Wall clock time and date at job start Tue Mar 9 2021 13:43:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34227 * 116.99760 * 2 1 4 4 O 1.20826 * 120.00103 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99899 * 179.97438 * 3 2 1 6 6 C 1.52999 * 109.47367 * 180.02562 * 5 3 2 7 7 C 1.52997 * 109.47336 * 179.97438 * 6 5 3 8 8 H 1.09000 * 112.84933 * 316.19893 * 7 6 5 9 9 C 1.53787 * 113.68803 * 87.46569 * 7 6 5 10 10 C 1.53783 * 87.08072 * 139.99568 * 9 7 6 11 11 H 1.08998 * 113.68821 * 220.01195 * 10 9 7 12 12 N 1.46496 * 113.61724 * 89.11203 * 10 9 7 13 13 C 1.34774 * 119.99544 * 107.50420 * 12 10 9 14 14 O 1.21279 * 120.00472 * 0.02562 * 13 12 10 15 15 C 1.50706 * 120.00020 * 180.02562 * 13 12 10 16 16 O 1.42895 * 109.47147 * 180.02562 * 15 13 12 17 17 C 1.35982 * 117.00105 * 179.97438 * 16 15 13 18 18 C 1.38674 * 120.00234 * 179.97438 * 17 16 15 19 19 C 1.50693 * 120.00262 * 0.02562 * 18 17 16 20 20 O 1.42903 * 109.47306 * 285.00267 * 19 18 17 21 21 Si 1.86296 * 109.47397 * 165.00335 * 19 18 17 22 22 C 1.38153 * 120.00103 * 180.02562 * 18 17 16 23 23 C 1.38684 * 119.99794 * 359.97438 * 22 18 17 24 24 O 1.35981 * 119.99935 * 179.97438 * 23 22 18 25 25 C 1.42899 * 117.00130 * 180.02562 * 24 23 22 26 26 C 1.38715 * 119.99886 * 0.02562 * 23 22 18 27 27 C 1.38109 * 120.00081 * 359.72022 * 26 23 22 28 28 C 1.53776 * 113.61769 * 185.00018 * 7 6 5 29 29 H 1.09004 * 109.46807 * 60.00234 * 1 2 3 30 30 H 1.09000 * 109.46857 * 179.97438 * 1 2 3 31 31 H 1.08998 * 109.47383 * 300.00152 * 1 2 3 32 32 H 1.09000 * 109.47036 * 60.00076 * 5 3 2 33 33 H 1.08999 * 109.47051 * 300.00539 * 5 3 2 34 34 H 1.09003 * 109.46608 * 59.99930 * 6 5 3 35 35 H 1.08994 * 109.46989 * 300.00500 * 6 5 3 36 36 H 1.08998 * 113.61140 * 25.44539 * 9 7 6 37 37 H 1.09002 * 113.61226 * 254.54260 * 9 7 6 38 38 H 0.96994 * 120.00700 * 287.50539 * 12 10 9 39 39 H 1.09001 * 109.46953 * 299.99667 * 15 13 12 40 40 H 1.09000 * 109.47318 * 59.99264 * 15 13 12 41 41 H 1.09005 * 109.46999 * 45.00238 * 19 18 17 42 42 H 0.96703 * 113.99486 * 59.99724 * 20 19 18 43 43 H 1.48499 * 109.99920 * 178.68524 * 21 19 18 44 44 H 1.48506 * 109.99680 * 300.00126 * 21 19 18 45 45 H 1.07994 * 120.00711 * 179.97438 * 22 18 17 46 46 H 1.09003 * 109.47022 * 300.00080 * 25 24 23 47 47 H 1.09005 * 109.47153 * 59.99778 * 25 24 23 48 48 H 1.08998 * 109.47290 * 179.97438 * 25 24 23 49 49 H 1.08009 * 119.99721 * 179.97438 * 26 23 22 50 50 H 1.08001 * 120.00093 * 180.29070 * 27 26 23 51 51 H 1.09004 * 113.61741 * 105.38374 * 28 7 6 52 52 H 1.09004 * 113.68739 * 334.49720 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0002 2.7421 0.0011 7 6 5.5280 2.8222 0.0023 8 1 5.9881 2.1203 0.6979 9 6 6.1494 2.7925 -1.4041 10 6 7.1405 3.8562 -0.9030 11 1 7.3547 4.6347 -1.6352 12 7 8.3513 3.2929 -0.3007 13 6 9.5260 3.3631 -0.9577 14 8 9.5808 3.8931 -2.0472 15 6 10.7716 2.7831 -0.3385 16 8 11.8784 2.9808 -1.2204 17 6 13.0870 2.5128 -0.8088 18 6 14.2033 2.6707 -1.6163 19 6 14.0772 3.3615 -2.9496 20 8 13.4467 2.4828 -3.8836 21 14 15.7714 3.8196 -3.5744 22 6 15.4310 2.1948 -1.1983 23 6 15.5472 1.5595 0.0290 24 8 16.7556 1.0906 0.4402 25 6 16.8019 0.4464 1.7149 26 6 14.4305 1.4015 0.8366 27 6 13.2042 1.8820 0.4211 28 6 6.0697 4.2561 0.1257 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3634 0.5138 0.8899 32 1 3.9564 0.7806 -0.8892 33 1 3.9557 0.7809 0.8908 34 1 3.6100 3.2359 0.8911 35 1 3.6107 3.2364 -0.8888 36 1 5.4798 3.1530 -2.1849 37 1 6.6192 1.8412 -1.6538 38 1 8.3077 2.8693 0.5707 39 1 10.9707 3.2802 0.6109 40 1 10.6291 1.7161 -0.1670 41 1 13.4756 4.2634 -2.8361 42 1 12.5588 2.2026 -3.6223 43 1 15.6631 4.4732 -4.9034 44 1 16.4377 4.7333 -2.6118 45 1 16.3004 2.3173 -1.8272 46 1 16.4808 1.1455 2.4871 47 1 16.1385 -0.4185 1.7093 48 1 17.8215 0.1205 1.9205 49 1 14.5209 0.9064 1.7923 50 1 12.3357 1.7632 1.0520 51 1 6.4751 4.4865 1.1110 52 1 5.3791 5.0178 -0.2364 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17523010_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:31 Heat of formation + Delta-G solvation = -174.886693 kcal Electronic energy + Delta-G solvation = -34061.360997 eV Core-core repulsion = 29187.554763 eV Total energy + Delta-G solvation = -4873.806233 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.87132 -41.58204 -41.20502 -40.15354 -39.35147 -38.08940 -37.64263 -36.92373 -35.17374 -33.37535 -32.79680 -31.02995 -29.63157 -28.91834 -27.95176 -26.83917 -26.59430 -26.54294 -24.02042 -23.19214 -22.40974 -21.93716 -21.55577 -20.30500 -19.52257 -18.82234 -18.62064 -18.44739 -18.03950 -17.69874 -17.55351 -17.48021 -17.42641 -16.91873 -16.60037 -16.12166 -15.99972 -15.74658 -15.59098 -15.43768 -15.24149 -15.16413 -14.77080 -14.43114 -14.40598 -14.21411 -14.09912 -14.07401 -13.55184 -13.49982 -13.41778 -13.36612 -13.04641 -13.02604 -12.66767 -12.49828 -12.30357 -12.14562 -12.02906 -11.88902 -11.84086 -11.65947 -11.43725 -11.31040 -11.29158 -11.23600 -11.09252 -11.00284 -10.15120 -10.08962 -8.81543 -4.93873 0.07201 0.34037 1.14871 1.33355 1.41054 1.43483 1.57832 1.77874 1.91309 2.35800 2.54762 2.57577 3.46429 3.50949 3.52450 3.55531 3.72148 3.74254 3.84773 3.86149 3.87076 3.95377 4.08501 4.10183 4.13925 4.20196 4.21533 4.24236 4.27486 4.28443 4.31158 4.46036 4.46581 4.54353 4.59574 4.69314 4.70911 4.76000 4.80886 4.81361 4.86705 4.90937 4.97915 5.04279 5.12101 5.12994 5.21562 5.23000 5.30810 5.40711 5.42692 5.62082 6.13699 6.41704 6.47236 6.52165 6.68664 7.11846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.368 6.368 3 C 0.453 3.547 4 O -0.547 6.547 5 C -0.107 4.107 6 C -0.097 4.097 7 C -0.093 4.093 8 H 0.119 0.881 9 C -0.147 4.147 10 C 0.111 3.889 11 H 0.074 0.926 12 N -0.690 5.690 13 C 0.514 3.486 14 O -0.572 6.572 15 C 0.038 3.962 16 O -0.317 6.317 17 C 0.090 3.910 18 C -0.119 4.119 19 C -0.081 4.081 20 O -0.545 6.545 21 Si 0.810 3.190 22 C -0.119 4.119 23 C 0.090 3.910 24 O -0.333 6.333 25 C 0.017 3.983 26 C -0.161 4.161 27 C -0.159 4.159 28 C -0.133 4.133 29 H 0.058 0.942 30 H 0.128 0.872 31 H 0.060 0.940 32 H 0.122 0.878 33 H 0.132 0.868 34 H 0.067 0.933 35 H 0.058 0.942 36 H 0.086 0.914 37 H 0.074 0.926 38 H 0.422 0.578 39 H 0.123 0.877 40 H 0.129 0.871 41 H 0.061 0.939 42 H 0.372 0.628 43 H -0.295 1.295 44 H -0.264 1.264 45 H 0.152 0.848 46 H 0.066 0.934 47 H 0.068 0.932 48 H 0.114 0.886 49 H 0.162 0.838 50 H 0.169 0.831 51 H 0.089 0.911 52 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.458 -7.267 10.107 12.457 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.285 6.285 3 C 0.299 3.701 4 O -0.437 6.437 5 C -0.145 4.145 6 C -0.134 4.134 7 C -0.112 4.112 8 H 0.137 0.863 9 C -0.186 4.186 10 C 0.005 3.995 11 H 0.092 0.908 12 N -0.344 5.344 13 C 0.301 3.699 14 O -0.451 6.451 15 C -0.040 4.040 16 O -0.231 6.231 17 C 0.045 3.955 18 C -0.120 4.120 19 C -0.188 4.188 20 O -0.351 6.351 21 Si 0.712 3.288 22 C -0.137 4.137 23 C 0.045 3.955 24 O -0.248 6.248 25 C -0.077 4.077 26 C -0.180 4.180 27 C -0.177 4.177 28 C -0.171 4.171 29 H 0.077 0.923 30 H 0.146 0.854 31 H 0.079 0.921 32 H 0.140 0.860 33 H 0.150 0.850 34 H 0.086 0.914 35 H 0.077 0.923 36 H 0.104 0.896 37 H 0.093 0.907 38 H 0.260 0.740 39 H 0.141 0.859 40 H 0.147 0.853 41 H 0.079 0.921 42 H 0.220 0.780 43 H -0.222 1.222 44 H -0.190 1.190 45 H 0.169 0.831 46 H 0.085 0.915 47 H 0.086 0.914 48 H 0.132 0.868 49 H 0.179 0.821 50 H 0.186 0.814 51 H 0.108 0.892 52 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 0.552 -5.783 8.519 10.311 hybrid contribution -2.366 0.525 0.947 2.602 sum -1.814 -5.258 9.466 10.979 Atomic orbital electron populations 1.23484 0.75312 1.05489 1.02276 1.86515 1.24627 1.33571 1.83747 1.24686 0.93768 0.80769 0.70904 1.90679 1.68466 1.37520 1.47042 1.21564 0.84604 1.00403 1.07884 1.21369 0.95242 0.93842 1.02980 1.22584 0.93704 0.97570 0.97298 0.86253 1.23522 0.97834 0.99541 0.97709 1.21849 0.83805 0.96775 0.97066 0.90789 1.45306 1.06149 1.59936 1.22988 1.20564 0.85326 0.78911 0.85114 1.90776 1.86391 1.45121 1.22771 1.22720 0.83039 1.04340 0.93855 1.86084 1.14781 1.76602 1.45629 1.18793 0.84597 0.97816 0.94324 1.19445 0.91700 1.03619 0.97255 1.25501 1.10418 0.93691 0.89235 1.86662 1.34801 1.66995 1.46655 0.92237 0.76097 0.84146 0.76337 1.20179 0.96782 1.00933 0.95795 1.18983 0.85626 0.96776 0.94099 1.86087 1.27865 1.72334 1.38481 1.23358 1.05425 0.97056 0.81887 1.21427 0.91532 1.03441 1.01567 1.21378 0.99932 1.01036 0.95342 1.23335 0.96482 0.97665 0.99661 0.92346 0.85421 0.92115 0.85991 0.84983 0.91384 0.92290 0.89552 0.90726 0.73965 0.85927 0.85350 0.92128 0.77977 1.22243 1.18995 0.83134 0.91530 0.91359 0.86776 0.82063 0.81381 0.89223 0.88907 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.62 10.57 -51.39 -0.54 -1.16 16 3 C 0.45 0.99 7.96 71.24 0.57 1.55 16 4 O -0.55 -5.18 15.73 21.96 0.35 -4.83 16 5 C -0.11 0.70 5.80 29.85 0.17 0.87 16 6 C -0.10 0.52 4.34 30.59 0.13 0.65 16 7 C -0.09 0.86 3.52 -10.27 -0.04 0.83 16 8 H 0.12 -1.66 8.13 -2.39 -0.02 -1.68 16 9 C -0.15 0.78 7.43 31.12 0.23 1.01 16 10 C 0.11 -0.35 4.32 45.52 0.20 -0.16 16 11 H 0.07 0.27 7.46 -2.39 -0.02 0.25 16 12 N -0.69 4.34 5.26 -440.04 -2.32 2.02 16 13 C 0.51 0.45 7.91 87.66 0.69 1.14 16 14 O -0.57 -7.54 16.10 16.01 0.26 -7.28 16 15 C 0.04 -0.20 5.22 71.24 0.37 0.17 16 16 O -0.32 -1.24 8.56 -74.30 -0.64 -1.88 16 17 C 0.09 0.25 6.62 22.49 0.15 0.40 16 18 C -0.12 -0.68 5.27 -19.78 -0.10 -0.79 16 19 C -0.08 -0.66 2.33 71.23 0.17 -0.49 16 20 O -0.54 -5.36 12.65 -148.98 -1.89 -7.25 16 21 Si 0.81 4.40 30.17 68.60 2.07 6.47 16 22 C -0.12 -0.49 8.59 22.36 0.19 -0.30 16 23 C 0.09 0.20 6.69 22.49 0.15 0.35 16 24 O -0.33 -0.58 10.50 -93.34 -0.98 -1.56 16 25 C 0.02 -0.11 9.81 113.37 1.11 1.01 16 26 C -0.16 0.42 9.03 22.35 0.20 0.62 16 27 C -0.16 0.51 9.03 22.35 0.20 0.72 16 28 C -0.13 0.97 7.39 31.12 0.23 1.20 16 29 H 0.06 -0.02 8.13 -2.38 -0.02 -0.04 16 30 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 31 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 32 H 0.12 -1.12 8.14 -2.39 -0.02 -1.13 16 33 H 0.13 -1.51 8.14 -2.39 -0.02 -1.53 16 34 H 0.07 -0.22 8.10 -2.39 -0.02 -0.24 16 35 H 0.06 -0.09 7.81 -2.39 -0.02 -0.11 16 36 H 0.09 -0.30 7.90 -2.39 -0.02 -0.31 16 37 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.42 -6.06 8.70 -92.71 -0.81 -6.87 16 39 H 0.12 -1.39 7.65 -2.39 -0.02 -1.40 16 40 H 0.13 -1.57 7.67 -2.39 -0.02 -1.59 16 41 H 0.06 0.65 7.82 -2.38 -0.02 0.63 16 42 H 0.37 2.70 8.60 -74.06 -0.64 2.06 16 43 H -0.29 -3.49 7.11 99.48 0.71 -2.78 16 44 H -0.26 -1.94 7.11 99.48 0.71 -1.23 16 45 H 0.15 0.22 5.13 -2.91 -0.01 0.21 16 46 H 0.07 -0.57 7.66 -2.39 -0.02 -0.59 16 47 H 0.07 -0.60 7.66 -2.38 -0.02 -0.61 16 48 H 0.11 -1.01 8.14 -2.39 -0.02 -1.03 16 49 H 0.16 -1.37 6.29 -2.91 -0.02 -1.38 16 50 H 0.17 -1.89 6.29 -2.91 -0.02 -1.91 16 51 H 0.09 -0.86 8.14 -2.38 -0.02 -0.88 16 52 H 0.09 -0.51 8.10 -2.38 -0.02 -0.53 16 Total: 0.00 -31.32 431.68 1.70 -29.62 By element: Atomic # 1 Polarization: -23.64 SS G_CDS: -0.44 Total: -24.08 kcal Atomic # 6 Polarization: 4.10 SS G_CDS: 5.83 Total: 9.93 kcal Atomic # 7 Polarization: 4.34 SS G_CDS: -2.32 Total: 2.02 kcal Atomic # 8 Polarization: -20.52 SS G_CDS: -3.44 Total: -23.96 kcal Atomic # 14 Polarization: 4.40 SS G_CDS: 2.07 Total: 6.47 kcal Total: -31.32 1.70 -29.62 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.265 kcal (2) G-P(sol) polarization free energy of solvation -31.319 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.697 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.622 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.887 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds