Wall clock time and date at job start Tue Mar 9 2021 13:43:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34234 * 117.00231 * 2 1 4 4 O 1.20826 * 120.00003 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99803 * 179.97438 * 3 2 1 6 6 C 1.53001 * 109.46877 * 179.97438 * 5 3 2 7 7 C 1.52996 * 109.47179 * 180.02562 * 6 5 3 8 8 H 1.09000 * 112.84839 * 316.19500 * 7 6 5 9 9 C 1.54044 * 113.62139 * 87.50817 * 7 6 5 10 10 C 1.53778 * 86.98676 * 139.98110 * 9 7 6 11 11 H 1.09001 * 113.61264 * 219.98064 * 10 9 7 12 12 N 1.46499 * 113.61780 * 89.16061 * 10 9 7 13 13 C 1.34777 * 119.99689 * 105.86468 * 12 10 9 14 14 O 1.21273 * 120.00331 * 359.97438 * 13 12 10 15 15 C 1.50707 * 119.99569 * 180.02562 * 13 12 10 16 16 O 1.42897 * 109.46880 * 179.97438 * 15 13 12 17 17 C 1.35922 * 116.99994 * 180.02562 * 16 15 13 18 18 C 1.38792 * 120.05945 * 179.97438 * 17 16 15 19 19 Br 1.89098 * 120.03592 * 359.97438 * 18 17 16 20 20 C 1.38237 * 119.92363 * 179.76535 * 18 17 16 21 21 C 1.38247 * 120.04956 * 0.50047 * 20 18 17 22 22 C 1.50699 * 119.94179 * 179.77046 * 21 20 18 23 23 O 1.42892 * 109.47249 * 119.72765 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 359.72151 * 22 21 20 25 25 C 1.38278 * 120.11242 * 359.49688 * 21 20 18 26 26 C 1.38143 * 120.07453 * 0.24773 * 25 21 20 27 27 C 1.53778 * 87.17379 * 334.56960 * 10 9 7 28 28 H 1.09009 * 109.46714 * 60.00664 * 1 2 3 29 29 H 1.08997 * 109.47539 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47419 * 300.00782 * 1 2 3 31 31 H 1.09007 * 109.47060 * 59.99875 * 5 3 2 32 32 H 1.08990 * 109.47255 * 299.99573 * 5 3 2 33 33 H 1.08997 * 109.47008 * 60.00227 * 6 5 3 34 34 H 1.09002 * 109.47471 * 300.00569 * 6 5 3 35 35 H 1.09002 * 113.61490 * 25.47165 * 9 7 6 36 36 H 1.09004 * 113.69217 * 254.49185 * 9 7 6 37 37 H 0.97002 * 120.00151 * 285.86139 * 12 10 9 38 38 H 1.08998 * 109.47025 * 59.99737 * 15 13 12 39 39 H 1.08995 * 109.47081 * 300.00012 * 15 13 12 40 40 H 1.08004 * 119.97522 * 180.27456 * 20 18 17 41 41 H 1.09004 * 109.46453 * 239.72833 * 22 21 20 42 42 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 43 43 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 44 44 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 45 45 H 1.08004 * 119.95920 * 180.27503 * 25 21 20 46 46 H 1.08004 * 120.02035 * 179.97438 * 26 25 21 47 47 H 1.08995 * 113.61692 * 140.02378 * 27 10 9 48 48 H 1.08997 * 113.61474 * 270.93021 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 -0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.0002 2.7420 -0.0002 7 6 5.5281 2.8220 -0.0002 8 1 5.9887 2.1206 0.6954 9 6 6.1477 2.7923 -1.4103 10 6 7.1385 3.8561 -0.9090 11 1 7.3512 4.6345 -1.6418 12 7 8.3507 3.2929 -0.3093 13 6 9.5178 3.3357 -0.9820 14 8 9.5644 3.8400 -2.0840 15 6 10.7646 2.7558 -0.3653 16 8 11.8622 2.9207 -1.2654 17 6 13.0699 2.4478 -0.8591 18 6 14.1792 2.5739 -1.6836 19 35 14.0121 3.4036 -3.3747 20 6 15.4072 2.0963 -1.2655 21 6 15.5283 1.4843 -0.0318 22 6 16.8671 0.9599 0.4194 23 8 17.2564 1.6217 1.6246 24 14 18.1381 1.2814 -0.9041 25 6 14.4244 1.3577 0.7912 26 6 13.1960 1.8380 0.3805 27 6 6.0699 4.2561 0.1219 28 1 -0.3633 0.5138 -0.8901 29 1 -0.3634 -1.0276 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 3.9564 0.7804 -0.8892 32 1 3.9557 0.7809 0.8908 33 1 3.6102 3.2366 0.8893 34 1 3.6108 3.2356 -0.8906 35 1 5.4767 3.1533 -2.1898 36 1 6.6181 1.8417 -1.6620 37 1 8.3134 2.8892 0.5720 38 1 10.6128 1.6946 -0.1685 39 1 10.9809 3.2715 0.5702 40 1 16.2718 2.1980 -1.9046 41 1 16.7947 -0.1125 0.6008 42 1 17.3406 2.5810 1.5370 43 1 18.2235 2.7375 -1.1833 44 1 19.4629 0.7683 -0.4715 45 1 14.5228 0.8832 1.7564 46 1 12.3342 1.7382 1.0238 47 1 6.4773 4.4865 1.1062 48 1 5.3776 5.0165 -0.2394 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17523010_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:43:47 Heat of formation + Delta-G solvation = -130.463579 kcal Electronic energy + Delta-G solvation = -31364.321376 eV Core-core repulsion = 26626.843281 eV Total energy + Delta-G solvation = -4737.478094 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.076 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -41.76503 -41.52946 -41.05136 -39.74315 -38.91034 -37.63385 -37.32227 -35.14221 -33.53821 -33.28274 -32.13252 -30.49784 -29.66384 -28.92536 -26.88048 -26.58670 -26.26665 -24.16542 -23.27872 -22.48143 -21.87850 -21.53791 -20.28403 -19.51151 -18.65829 -18.54087 -18.13097 -17.68553 -17.55111 -17.47832 -17.29164 -16.76819 -16.39808 -16.23476 -15.92150 -15.79430 -15.60458 -15.26595 -15.16317 -14.78901 -14.63974 -14.39142 -14.30168 -14.14963 -14.01304 -13.86091 -13.41813 -13.37584 -13.35566 -13.02224 -12.64199 -12.41893 -12.35352 -12.18980 -12.11713 -11.87406 -11.85841 -11.82742 -11.74548 -11.64284 -11.27577 -11.19024 -11.06953 -10.98963 -10.63526 -10.11350 -9.98655 -9.30409 -4.94750 -0.01705 0.09575 0.65385 1.16215 1.28944 1.40827 1.45464 1.56919 1.79215 1.92912 2.40948 2.50825 3.41441 3.48281 3.52485 3.53885 3.55076 3.73843 3.79429 3.83524 3.88659 3.89770 4.04695 4.09755 4.10164 4.22056 4.25326 4.28929 4.32746 4.35743 4.51911 4.56664 4.61455 4.67972 4.70501 4.78403 4.80953 4.83978 4.89375 4.93151 5.05364 5.06774 5.14470 5.25156 5.31334 5.33007 5.42442 5.48094 5.65014 6.07267 6.47298 6.48219 6.69992 7.16250 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.368 6.368 3 C 0.453 3.547 4 O -0.547 6.547 5 C -0.107 4.107 6 C -0.097 4.097 7 C -0.094 4.094 8 H 0.120 0.880 9 C -0.148 4.148 10 C 0.112 3.888 11 H 0.074 0.926 12 N -0.690 5.690 13 C 0.513 3.487 14 O -0.569 6.569 15 C 0.034 3.966 16 O -0.305 6.305 17 C 0.150 3.850 18 C -0.141 4.141 19 Br -0.051 7.051 20 C -0.056 4.056 21 C -0.149 4.149 22 C -0.061 4.061 23 O -0.543 6.543 24 Si 0.733 3.267 25 C -0.033 4.033 26 C -0.194 4.194 27 C -0.133 4.133 28 H 0.058 0.942 29 H 0.127 0.873 30 H 0.060 0.940 31 H 0.122 0.878 32 H 0.132 0.868 33 H 0.068 0.932 34 H 0.058 0.942 35 H 0.085 0.915 36 H 0.073 0.927 37 H 0.422 0.578 38 H 0.133 0.867 39 H 0.129 0.871 40 H 0.145 0.855 41 H 0.138 0.862 42 H 0.386 0.614 43 H -0.288 1.288 44 H -0.296 1.296 45 H 0.157 0.843 46 H 0.174 0.826 47 H 0.090 0.910 48 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.815 -6.386 6.838 9.530 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.285 6.285 3 C 0.299 3.701 4 O -0.437 6.437 5 C -0.145 4.145 6 C -0.134 4.134 7 C -0.112 4.112 8 H 0.138 0.862 9 C -0.187 4.187 10 C 0.006 3.994 11 H 0.092 0.908 12 N -0.344 5.344 13 C 0.300 3.700 14 O -0.447 6.447 15 C -0.043 4.043 16 O -0.217 6.217 17 C 0.102 3.898 18 C -0.221 4.221 19 Br 0.034 6.966 20 C -0.075 4.075 21 C -0.150 4.150 22 C -0.171 4.171 23 O -0.351 6.351 24 Si 0.640 3.360 25 C -0.051 4.051 26 C -0.213 4.213 27 C -0.171 4.171 28 H 0.077 0.923 29 H 0.146 0.854 30 H 0.079 0.921 31 H 0.140 0.860 32 H 0.150 0.850 33 H 0.086 0.914 34 H 0.077 0.923 35 H 0.104 0.896 36 H 0.092 0.908 37 H 0.261 0.739 38 H 0.150 0.850 39 H 0.147 0.853 40 H 0.162 0.838 41 H 0.155 0.845 42 H 0.236 0.764 43 H -0.214 1.214 44 H -0.224 1.224 45 H 0.175 0.825 46 H 0.192 0.808 47 H 0.109 0.891 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -1.406 -5.533 5.243 7.751 hybrid contribution -0.478 0.954 1.115 1.543 sum -1.884 -4.579 6.358 8.058 Atomic orbital electron populations 1.23480 0.75331 1.05473 1.02271 1.86515 1.24611 1.33589 1.83755 1.24693 0.93774 0.80764 0.70901 1.90678 1.68469 1.37510 1.47037 1.21565 0.84582 1.00429 1.07875 1.21372 0.95286 0.93816 1.02968 1.22635 0.93663 0.97628 0.97241 0.86246 1.23569 0.97896 0.99555 0.97669 1.21835 0.83778 0.96704 0.97074 0.90814 1.45304 1.06529 1.60813 1.21788 1.20526 0.85286 0.78884 0.85337 1.90791 1.86152 1.45678 1.22047 1.22834 0.83158 1.04896 0.93448 1.86245 1.15170 1.75870 1.44449 1.18810 0.84350 0.93495 0.93146 1.21135 0.95216 1.10817 0.94910 1.96775 1.98587 1.79726 1.21492 1.20918 0.95062 0.95264 0.96235 1.20227 0.97426 1.02726 0.94650 1.24882 0.96595 1.01319 0.94332 1.86576 1.90037 1.25785 1.32680 0.94338 0.76703 0.81317 0.83654 1.21216 0.90260 0.94139 0.99463 1.21614 1.01077 1.03513 0.95094 1.23323 0.96468 0.97612 0.99652 0.92342 0.85442 0.92128 0.86011 0.84978 0.91378 0.92310 0.89602 0.90824 0.73947 0.84963 0.85323 0.83755 0.84467 0.76421 1.21424 1.22402 0.82538 0.80847 0.89125 0.88903 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.60 10.57 -51.46 -0.54 -1.14 16 3 C 0.45 0.96 7.96 71.24 0.57 1.53 16 4 O -0.55 -5.13 15.73 21.96 0.35 -4.79 16 5 C -0.11 0.70 5.80 29.85 0.17 0.88 16 6 C -0.10 0.53 4.34 30.59 0.13 0.66 16 7 C -0.09 0.88 3.54 -10.18 -0.04 0.84 16 8 H 0.12 -1.68 8.13 -2.39 -0.02 -1.70 16 9 C -0.15 0.78 7.45 31.21 0.23 1.01 16 10 C 0.11 -0.38 4.29 45.52 0.20 -0.19 16 11 H 0.07 0.24 7.50 -2.39 -0.02 0.23 16 12 N -0.69 4.56 5.26 -440.05 -2.32 2.24 16 13 C 0.51 0.33 7.91 87.66 0.69 1.03 16 14 O -0.57 -7.57 16.12 16.03 0.26 -7.31 16 15 C 0.03 -0.20 5.22 71.24 0.37 0.17 16 16 O -0.31 -1.14 9.01 -73.63 -0.66 -1.80 16 17 C 0.15 0.19 6.68 22.52 0.15 0.34 16 18 C -0.14 -0.56 6.24 22.40 0.14 -0.42 16 19 Br -0.05 -0.40 33.16 -20.37 -0.68 -1.08 16 20 C -0.06 -0.02 8.40 22.27 0.19 0.17 16 21 C -0.15 0.43 5.39 -19.85 -0.11 0.32 16 22 C -0.06 0.22 2.82 71.24 0.20 0.42 16 23 O -0.54 0.62 12.77 -148.98 -1.90 -1.29 16 24 Si 0.73 -1.37 29.78 68.60 2.04 0.67 16 25 C -0.03 0.17 9.60 22.26 0.21 0.39 16 26 C -0.19 1.09 9.04 22.36 0.20 1.29 16 27 C -0.13 1.00 7.38 31.12 0.23 1.23 16 28 H 0.06 -0.02 8.13 -2.38 -0.02 -0.04 16 29 H 0.13 -0.89 8.14 -2.39 -0.02 -0.91 16 30 H 0.06 -0.05 8.13 -2.39 -0.02 -0.07 16 31 H 0.12 -1.12 8.14 -2.38 -0.02 -1.14 16 32 H 0.13 -1.52 8.14 -2.39 -0.02 -1.53 16 33 H 0.07 -0.23 8.10 -2.39 -0.02 -0.25 16 34 H 0.06 -0.09 7.80 -2.39 -0.02 -0.11 16 35 H 0.09 -0.29 7.90 -2.39 -0.02 -0.31 16 36 H 0.07 -0.36 8.14 -2.38 -0.02 -0.38 16 37 H 0.42 -6.25 8.70 -92.71 -0.81 -7.06 16 38 H 0.13 -1.75 7.66 -2.39 -0.02 -1.77 16 39 H 0.13 -1.62 7.66 -2.39 -0.02 -1.64 16 40 H 0.15 -0.20 4.87 -2.91 -0.01 -0.21 16 41 H 0.14 -0.90 7.96 -2.38 -0.02 -0.91 16 42 H 0.39 -2.25 8.70 -74.06 -0.64 -2.89 16 43 H -0.29 -0.92 7.11 99.48 0.71 -0.21 16 44 H -0.30 -1.61 7.11 99.48 0.71 -0.91 16 45 H 0.16 -1.39 8.06 -2.91 -0.02 -1.41 16 46 H 0.17 -2.30 6.30 -2.91 -0.02 -2.32 16 47 H 0.09 -0.91 8.14 -2.39 -0.02 -0.93 16 48 H 0.09 -0.54 8.10 -2.39 -0.02 -0.56 16 Total: 0.00 -31.62 423.66 0.89 -30.73 By element: Atomic # 1 Polarization: -26.65 SS G_CDS: -0.40 Total: -27.05 kcal Atomic # 6 Polarization: 6.08 SS G_CDS: 4.74 Total: 10.82 kcal Atomic # 7 Polarization: 4.56 SS G_CDS: -2.32 Total: 2.24 kcal Atomic # 8 Polarization: -13.82 SS G_CDS: -2.50 Total: -16.33 kcal Atomic # 14 Polarization: -1.37 SS G_CDS: 2.04 Total: 0.67 kcal Atomic # 35 Polarization: -0.40 SS G_CDS: -0.68 Total: -1.08 kcal Total: -31.62 0.89 -30.73 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17523010_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.738 kcal (2) G-P(sol) polarization free energy of solvation -31.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.355 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.891 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.726 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds