Wall clock time and date at job start Tue Mar 9 2021 13:49:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34233 * 116.99870 * 2 1 4 4 O 1.20819 * 119.99719 * 359.97438 * 3 2 1 5 5 C 1.50695 * 119.99680 * 179.97438 * 3 2 1 6 6 C 1.55221 * 108.32724 * 287.93814 * 5 3 2 7 7 Si 1.90180 * 98.94240 * 218.37889 * 6 5 3 8 8 C 1.86296 * 111.97135 * 270.92420 * 7 6 5 9 9 C 1.86304 * 112.04430 * 144.60026 * 7 6 5 10 10 C 1.90072 * 96.40597 * 27.75038 * 7 6 5 11 11 N 1.45027 * 108.15106 * 161.45122 * 5 3 2 12 12 C 1.34768 * 120.86126 * 300.81168 * 11 5 3 13 13 O 1.21574 * 119.99838 * 3.54239 * 12 11 5 14 14 C 1.47727 * 120.00367 * 183.54558 * 12 11 5 15 15 C 1.39634 * 120.11333 * 324.55075 * 14 12 11 16 16 C 1.37858 * 119.87594 * 180.02562 * 15 14 12 17 17 C 1.38637 * 120.11762 * 0.02562 * 16 15 14 18 18 F 1.35106 * 119.87716 * 179.97438 * 17 16 15 19 19 C 1.38675 * 120.24050 * 359.95554 * 17 16 15 20 20 C 1.50703 * 119.93969 * 179.74969 * 19 17 16 21 21 O 1.42900 * 109.47105 * 74.99883 * 20 19 17 22 22 Si 1.86304 * 109.46935 * 314.99872 * 20 19 17 23 23 H 1.48505 * 109.47015 * 60.00295 * 22 20 19 24 24 H 1.48500 * 109.47165 * 179.97438 * 22 20 19 25 25 H 1.48496 * 109.47310 * 300.00272 * 22 20 19 26 26 C 1.37805 * 120.11737 * 0.02664 * 19 17 16 27 27 H 1.09001 * 109.46898 * 60.00698 * 1 2 3 28 28 H 1.09000 * 109.47251 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47371 * 300.00356 * 1 2 3 30 30 H 1.08998 * 107.97091 * 44.64454 * 5 3 2 31 31 H 1.08994 * 111.66567 * 100.86538 * 6 5 3 32 32 H 1.09007 * 111.33769 * 335.76866 * 6 5 3 33 33 H 1.08996 * 109.47323 * 167.00570 * 8 7 6 34 34 H 1.08998 * 109.47313 * 287.00664 * 8 7 6 35 35 H 1.09004 * 109.47134 * 47.00742 * 8 7 6 36 36 H 1.09004 * 109.46892 * 312.95047 * 9 7 6 37 37 H 1.08993 * 109.47510 * 72.95155 * 9 7 6 38 38 H 1.09006 * 109.47017 * 192.95338 * 9 7 6 39 39 H 1.08993 * 111.30335 * 213.49890 * 10 7 6 40 40 H 1.09006 * 111.30344 * 88.87782 * 10 7 6 41 41 H 1.07994 * 120.06107 * 359.97438 * 15 14 12 42 42 H 1.07993 * 119.94143 * 179.97438 * 16 15 14 43 43 H 1.08998 * 109.47095 * 195.00203 * 20 19 17 44 44 H 0.96704 * 114.00108 * 299.99634 * 21 20 19 45 45 H 1.08004 * 120.05991 * 179.97438 * 26 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0769 0.8475 1.4027 7 14 5.5048 2.0898 1.5887 8 6 7.1010 1.4260 0.8945 9 6 5.7074 2.6638 3.3495 10 6 4.7555 3.4413 0.4819 11 7 3.9493 2.6031 -0.4379 12 6 3.5773 3.0658 -1.6478 13 8 2.8585 2.3931 -2.3611 14 6 4.0431 4.3902 -2.1074 15 6 4.1920 5.4361 -1.1943 16 6 4.6265 6.6702 -1.6287 17 6 4.9148 6.8740 -2.9693 18 9 5.3398 8.0856 -3.3897 19 6 4.7691 5.8386 -3.8802 20 6 5.0790 6.0691 -5.3369 21 8 6.4953 6.1177 -5.5206 22 14 4.3261 7.6830 -5.8841 23 1 4.8925 8.7927 -5.0759 24 1 4.6321 7.9105 -7.3194 25 1 2.8544 7.6326 -5.6932 26 6 4.3358 4.6008 -3.4567 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5139 0.8899 30 1 3.9410 0.5556 -0.7277 31 1 4.4389 -0.1806 1.4030 32 1 3.3134 0.9988 2.1659 33 1 7.8250 2.2363 0.8091 34 1 7.4940 0.6564 1.5589 35 1 6.9182 0.9968 -0.0907 36 1 4.7339 2.9368 3.7569 37 1 6.1386 1.8601 3.9463 38 1 6.3681 3.5303 3.3754 39 1 5.5304 3.9870 -0.0563 40 1 4.1238 4.1187 1.0566 41 1 3.9664 5.2787 -0.1500 42 1 4.7416 7.4800 -0.9235 43 1 4.6634 5.2547 -5.9302 44 1 6.9329 6.8206 -5.0211 45 1 4.2222 3.7952 -4.1671 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567684_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:59 Heat of formation + Delta-G solvation = -174.640629 kcal Electronic energy + Delta-G solvation = -30550.949240 eV Core-core repulsion = 26187.007840 eV Total energy + Delta-G solvation = -4363.941401 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 355.126 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.41571 -42.06557 -40.93298 -39.61766 -37.70730 -37.47914 -36.79598 -33.51390 -32.54294 -31.31934 -29.57138 -28.79047 -28.58817 -27.93045 -26.85287 -25.64015 -24.22527 -23.30746 -22.12568 -20.47432 -19.11781 -18.85706 -18.79331 -17.98041 -17.82202 -17.61089 -17.21913 -17.02845 -16.97949 -16.09283 -15.89652 -15.44867 -15.26988 -15.09535 -14.94298 -14.92383 -14.47407 -14.35362 -14.30102 -14.20111 -14.14248 -13.99321 -13.72061 -13.65082 -13.54674 -13.50165 -13.38276 -13.04572 -12.93853 -12.72023 -12.36657 -12.07047 -11.81334 -11.63231 -11.41618 -11.25676 -11.21247 -10.91878 -10.76419 -10.63138 -10.13599 -9.89609 -9.71969 -0.44703 -0.02050 0.91556 1.11764 1.25185 1.41910 1.45173 1.46309 1.50122 1.55073 1.71459 1.91934 1.98526 2.13894 2.47332 2.96420 3.22110 3.27893 3.52632 3.52876 3.54533 3.77103 3.91965 4.01590 4.10055 4.23620 4.27122 4.32749 4.35888 4.41962 4.44970 4.47754 4.49850 4.53363 4.58100 4.61599 4.67964 4.71653 4.76595 4.86186 4.97107 5.06183 5.20099 5.22819 5.29697 5.52736 5.56624 6.04194 6.43152 6.86184 7.04545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.357 6.357 3 C 0.456 3.544 4 O -0.498 6.498 5 C 0.157 3.843 6 C -0.394 4.394 7 Si 0.999 3.001 8 C -0.441 4.441 9 C -0.440 4.440 10 C -0.195 4.195 11 N -0.581 5.581 12 C 0.572 3.428 13 O -0.522 6.522 14 C -0.133 4.133 15 C -0.061 4.061 16 C -0.154 4.154 17 C 0.114 3.886 18 F -0.124 7.124 19 C -0.157 4.157 20 C -0.079 4.079 21 O -0.532 6.532 22 Si 0.935 3.065 23 H -0.228 1.228 24 H -0.252 1.252 25 H -0.251 1.251 26 C -0.015 4.015 27 H 0.063 0.937 28 H 0.102 0.898 29 H 0.061 0.939 30 H 0.112 0.888 31 H 0.113 0.887 32 H 0.096 0.904 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.075 0.925 36 H 0.075 0.925 37 H 0.078 0.922 38 H 0.077 0.923 39 H 0.103 0.897 40 H 0.088 0.912 41 H 0.153 0.847 42 H 0.147 0.853 43 H 0.124 0.876 44 H 0.376 0.624 45 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.203 -1.012 6.054 7.439 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.273 6.273 3 C 0.297 3.703 4 O -0.384 6.384 5 C 0.052 3.948 6 C -0.479 4.479 7 Si 1.194 2.806 8 C -0.551 4.551 9 C -0.550 4.550 10 C -0.362 4.362 11 N -0.315 5.315 12 C 0.362 3.638 13 O -0.398 6.398 14 C -0.136 4.136 15 C -0.079 4.079 16 C -0.173 4.173 17 C 0.095 3.905 18 F -0.103 7.103 19 C -0.158 4.158 20 C -0.189 4.189 21 O -0.337 6.337 22 Si 0.755 3.245 23 H -0.151 1.151 24 H -0.175 1.175 25 H -0.174 1.174 26 C -0.034 4.034 27 H 0.082 0.918 28 H 0.121 0.879 29 H 0.080 0.920 30 H 0.129 0.871 31 H 0.131 0.869 32 H 0.115 0.885 33 H 0.096 0.904 34 H 0.097 0.903 35 H 0.094 0.906 36 H 0.095 0.905 37 H 0.097 0.903 38 H 0.096 0.904 39 H 0.121 0.879 40 H 0.106 0.894 41 H 0.170 0.830 42 H 0.165 0.835 43 H 0.142 0.858 44 H 0.223 0.777 45 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 3.102 -0.757 4.965 5.904 hybrid contribution -0.293 0.346 0.332 0.562 sum 2.809 -0.411 5.297 6.010 Atomic orbital electron populations 1.23274 0.76052 1.03781 1.02587 1.86471 1.23603 1.33134 1.84121 1.24057 0.92243 0.81763 0.72254 1.90656 1.66737 1.36412 1.44580 1.20182 0.88081 0.86088 1.00495 1.26801 1.14463 1.12203 0.94402 0.80505 0.67407 0.65345 0.67332 1.25960 1.14862 1.07032 1.07197 1.25942 1.05494 1.06604 1.16957 1.27472 1.00319 1.05811 1.02640 1.47491 1.53730 1.14405 1.15896 1.18159 0.79436 0.85632 0.80600 1.90828 1.35393 1.58343 1.55261 1.19789 1.05195 0.94144 0.94505 1.21741 0.94303 0.91145 1.00760 1.21146 1.03119 0.99002 0.94031 1.17912 0.98809 0.80499 0.93318 1.91588 1.87266 1.41724 1.89678 1.20266 1.04952 0.93596 0.96971 1.24965 0.87246 1.13533 0.93133 1.86559 1.17307 1.58116 1.71741 0.86144 0.80341 0.76999 0.80983 1.15080 1.17548 1.17416 1.20954 0.92505 0.95731 0.94242 0.91809 0.87925 0.91982 0.87067 0.86850 0.88520 0.90383 0.90280 0.90590 0.90544 0.90310 0.90358 0.87892 0.89370 0.82958 0.83504 0.85831 0.77712 0.83621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.05 10.56 101.05 1.07 1.12 16 2 O -0.36 -1.22 10.57 -39.27 -0.41 -1.63 16 3 C 0.46 1.90 5.75 36.00 0.21 2.11 16 4 O -0.50 -3.55 15.20 -23.71 -0.36 -3.91 16 5 C 0.16 0.09 2.56 -68.70 -0.18 -0.09 16 6 C -0.39 1.29 5.49 38.33 0.21 1.50 16 7 Si 1.00 -5.50 13.65 -169.99 -2.32 -7.82 16 8 C -0.44 2.05 8.65 101.05 0.87 2.92 16 9 C -0.44 2.25 8.65 101.05 0.87 3.13 16 10 C -0.20 0.62 3.98 60.83 0.24 0.87 16 11 N -0.58 -0.41 2.53 -106.17 -0.27 -0.68 16 12 C 0.57 2.11 6.59 -12.39 -0.08 2.03 16 13 O -0.52 -3.87 15.54 -7.73 -0.12 -3.99 16 14 C -0.13 -0.24 5.41 -104.97 -0.57 -0.81 16 15 C -0.06 0.03 7.72 -39.20 -0.30 -0.28 16 16 C -0.15 0.12 10.01 -39.57 -0.40 -0.27 16 17 C 0.11 0.06 6.62 -39.27 -0.26 -0.20 16 18 F -0.12 -0.10 12.58 2.25 0.03 -0.07 16 19 C -0.16 -0.15 4.78 -104.62 -0.50 -0.65 16 20 C -0.08 -0.04 2.81 36.01 0.10 0.07 16 21 O -0.53 -0.52 12.88 -35.23 -0.45 -0.97 16 22 Si 0.93 0.81 26.09 -169.99 -4.43 -3.63 16 23 H -0.23 -0.25 5.29 56.52 0.30 0.05 16 24 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 25 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 26 C -0.02 -0.03 9.22 -39.21 -0.36 -0.39 16 27 H 0.06 0.16 8.13 -51.93 -0.42 -0.27 16 28 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 29 H 0.06 0.06 8.13 -51.93 -0.42 -0.36 16 30 H 0.11 0.01 8.14 -51.93 -0.42 -0.42 16 31 H 0.11 -0.54 8.06 -51.93 -0.42 -0.96 16 32 H 0.10 -0.29 7.76 -51.93 -0.40 -0.69 16 33 H 0.08 -0.36 7.96 -51.93 -0.41 -0.78 16 34 H 0.08 -0.38 7.96 -51.93 -0.41 -0.80 16 35 H 0.07 -0.29 7.96 -51.93 -0.41 -0.70 16 36 H 0.08 -0.35 7.96 -51.93 -0.41 -0.77 16 37 H 0.08 -0.40 7.96 -51.93 -0.41 -0.81 16 38 H 0.08 -0.42 7.96 -51.93 -0.41 -0.83 16 39 H 0.10 -0.45 6.38 -51.93 -0.33 -0.78 16 40 H 0.09 -0.35 6.71 -51.93 -0.35 -0.70 16 41 H 0.15 -0.36 4.96 -52.49 -0.26 -0.62 16 42 H 0.15 -0.44 8.06 -52.49 -0.42 -0.87 16 43 H 0.12 -0.07 7.76 -51.93 -0.40 -0.47 16 44 H 0.38 -0.71 8.40 45.56 0.38 -0.33 16 45 H 0.15 0.18 7.94 -52.48 -0.42 -0.23 16 LS Contribution 373.70 15.07 5.63 5.63 Total: 0.00 -10.66 373.70 -7.47 -18.13 By element: Atomic # 1 Polarization: -6.40 SS G_CDS: -5.69 Total: -12.09 kcal Atomic # 6 Polarization: 10.12 SS G_CDS: 0.93 Total: 11.05 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.27 Total: -0.68 kcal Atomic # 8 Polarization: -9.17 SS G_CDS: -1.35 Total: -10.51 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.03 Total: -0.07 kcal Atomic # 14 Polarization: -4.70 SS G_CDS: -6.76 Total: -11.45 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -10.66 -7.47 -18.13 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567684_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.512 kcal (2) G-P(sol) polarization free energy of solvation -10.655 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -167.167 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.129 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds