Wall clock time and date at job start Tue Mar 9 2021 13:41:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34230 * 117.00195 * 2 1 4 4 O 1.20825 * 119.99391 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00234 * 179.97438 * 3 2 1 6 6 C 1.53002 * 109.47020 * 179.97438 * 5 3 2 7 7 C 1.52994 * 109.47225 * 179.97438 * 6 5 3 8 8 H 1.09002 * 112.84929 * 316.20161 * 7 6 5 9 9 C 1.53962 * 113.66220 * 87.44285 * 7 6 5 10 10 C 1.53786 * 87.01719 * 139.93548 * 9 7 6 11 11 H 1.09002 * 113.61357 * 220.04719 * 10 9 7 12 12 N 1.46497 * 113.61643 * 89.22773 * 10 9 7 13 13 C 1.34780 * 119.99653 * 105.85894 * 12 10 9 14 14 O 1.21586 * 120.00407 * 0.02562 * 13 12 10 15 15 C 1.47545 * 119.99604 * 179.97438 * 13 12 10 16 16 C 1.40133 * 120.18800 * 179.72237 * 15 13 12 17 17 O 1.35657 * 120.15100 * 0.02562 * 16 15 13 18 18 C 1.38713 * 119.69872 * 179.77093 * 16 15 13 19 19 C 1.38048 * 120.08088 * 0.51402 * 18 16 15 20 20 C 1.50702 * 119.80543 * 179.72110 * 19 18 16 21 21 O 1.42899 * 109.47226 * 65.01940 * 20 19 18 22 22 Si 1.86300 * 109.47319 * 185.02194 * 20 19 18 23 23 C 1.38551 * 120.39504 * 359.74033 * 19 18 16 24 24 C 1.37786 * 120.29645 * 0.02562 * 23 19 18 25 25 C 1.53781 * 87.17350 * 334.63802 * 10 9 7 26 26 H 1.09003 * 109.46992 * 180.02562 * 1 2 3 27 27 H 1.08997 * 109.47352 * 299.99819 * 1 2 3 28 28 H 1.08996 * 109.47102 * 60.00235 * 1 2 3 29 29 H 1.08993 * 109.47112 * 60.00276 * 5 3 2 30 30 H 1.08993 * 109.47019 * 300.00215 * 5 3 2 31 31 H 1.09005 * 109.46667 * 60.00486 * 6 5 3 32 32 H 1.08998 * 109.47226 * 300.00423 * 6 5 3 33 33 H 1.08993 * 113.61598 * 25.41530 * 9 7 6 34 34 H 1.09000 * 113.66569 * 254.45886 * 9 7 6 35 35 H 0.96995 * 120.00146 * 285.86755 * 12 10 9 36 36 H 0.96694 * 114.00479 * 89.99986 * 17 16 15 37 37 H 1.07994 * 119.95927 * 180.23481 * 18 16 15 38 38 H 1.09007 * 109.47241 * 305.02018 * 20 19 18 39 39 H 0.96701 * 113.99713 * 60.00238 * 21 20 19 40 40 H 1.48498 * 110.00129 * 58.68107 * 22 20 19 41 41 H 1.48502 * 109.99984 * 180.02562 * 22 20 19 42 42 H 1.07993 * 119.85311 * 180.02562 * 23 19 18 43 43 H 1.08003 * 120.04525 * 179.97438 * 24 23 19 44 44 H 1.09001 * 113.61695 * 139.93969 * 25 10 9 45 45 H 1.08997 * 113.61223 * 270.84552 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7421 -0.0002 7 6 5.5280 2.8222 0.0011 8 1 5.9880 2.1209 0.6972 9 6 6.1495 2.7907 -1.4072 10 6 7.1391 3.8562 -0.9068 11 1 7.3513 4.6339 -1.6405 12 7 8.3516 3.2950 -0.3059 13 6 9.5189 3.3381 -0.9783 14 8 9.5658 3.8431 -2.0833 15 6 10.7402 2.7734 -0.3728 16 6 11.9548 2.8108 -1.0708 17 8 12.0136 3.3671 -2.3066 18 6 13.0977 2.2812 -0.4900 19 6 13.0351 1.7107 0.7655 20 6 14.2794 1.1315 1.3880 21 8 15.2231 2.1774 1.6279 22 14 13.8415 0.3082 3.0008 23 6 11.8350 1.6669 1.4566 24 6 10.6910 2.1925 0.8968 25 6 6.0696 4.2563 0.1232 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 3.9564 0.7806 -0.8891 30 1 3.9557 0.7809 0.8908 31 1 3.6100 3.2367 0.8894 32 1 3.6107 3.2356 -0.8906 33 1 5.4795 3.1496 -2.1883 34 1 6.6208 1.8399 -1.6562 35 1 8.3143 2.8924 0.5757 36 1 12.2144 4.3130 -2.3031 37 1 14.0367 2.3113 -1.0225 38 1 14.7157 0.3964 0.7116 39 1 14.9015 2.8684 2.2229 40 1 12.8367 -0.7604 2.7693 41 1 15.0602 -0.2665 3.6250 42 1 11.7961 1.2189 2.4384 43 1 9.7576 2.1559 1.4389 44 1 6.4763 4.4870 1.1079 45 1 5.3776 5.0167 -0.2388 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17523010_13422076.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:59 Heat of formation + Delta-G solvation = -143.389591 kcal Electronic energy + Delta-G solvation = -28160.887861 eV Core-core repulsion = 23918.204874 eV Total energy + Delta-G solvation = -4242.682987 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -41.82033 -41.44034 -40.70200 -39.24635 -38.35191 -37.53451 -37.18856 -35.10852 -33.63310 -32.36592 -31.15403 -29.17858 -27.76280 -26.90477 -26.62483 -23.99012 -23.97858 -23.08326 -21.81495 -21.57330 -20.36735 -19.41333 -18.76886 -18.52950 -18.23335 -17.65593 -17.51407 -17.31068 -16.80041 -16.54319 -16.32465 -15.99707 -15.87779 -15.74610 -15.32763 -15.17869 -14.99404 -14.82212 -14.41536 -14.30795 -14.09826 -13.87905 -13.58323 -13.47058 -13.27769 -13.08530 -12.98722 -12.73727 -12.34947 -12.26774 -12.19872 -12.01508 -11.77877 -11.71960 -11.61485 -11.35847 -11.18342 -10.85025 -10.56845 -10.20714 -10.05218 -9.82793 -5.16076 -0.44865 0.05872 1.13748 1.22223 1.51729 1.72684 1.73853 1.87104 1.99929 2.54415 3.05895 3.33024 3.35366 3.37757 3.41503 3.56311 3.64109 3.67149 3.74355 3.78521 3.93883 4.03775 4.13336 4.15828 4.17142 4.24205 4.28421 4.34736 4.42892 4.51398 4.59900 4.63737 4.64929 4.67524 4.75556 4.77665 4.90727 4.92497 4.99584 5.06487 5.12344 5.15579 5.20191 5.42235 5.48349 5.56066 6.41930 6.42177 6.68347 6.75334 7.19801 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.507 6.507 5 C -0.113 4.113 6 C -0.099 4.099 7 C -0.112 4.112 8 H 0.092 0.908 9 C -0.149 4.149 10 C 0.120 3.880 11 H 0.104 0.896 12 N -0.711 5.711 13 C 0.561 3.439 14 O -0.515 6.515 15 C -0.164 4.164 16 C 0.174 3.826 17 O -0.476 6.476 18 C -0.129 4.129 19 C -0.076 4.076 20 C -0.074 4.074 21 O -0.536 6.536 22 Si 0.691 3.309 23 C -0.135 4.135 24 C -0.065 4.065 25 C -0.139 4.139 26 H 0.102 0.898 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.106 0.894 30 H 0.106 0.894 31 H 0.075 0.925 32 H 0.076 0.924 33 H 0.094 0.906 34 H 0.072 0.928 35 H 0.399 0.601 36 H 0.399 0.601 37 H 0.140 0.860 38 H 0.118 0.882 39 H 0.380 0.620 40 H -0.255 1.255 41 H -0.253 1.253 42 H 0.136 0.864 43 H 0.134 0.866 44 H 0.075 0.925 45 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.875 -0.478 6.113 6.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.395 6.395 5 C -0.151 4.151 6 C -0.137 4.137 7 C -0.130 4.130 8 H 0.110 0.890 9 C -0.188 4.188 10 C 0.015 3.985 11 H 0.122 0.878 12 N -0.364 5.364 13 C 0.348 3.652 14 O -0.391 6.391 15 C -0.168 4.168 16 C 0.127 3.873 17 O -0.288 6.288 18 C -0.148 4.148 19 C -0.077 4.077 20 C -0.185 4.185 21 O -0.342 6.342 22 Si 0.592 3.408 23 C -0.152 4.152 24 C -0.084 4.084 25 C -0.177 4.177 26 H 0.121 0.879 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.125 0.875 30 H 0.124 0.876 31 H 0.094 0.906 32 H 0.095 0.905 33 H 0.112 0.888 34 H 0.091 0.909 35 H 0.235 0.765 36 H 0.257 0.743 37 H 0.158 0.842 38 H 0.135 0.865 39 H 0.228 0.772 40 H -0.180 1.180 41 H -0.178 1.178 42 H 0.153 0.847 43 H 0.152 0.848 44 H 0.094 0.906 45 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -0.855 -1.474 5.151 5.426 hybrid contribution -0.172 0.117 -0.093 0.228 sum -1.027 -1.357 5.059 5.337 Atomic orbital electron populations 1.23300 0.75973 1.03941 1.02692 1.86511 1.23775 1.33572 1.84021 1.23920 0.92420 0.81345 0.72238 1.90693 1.67354 1.36362 1.45067 1.21440 0.87213 1.00408 1.06010 1.21431 0.94432 0.93671 1.04140 1.22670 0.94747 0.97584 0.97998 0.88966 1.23579 0.98261 1.00142 0.96804 1.21826 0.83362 0.96763 0.96581 0.87779 1.45582 1.07898 1.61731 1.21164 1.18039 0.82810 0.79160 0.85150 1.90841 1.85501 1.43825 1.18927 1.20415 0.94517 1.05913 0.95972 1.18516 0.90635 0.94121 0.84021 1.84761 1.93199 1.28306 1.22513 1.21356 0.98401 1.00139 0.94858 1.20448 0.95431 0.97195 0.94605 1.25194 0.89448 0.94812 1.09043 1.86543 1.40369 1.36520 1.70736 0.94780 0.81360 0.84166 0.80500 1.20924 0.92236 1.01875 1.00166 1.21141 0.98670 0.95270 0.93290 1.23362 0.97485 0.97206 0.99697 0.87914 0.91781 0.91768 0.87535 0.87601 0.90601 0.90535 0.88792 0.90880 0.76549 0.74272 0.84197 0.86473 0.77238 1.18020 1.17750 0.84656 0.84835 0.90604 0.88266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.45 10.57 -39.26 -0.41 -0.87 16 3 C 0.46 0.63 7.96 36.01 0.29 0.91 16 4 O -0.51 -2.24 15.73 -18.75 -0.29 -2.53 16 5 C -0.11 0.24 5.80 -27.88 -0.16 0.08 16 6 C -0.10 0.20 4.34 -26.73 -0.12 0.08 16 7 C -0.11 0.36 3.54 -89.71 -0.32 0.04 16 8 H 0.09 -0.40 8.13 -51.93 -0.42 -0.82 16 9 C -0.15 0.26 7.45 -25.82 -0.19 0.06 16 10 C 0.12 -0.13 4.30 -67.12 -0.29 -0.42 16 11 H 0.10 0.10 7.50 -51.93 -0.39 -0.29 16 12 N -0.71 0.88 5.22 -54.05 -0.28 0.59 16 13 C 0.56 1.10 7.76 -12.46 -0.10 1.00 16 14 O -0.52 -3.00 14.78 -16.59 -0.25 -3.25 16 15 C -0.16 -0.10 5.89 -104.84 -0.62 -0.71 16 16 C 0.17 0.27 6.72 -38.70 -0.26 0.01 16 17 O -0.48 -1.24 11.58 -40.55 -0.47 -1.71 16 18 C -0.13 -0.04 9.60 -39.48 -0.38 -0.42 16 19 C -0.08 0.09 5.35 -104.58 -0.56 -0.47 16 20 C -0.07 0.11 2.79 36.01 0.10 0.21 16 21 O -0.54 0.55 12.83 -35.23 -0.45 0.10 16 22 Si 0.69 -1.75 29.78 -169.99 -5.06 -6.81 16 23 C -0.13 0.34 8.64 -39.63 -0.34 0.00 16 24 C -0.06 0.15 9.54 -39.20 -0.37 -0.22 16 25 C -0.14 0.41 7.38 -25.92 -0.19 0.22 16 26 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.11 -0.33 8.14 -51.93 -0.42 -0.76 16 30 H 0.11 -0.40 8.14 -51.93 -0.42 -0.83 16 31 H 0.08 -0.09 8.10 -51.93 -0.42 -0.51 16 32 H 0.08 -0.07 7.81 -51.93 -0.41 -0.47 16 33 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 34 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 35 H 0.40 -1.61 6.74 -40.82 -0.27 -1.88 16 36 H 0.40 -0.46 9.06 45.56 0.41 -0.05 16 37 H 0.14 0.02 8.06 -52.49 -0.42 -0.40 16 38 H 0.12 -0.11 7.96 -51.92 -0.41 -0.52 16 39 H 0.38 -1.93 8.70 45.56 0.40 -1.53 16 40 H -0.26 0.07 7.11 56.52 0.40 0.47 16 41 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 42 H 0.14 -0.66 4.88 -52.49 -0.26 -0.91 16 43 H 0.13 -0.72 6.40 -52.48 -0.34 -1.06 16 44 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 45 H 0.10 -0.28 8.10 -51.93 -0.42 -0.70 16 LS Contribution 378.62 15.07 5.71 5.71 Total: 0.00 -11.36 378.62 -9.48 -20.84 By element: Atomic # 1 Polarization: -7.98 SS G_CDS: -5.52 Total: -13.50 kcal Atomic # 6 Polarization: 3.87 SS G_CDS: -2.44 Total: 1.42 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.28 Total: 0.59 kcal Atomic # 8 Polarization: -6.38 SS G_CDS: -1.88 Total: -8.25 kcal Atomic # 14 Polarization: -1.75 SS G_CDS: -5.06 Total: -6.81 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -11.36 -9.48 -20.84 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_13422076.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.550 kcal (2) G-P(sol) polarization free energy of solvation -11.363 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.913 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -143.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds