Wall clock time and date at job start Tue Mar 9 2021 13:43:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34227 * 116.99760 * 2 1 4 4 O 1.20826 * 120.00103 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99899 * 179.97438 * 3 2 1 6 6 C 1.52999 * 109.47367 * 180.02562 * 5 3 2 7 7 C 1.52997 * 109.47336 * 179.97438 * 6 5 3 8 8 H 1.09000 * 112.84933 * 316.19893 * 7 6 5 9 9 C 1.53787 * 113.68803 * 87.46569 * 7 6 5 10 10 C 1.53783 * 87.08072 * 139.99568 * 9 7 6 11 11 H 1.08998 * 113.68821 * 220.01195 * 10 9 7 12 12 N 1.46496 * 113.61724 * 89.11203 * 10 9 7 13 13 C 1.34774 * 119.99544 * 107.50420 * 12 10 9 14 14 O 1.21279 * 120.00472 * 0.02562 * 13 12 10 15 15 C 1.50706 * 120.00020 * 180.02562 * 13 12 10 16 16 O 1.42895 * 109.47147 * 180.02562 * 15 13 12 17 17 C 1.35982 * 117.00105 * 179.97438 * 16 15 13 18 18 C 1.38674 * 120.00234 * 179.97438 * 17 16 15 19 19 C 1.50693 * 120.00262 * 0.02562 * 18 17 16 20 20 O 1.42903 * 109.47306 * 285.00267 * 19 18 17 21 21 Si 1.86296 * 109.47397 * 165.00335 * 19 18 17 22 22 C 1.38153 * 120.00103 * 180.02562 * 18 17 16 23 23 C 1.38684 * 119.99794 * 359.97438 * 22 18 17 24 24 O 1.35981 * 119.99935 * 179.97438 * 23 22 18 25 25 C 1.42899 * 117.00130 * 180.02562 * 24 23 22 26 26 C 1.38715 * 119.99886 * 0.02562 * 23 22 18 27 27 C 1.38109 * 120.00081 * 359.72022 * 26 23 22 28 28 C 1.53776 * 113.61769 * 185.00018 * 7 6 5 29 29 H 1.09004 * 109.46807 * 60.00234 * 1 2 3 30 30 H 1.09000 * 109.46857 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47383 * 300.00152 * 1 2 3 32 32 H 1.09000 * 109.47036 * 60.00076 * 5 3 2 33 33 H 1.08999 * 109.47051 * 300.00539 * 5 3 2 34 34 H 1.09003 * 109.46608 * 59.99930 * 6 5 3 35 35 H 1.08994 * 109.46989 * 300.00500 * 6 5 3 36 36 H 1.08998 * 113.61140 * 25.44539 * 9 7 6 37 37 H 1.09002 * 113.61226 * 254.54260 * 9 7 6 38 38 H 0.96994 * 120.00700 * 287.50539 * 12 10 9 39 39 H 1.09001 * 109.46953 * 299.99667 * 15 13 12 40 40 H 1.09000 * 109.47318 * 59.99264 * 15 13 12 41 41 H 1.09005 * 109.46999 * 45.00238 * 19 18 17 42 42 H 0.96703 * 113.99486 * 59.99724 * 20 19 18 43 43 H 1.48499 * 109.99920 * 178.68524 * 21 19 18 44 44 H 1.48506 * 109.99680 * 300.00126 * 21 19 18 45 45 H 1.07994 * 120.00711 * 179.97438 * 22 18 17 46 46 H 1.09003 * 109.47022 * 300.00080 * 25 24 23 47 47 H 1.09005 * 109.47153 * 59.99778 * 25 24 23 48 48 H 1.08998 * 109.47290 * 179.97438 * 25 24 23 49 49 H 1.08009 * 119.99721 * 179.97438 * 26 23 22 50 50 H 1.08001 * 120.00093 * 180.29070 * 27 26 23 51 51 H 1.09004 * 113.61741 * 105.38374 * 28 7 6 52 52 H 1.09004 * 113.68739 * 334.49720 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0002 2.7421 0.0011 7 6 5.5280 2.8222 0.0023 8 1 5.9881 2.1203 0.6979 9 6 6.1494 2.7925 -1.4041 10 6 7.1405 3.8562 -0.9030 11 1 7.3547 4.6347 -1.6352 12 7 8.3513 3.2929 -0.3007 13 6 9.5260 3.3631 -0.9577 14 8 9.5808 3.8931 -2.0472 15 6 10.7716 2.7831 -0.3385 16 8 11.8784 2.9808 -1.2204 17 6 13.0870 2.5128 -0.8088 18 6 14.2033 2.6707 -1.6163 19 6 14.0772 3.3615 -2.9496 20 8 13.4467 2.4828 -3.8836 21 14 15.7714 3.8196 -3.5744 22 6 15.4310 2.1948 -1.1983 23 6 15.5472 1.5595 0.0290 24 8 16.7556 1.0906 0.4402 25 6 16.8019 0.4464 1.7149 26 6 14.4305 1.4015 0.8366 27 6 13.2042 1.8820 0.4211 28 6 6.0697 4.2561 0.1257 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 3.9564 0.7806 -0.8892 33 1 3.9557 0.7809 0.8908 34 1 3.6100 3.2359 0.8911 35 1 3.6107 3.2364 -0.8888 36 1 5.4798 3.1530 -2.1849 37 1 6.6192 1.8412 -1.6538 38 1 8.3077 2.8693 0.5707 39 1 10.9707 3.2802 0.6109 40 1 10.6291 1.7161 -0.1670 41 1 13.4756 4.2634 -2.8361 42 1 12.5588 2.2026 -3.6223 43 1 15.6631 4.4732 -4.9034 44 1 16.4377 4.7333 -2.6118 45 1 16.3004 2.3173 -1.8272 46 1 16.4808 1.1455 2.4871 47 1 16.1385 -0.4185 1.7093 48 1 17.8215 0.1205 1.9205 49 1 14.5209 0.9064 1.7923 50 1 12.3357 1.7632 1.0520 51 1 6.4751 4.4865 1.1110 52 1 5.3791 5.0178 -0.2364 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17523010_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:33 Heat of formation + Delta-G solvation = -173.702876 kcal Electronic energy + Delta-G solvation = -34061.309663 eV Core-core repulsion = 29187.554763 eV Total energy + Delta-G solvation = -4873.754899 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -41.90454 -41.57415 -41.23051 -40.22967 -39.36826 -37.97823 -37.56749 -36.83585 -35.22593 -33.47178 -32.78057 -31.10003 -29.71925 -29.00054 -28.10042 -27.01117 -26.72478 -26.49619 -24.06425 -23.28821 -22.40941 -21.99218 -21.59967 -20.46755 -19.54180 -18.84334 -18.60932 -18.47285 -17.89271 -17.69106 -17.58246 -17.53675 -17.42432 -17.04782 -16.70480 -16.15642 -16.03199 -15.80661 -15.66889 -15.37288 -15.25953 -15.18171 -14.89480 -14.44857 -14.39009 -14.18415 -14.13938 -13.96584 -13.66375 -13.62684 -13.53166 -13.43697 -13.13565 -13.08803 -12.81296 -12.65556 -12.32602 -12.26106 -12.08290 -11.86773 -11.80583 -11.67832 -11.53100 -11.41344 -11.25838 -11.16123 -11.02461 -10.92925 -10.24095 -10.07833 -8.82991 -4.74353 0.06808 0.34042 1.19111 1.32568 1.38219 1.53686 1.70122 1.78996 2.14626 2.24868 2.45782 2.55460 3.28732 3.31090 3.36219 3.53449 3.58531 3.62391 3.65906 3.69238 3.71940 3.81592 3.95442 3.98823 4.07585 4.08665 4.10902 4.11634 4.13666 4.16866 4.21886 4.29316 4.33159 4.37739 4.43105 4.52953 4.56012 4.58748 4.60576 4.63880 4.68518 4.71029 4.83302 4.92845 5.01699 5.02977 5.09961 5.13245 5.17781 5.37918 5.39602 5.44580 6.05100 6.25013 6.37636 6.72280 6.74264 7.00044 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.362 6.362 3 C 0.457 3.543 4 O -0.507 6.507 5 C -0.113 4.113 6 C -0.100 4.100 7 C -0.112 4.112 8 H 0.093 0.907 9 C -0.148 4.148 10 C 0.119 3.881 11 H 0.106 0.894 12 N -0.710 5.710 13 C 0.518 3.482 14 O -0.509 6.509 15 C 0.041 3.959 16 O -0.290 6.290 17 C 0.099 3.901 18 C -0.098 4.098 19 C -0.072 4.072 20 O -0.533 6.533 21 Si 0.743 3.257 22 C -0.103 4.103 23 C 0.104 3.896 24 O -0.314 6.314 25 C 0.026 3.974 26 C -0.165 4.165 27 C -0.165 4.165 28 C -0.140 4.140 29 H 0.064 0.936 30 H 0.103 0.897 31 H 0.064 0.936 32 H 0.107 0.893 33 H 0.106 0.894 34 H 0.075 0.925 35 H 0.076 0.924 36 H 0.095 0.905 37 H 0.073 0.927 38 H 0.402 0.598 39 H 0.094 0.906 40 H 0.095 0.905 41 H 0.078 0.922 42 H 0.368 0.632 43 H -0.254 1.254 44 H -0.251 1.251 45 H 0.147 0.853 46 H 0.055 0.945 47 H 0.056 0.944 48 H 0.103 0.897 49 H 0.135 0.865 50 H 0.133 0.867 51 H 0.075 0.925 52 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.634 -5.219 7.183 8.901 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.300 3.700 4 O -0.395 6.395 5 C -0.150 4.150 6 C -0.137 4.137 7 C -0.130 4.130 8 H 0.111 0.889 9 C -0.187 4.187 10 C 0.014 3.986 11 H 0.124 0.876 12 N -0.364 5.364 13 C 0.303 3.697 14 O -0.382 6.382 15 C -0.037 4.037 16 O -0.203 6.203 17 C 0.054 3.946 18 C -0.099 4.099 19 C -0.180 4.180 20 O -0.339 6.339 21 Si 0.641 3.359 22 C -0.121 4.121 23 C 0.058 3.942 24 O -0.227 6.227 25 C -0.069 4.069 26 C -0.184 4.184 27 C -0.184 4.184 28 C -0.178 4.178 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.082 0.918 32 H 0.125 0.875 33 H 0.124 0.876 34 H 0.094 0.906 35 H 0.095 0.905 36 H 0.113 0.887 37 H 0.092 0.908 38 H 0.237 0.763 39 H 0.111 0.889 40 H 0.113 0.887 41 H 0.096 0.904 42 H 0.216 0.784 43 H -0.179 1.179 44 H -0.175 1.175 45 H 0.164 0.836 46 H 0.074 0.926 47 H 0.075 0.925 48 H 0.121 0.879 49 H 0.153 0.847 50 H 0.151 0.849 51 H 0.094 0.906 52 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 0.404 -3.686 5.525 6.654 hybrid contribution -2.232 -0.111 1.828 2.887 sum -1.828 -3.797 7.353 8.475 Atomic orbital electron populations 1.23307 0.75930 1.03968 1.02708 1.86509 1.23810 1.33545 1.84013 1.23910 0.92415 0.81361 0.72265 1.90696 1.67357 1.36360 1.45042 1.21436 0.87263 1.00346 1.05997 1.21431 0.94374 0.93732 1.04189 1.22642 0.94852 0.97544 0.97945 0.88900 1.23551 0.98185 1.00027 0.96921 1.21862 0.83139 0.96876 0.96688 0.87626 1.45470 1.07256 1.61029 1.22606 1.20026 0.84026 0.79837 0.85822 1.90796 1.85426 1.42100 1.19923 1.22442 0.85238 1.02199 0.93862 1.86111 1.13974 1.76217 1.44028 1.18654 0.84924 0.97423 0.93567 1.19482 0.90679 1.02407 0.97361 1.25370 1.10251 0.94194 0.88231 1.86710 1.34431 1.66800 1.45915 0.93029 0.77379 0.85632 0.79820 1.20062 0.96790 1.00262 0.94962 1.18814 0.84857 0.96541 0.93949 1.86115 1.27745 1.72001 1.36847 1.23103 1.04227 0.96565 0.82992 1.21083 0.92125 1.04233 1.00954 1.21014 0.98750 1.02561 0.96062 1.23375 0.97414 0.97294 0.99693 0.91757 0.87885 0.91768 0.87517 0.87616 0.90588 0.90503 0.88670 0.90801 0.76317 0.88860 0.88717 0.90403 0.78380 1.17892 1.17524 0.83631 0.92620 0.92538 0.87856 0.84694 0.84919 0.90588 0.88193 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.35 10.57 -39.25 -0.41 -0.76 16 3 C 0.46 0.49 7.96 36.01 0.29 0.77 16 4 O -0.51 -2.12 15.73 -18.75 -0.29 -2.41 16 5 C -0.11 0.29 5.80 -27.88 -0.16 0.13 16 6 C -0.10 0.24 4.34 -26.73 -0.12 0.13 16 7 C -0.11 0.43 3.52 -89.81 -0.32 0.12 16 8 H 0.09 -0.48 8.13 -51.93 -0.42 -0.90 16 9 C -0.15 0.39 7.43 -25.91 -0.19 0.19 16 10 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 11 H 0.11 0.05 7.46 -51.93 -0.39 -0.33 16 12 N -0.71 1.89 5.26 -53.02 -0.28 1.61 16 13 C 0.52 0.21 7.91 -10.98 -0.09 0.13 16 14 O -0.51 -2.79 16.10 -14.35 -0.23 -3.02 16 15 C 0.04 -0.08 5.22 36.01 0.19 0.11 16 16 O -0.29 -0.54 8.56 -39.59 -0.34 -0.88 16 17 C 0.10 0.16 6.62 -39.24 -0.26 -0.10 16 18 C -0.10 -0.23 5.27 -104.50 -0.55 -0.79 16 19 C -0.07 -0.22 2.33 36.00 0.08 -0.13 16 20 O -0.53 -2.04 12.65 -35.23 -0.45 -2.49 16 21 Si 0.74 1.32 30.17 -169.99 -5.13 -3.81 16 22 C -0.10 -0.18 8.59 -39.45 -0.34 -0.52 16 23 C 0.10 0.14 6.69 -39.24 -0.26 -0.12 16 24 O -0.31 -0.36 10.50 -19.68 -0.21 -0.57 16 25 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 26 C -0.17 0.04 9.03 -39.45 -0.36 -0.32 16 27 C -0.17 0.07 9.03 -39.45 -0.36 -0.28 16 28 C -0.14 0.47 7.39 -25.92 -0.19 0.28 16 29 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 30 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 31 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 32 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 33 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 34 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 35 H 0.08 -0.10 7.81 -51.93 -0.41 -0.50 16 36 H 0.09 -0.22 7.90 -51.93 -0.41 -0.63 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.40 -2.33 8.70 -40.82 -0.36 -2.69 16 39 H 0.09 -0.38 7.65 -51.93 -0.40 -0.78 16 40 H 0.10 -0.42 7.67 -51.93 -0.40 -0.82 16 41 H 0.08 0.30 7.82 -51.93 -0.41 -0.11 16 42 H 0.37 0.89 8.60 45.56 0.39 1.28 16 43 H -0.25 -1.15 7.11 56.52 0.40 -0.75 16 44 H -0.25 -0.74 7.11 56.52 0.40 -0.33 16 45 H 0.15 0.03 5.13 -52.49 -0.27 -0.24 16 46 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 47 H 0.06 -0.19 7.66 -51.93 -0.40 -0.58 16 48 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 49 H 0.14 -0.34 6.29 -52.48 -0.33 -0.67 16 50 H 0.13 -0.46 6.29 -52.49 -0.33 -0.79 16 51 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 52 H 0.10 -0.31 8.10 -51.93 -0.42 -0.73 16 LS Contribution 431.68 15.07 6.51 6.51 Total: 0.00 -11.30 431.68 -9.63 -20.94 By element: Atomic # 1 Polarization: -8.23 SS G_CDS: -7.94 Total: -16.17 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -0.86 Total: 1.06 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -0.28 Total: 1.61 kcal Atomic # 8 Polarization: -8.20 SS G_CDS: -1.93 Total: -10.13 kcal Atomic # 14 Polarization: 1.32 SS G_CDS: -5.13 Total: -3.81 kcal Total LS contribution 6.51 Total: 6.51 kcal Total: -11.30 -9.63 -20.94 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.767 kcal (2) G-P(sol) polarization free energy of solvation -11.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.069 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.634 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.935 kcal (6) G-S(sol) free energy of system = (1) + (5) -173.703 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds