.02 8.74 45.56 0.40 -1.62 16 43 H -0.25 -0.38 7.04 56.52 0.40 0.02 16 44 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 45 H 0.13 0.00 8.06 -52.49 -0.42 -0.43 16 46 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 47 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 48 H 0.09 -0.12 7.89 -51.93 -0.41 -0.53 16 LS Contribution 404.25 15.07 6.09 6.09 Total: 0.00 -10.72 404.25 -10.75 -21.47 By element: Atomic # 1 Polarization: -6.15 SS G_CDS: -7.13 Total: -13.28 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: -3.28 Total: -0.90 kcal Atomic # 7 Polarization: 0.40 SS G_CDS: -0.29 Total: 0.11 kcal Atomic # 8 Polarization: -6.27 SS G_CDS: -1.08 Total: -7.35 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.07 Total: -6.15 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -10.72 -10.75 -21.47 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.151 kcal (2) G-P(sol) polarization free energy of solvation -10.718 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -78.869 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.623 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds