Wall clock time and date at job start Tue Mar 9 2021 13:40:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34221 * 117.00247 * 2 1 4 4 O 1.20823 * 119.99936 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00074 * 180.02562 * 3 2 1 6 6 C 1.53008 * 109.47178 * 179.97438 * 5 3 2 7 7 C 1.52996 * 109.47000 * 179.97438 * 6 5 3 8 8 H 1.09006 * 112.90484 * 43.75696 * 7 6 5 9 9 C 1.53786 * 113.61346 * 175.00325 * 7 6 5 10 10 C 1.53773 * 87.08335 * 139.98483 * 9 7 6 11 11 H 1.08999 * 113.61740 * 219.93952 * 10 9 7 12 12 N 1.46505 * 113.61666 * 89.11551 * 10 9 7 13 13 C 1.34773 * 119.99956 * 155.00118 * 12 10 9 14 14 O 1.21591 * 120.00096 * 0.02562 * 13 12 10 15 15 C 1.47542 * 119.99544 * 180.02562 * 13 12 10 16 16 C 1.40141 * 120.18475 * 179.97438 * 15 13 12 17 17 O 1.35647 * 120.15399 * 0.04076 * 16 15 13 18 18 C 1.42903 * 116.99890 * 180.02562 * 17 16 15 19 19 C 1.38717 * 119.69483 * 180.02562 * 16 15 13 20 20 C 1.38053 * 120.08302 * 359.74396 * 19 16 15 21 21 C 1.38551 * 120.39050 * 0.50875 * 20 19 16 22 22 C 1.50701 * 119.84948 * 179.76257 * 21 20 19 23 23 O 1.42896 * 109.47417 * 244.72900 * 22 21 20 24 24 Si 1.86301 * 109.47149 * 4.72916 * 22 21 20 25 25 C 1.37786 * 120.30127 * 359.49316 * 21 20 19 26 26 C 1.53776 * 113.62121 * 272.49969 * 7 6 5 27 27 H 1.08996 * 109.47162 * 299.99943 * 1 2 3 28 28 H 1.09000 * 109.47064 * 60.00119 * 1 2 3 29 29 H 1.08995 * 109.47173 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.46986 * 60.00334 * 5 3 2 31 31 H 1.08992 * 109.46973 * 299.99884 * 5 3 2 32 32 H 1.09009 * 109.46728 * 60.00252 * 6 5 3 33 33 H 1.08991 * 109.47458 * 300.00430 * 6 5 3 34 34 H 1.09004 * 113.61259 * 25.43553 * 9 7 6 35 35 H 1.09003 * 113.69100 * 254.54313 * 9 7 6 36 36 H 0.96999 * 119.99836 * 334.99937 * 12 10 9 37 37 H 1.09001 * 109.47180 * 60.00137 * 18 17 16 38 38 H 1.09001 * 109.47129 * 180.02562 * 18 17 16 39 39 H 1.09005 * 109.47149 * 299.99776 * 18 17 16 40 40 H 1.07993 * 119.95426 * 179.97438 * 19 16 15 41 41 H 1.07999 * 119.80590 * 180.27762 * 20 19 16 42 42 H 1.09002 * 109.47060 * 124.72927 * 22 21 20 43 43 H 0.96708 * 114.00101 * 59.99427 * 23 22 21 44 44 H 1.48493 * 110.00101 * 179.97438 * 24 22 21 45 45 H 1.48502 * 109.99925 * 301.31801 * 24 22 21 46 46 H 1.08000 * 120.04693 * 180.27683 * 25 21 20 47 47 H 1.09002 * 113.61714 * 105.46495 * 26 7 6 48 48 H 1.09006 * 113.61193 * 334.57476 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5663 1.2747 -0.0006 6 6 4.0002 2.7420 -0.0011 7 6 5.5281 2.8220 -0.0011 8 1 5.9897 2.1196 -0.6952 9 6 6.0699 4.2559 -0.1243 10 6 7.1385 3.8569 0.9069 11 1 7.3512 4.6358 1.6392 12 7 8.3508 3.2931 0.3077 13 6 9.5240 3.3639 0.9671 14 8 9.5764 3.8952 2.0596 15 6 10.7449 2.7967 0.3634 16 6 11.9671 2.8686 1.0453 17 8 12.0333 3.4595 2.2645 18 6 13.3132 3.4959 2.8991 19 6 13.1087 2.3324 0.4679 20 6 13.0386 1.7263 -0.7705 21 6 11.8332 1.6579 -1.4501 22 6 11.7716 0.9983 -2.8037 23 8 11.4280 1.9710 -3.7924 24 14 13.4327 0.2593 -3.2105 25 6 10.6893 2.1853 -0.8916 26 6 6.1466 2.7933 1.4066 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 3.9557 0.7808 -0.8909 31 1 3.9564 0.7805 0.8891 32 1 3.6108 3.2363 0.8890 33 1 3.6102 3.2359 -0.8909 34 1 5.3776 5.0167 0.2364 35 1 6.4776 4.4870 -1.1084 36 1 8.3089 2.8689 -0.5636 37 1 14.0153 4.0430 2.2699 38 1 13.2260 3.9938 3.8648 39 1 13.6746 2.4782 3.0469 40 1 14.0528 2.3858 0.9896 41 1 13.9294 1.3064 -1.2138 42 1 11.0173 0.2115 -2.7905 43 1 12.0569 2.7026 -3.8598 44 1 13.3851 -0.3948 -4.5427 45 1 14.4753 1.3168 -3.2004 46 1 9.7510 2.1257 -1.4230 47 1 6.6159 1.8422 1.6581 48 1 5.4752 3.1542 2.1859 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17523010_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:45 Heat of formation + Delta-G solvation = -135.564031 kcal Electronic energy + Delta-G solvation = -30546.786638 eV Core-core repulsion = 26148.905374 eV Total energy + Delta-G solvation = -4397.881264 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -41.84352 -41.43369 -40.77843 -39.26594 -39.10055 -37.50269 -37.27098 -35.02751 -33.53134 -32.28920 -31.85135 -29.13107 -28.60946 -27.03352 -26.67329 -26.24956 -25.23177 -23.46408 -22.60107 -21.64147 -21.43797 -20.27577 -19.46952 -18.55398 -18.45856 -18.13133 -17.61747 -17.46949 -17.24048 -16.85985 -16.77704 -16.26287 -16.11154 -15.94559 -15.81230 -15.74737 -15.15331 -15.09339 -14.67736 -14.59203 -14.40893 -14.29448 -14.06761 -13.63850 -13.57140 -13.45523 -13.33469 -13.19574 -13.02930 -12.68011 -12.47223 -12.27473 -12.19996 -12.11517 -11.94463 -11.74584 -11.72628 -11.55957 -11.29245 -11.10849 -10.91361 -10.55335 -10.24615 -9.94393 -9.31111 -5.05123 -0.26990 0.16808 1.18978 1.26091 1.49562 1.76870 1.85095 1.88763 2.12362 2.20487 2.70416 3.26794 3.44207 3.45626 3.49523 3.56927 3.62747 3.69568 3.79916 3.84563 3.94439 4.04636 4.09715 4.17382 4.18549 4.18733 4.21006 4.27127 4.31716 4.40874 4.47572 4.48694 4.55739 4.61582 4.63621 4.71560 4.74622 4.83253 4.83437 4.88910 4.99044 5.03761 5.09076 5.17691 5.20967 5.27370 5.45975 5.47350 5.66447 6.27021 6.30994 6.56831 6.79139 7.35443 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.507 6.507 5 C -0.113 4.113 6 C -0.099 4.099 7 C -0.112 4.112 8 H 0.092 0.908 9 C -0.141 4.141 10 C 0.121 3.879 11 H 0.104 0.896 12 N -0.713 5.713 13 C 0.564 3.436 14 O -0.514 6.514 15 C -0.175 4.175 16 C 0.194 3.806 17 O -0.279 6.279 18 C 0.019 3.981 19 C -0.214 4.214 20 C -0.048 4.048 21 C -0.167 4.167 22 C -0.068 4.068 23 O -0.530 6.530 24 Si 0.683 3.317 25 C -0.019 4.019 26 C -0.149 4.149 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.106 0.894 31 H 0.107 0.893 32 H 0.076 0.924 33 H 0.075 0.925 34 H 0.098 0.902 35 H 0.075 0.925 36 H 0.398 0.602 37 H 0.058 0.942 38 H 0.105 0.895 39 H 0.059 0.941 40 H 0.141 0.859 41 H 0.134 0.866 42 H 0.119 0.881 43 H 0.377 0.623 44 H -0.256 1.256 45 H -0.260 1.260 46 H 0.135 0.865 47 H 0.073 0.927 48 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.286 -4.256 -0.910 5.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.395 6.395 5 C -0.151 4.151 6 C -0.137 4.137 7 C -0.130 4.130 8 H 0.110 0.890 9 C -0.179 4.179 10 C 0.016 3.984 11 H 0.122 0.878 12 N -0.366 5.366 13 C 0.351 3.649 14 O -0.389 6.389 15 C -0.179 4.179 16 C 0.145 3.855 17 O -0.189 6.189 18 C -0.076 4.076 19 C -0.233 4.233 20 C -0.066 4.066 21 C -0.167 4.167 22 C -0.178 4.178 23 O -0.336 6.336 24 Si 0.585 3.415 25 C -0.038 4.038 26 C -0.187 4.187 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.124 0.876 31 H 0.125 0.875 32 H 0.094 0.906 33 H 0.094 0.906 34 H 0.116 0.884 35 H 0.093 0.907 36 H 0.234 0.766 37 H 0.076 0.924 38 H 0.124 0.876 39 H 0.078 0.922 40 H 0.159 0.841 41 H 0.152 0.848 42 H 0.137 0.863 43 H 0.224 0.776 44 H -0.181 1.181 45 H -0.185 1.185 46 H 0.152 0.848 47 H 0.091 0.909 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 3.115 -3.867 -0.601 5.002 hybrid contribution -0.129 0.814 -0.837 1.175 sum 2.986 -3.053 -1.438 4.507 Atomic orbital electron populations 1.23296 0.76017 1.03917 1.02676 1.86510 1.23739 1.33586 1.84032 1.23929 0.92434 0.81333 0.72221 1.90691 1.67365 1.36363 1.45076 1.21444 0.87161 1.00430 1.06018 1.21432 0.94483 0.93643 1.04096 1.22634 0.94684 0.97634 0.98040 0.88951 1.23374 0.97572 0.97163 0.99797 1.21799 0.83386 0.96722 0.96532 0.87759 1.45567 1.07493 1.61013 1.22514 1.17940 0.82665 0.79264 0.84997 1.90849 1.85505 1.42880 1.19685 1.19328 0.92386 1.09229 0.96918 1.19100 0.92523 0.89127 0.84773 1.86384 1.32480 1.72026 1.28024 1.23242 0.83705 1.02215 0.98483 1.21234 0.98174 1.05596 0.98260 1.21041 0.97105 0.94780 0.93694 1.20054 0.93616 1.04806 0.98268 1.24932 1.13069 0.94426 0.85421 1.86603 1.52291 1.37145 1.57603 0.95024 0.74900 0.85718 0.85908 1.20965 0.98504 0.92532 0.91784 1.23546 0.98269 1.00165 0.96743 0.91784 0.91802 0.87928 0.87595 0.87505 0.90563 0.90648 0.88356 0.90668 0.76610 0.92357 0.87641 0.92221 0.84146 0.84843 0.86295 0.77559 1.18078 1.18495 0.84753 0.90866 0.88854 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.56 10.56 -39.23 -0.41 -0.98 16 3 C 0.46 0.81 7.96 36.01 0.29 1.10 16 4 O -0.51 -2.46 15.73 -18.75 -0.29 -2.76 16 5 C -0.11 0.18 5.80 -27.88 -0.16 0.02 16 6 C -0.10 0.13 4.34 -26.73 -0.12 0.02 16 7 C -0.11 0.26 3.53 -89.81 -0.32 -0.05 16 8 H 0.09 -0.31 8.13 -51.93 -0.42 -0.73 16 9 C -0.14 0.24 7.39 -25.92 -0.19 0.05 16 10 C 0.12 0.01 4.32 -67.12 -0.29 -0.28 16 11 H 0.10 0.22 7.46 -51.93 -0.39 -0.17 16 12 N -0.71 -0.13 5.21 -54.06 -0.28 -0.41 16 13 C 0.56 1.92 7.76 -12.47 -0.10 1.82 16 14 O -0.51 -3.77 14.76 -16.59 -0.24 -4.02 16 15 C -0.17 -0.33 5.89 -104.84 -0.62 -0.94 16 16 C 0.19 0.40 6.70 -38.69 -0.26 0.14 16 17 O -0.28 -0.93 8.57 -40.52 -0.35 -1.27 16 18 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 19 C -0.21 0.12 9.03 -39.47 -0.36 -0.24 16 20 C -0.05 0.07 8.65 -39.53 -0.34 -0.27 16 21 C -0.17 0.21 5.35 -104.67 -0.56 -0.35 16 22 C -0.07 0.13 2.79 36.01 0.10 0.23 16 23 O -0.53 0.21 12.83 -35.23 -0.45 -0.24 16 24 Si 0.68 -1.52 29.86 -169.99 -5.08 -6.59 16 25 C -0.02 0.01 9.16 -39.20 -0.36 -0.35 16 26 C -0.15 0.16 7.43 -25.92 -0.19 -0.03 16 27 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 30 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.08 -0.02 7.80 -51.92 -0.41 -0.43 16 33 H 0.07 -0.03 8.10 -51.93 -0.42 -0.45 16 34 H 0.10 -0.17 8.10 -51.93 -0.42 -0.59 16 35 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 36 H 0.40 -0.90 6.73 -40.82 -0.27 -1.17 16 37 H 0.06 -0.14 7.66 -51.93 -0.40 -0.54 16 38 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 39 H 0.06 -0.16 7.66 -51.93 -0.40 -0.55 16 40 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 41 H 0.13 -0.46 4.81 -52.49 -0.25 -0.71 16 42 H 0.12 -0.33 7.96 -51.93 -0.41 -0.75 16 43 H 0.38 -1.09 8.70 45.56 0.40 -0.69 16 44 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 45 H -0.26 0.09 7.01 56.52 0.40 0.49 16 46 H 0.13 -0.34 6.40 -52.49 -0.34 -0.67 16 47 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 48 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 LS Contribution 396.95 15.07 5.98 5.98 Total: 0.00 -10.65 396.95 -9.60 -20.25 By element: Atomic # 1 Polarization: -5.78 SS G_CDS: -7.06 Total: -12.84 kcal Atomic # 6 Polarization: 4.30 SS G_CDS: -1.41 Total: 2.89 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.28 Total: -0.41 kcal Atomic # 8 Polarization: -7.52 SS G_CDS: -1.75 Total: -9.27 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.08 Total: -6.59 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -10.65 -9.60 -20.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.316 kcal (2) G-P(sol) polarization free energy of solvation -10.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -125.964 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.600 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.248 kcal (6) G-S(sol) free energy of system = (1) + (5) -135.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds