Wall clock time and date at job start Tue Mar 9 2021 13:49:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34233 * 116.99870 * 2 1 4 4 O 1.20819 * 119.99719 * 359.97438 * 3 2 1 5 5 C 1.50695 * 119.99680 * 179.97438 * 3 2 1 6 6 C 1.55221 * 108.32724 * 287.93814 * 5 3 2 7 7 Si 1.90180 * 98.94240 * 218.37889 * 6 5 3 8 8 C 1.86296 * 111.97135 * 270.92420 * 7 6 5 9 9 C 1.86304 * 112.04430 * 144.60026 * 7 6 5 10 10 C 1.90072 * 96.40597 * 27.75038 * 7 6 5 11 11 N 1.45027 * 108.15106 * 161.45122 * 5 3 2 12 12 C 1.34768 * 120.86126 * 300.81168 * 11 5 3 13 13 O 1.21574 * 119.99838 * 3.54239 * 12 11 5 14 14 C 1.47727 * 120.00367 * 183.54558 * 12 11 5 15 15 C 1.39634 * 120.11333 * 324.55075 * 14 12 11 16 16 C 1.37858 * 119.87594 * 180.02562 * 15 14 12 17 17 C 1.38637 * 120.11762 * 0.02562 * 16 15 14 18 18 F 1.35106 * 119.87716 * 179.97438 * 17 16 15 19 19 C 1.38675 * 120.24050 * 359.95554 * 17 16 15 20 20 C 1.50703 * 119.93969 * 179.74969 * 19 17 16 21 21 O 1.42900 * 109.47105 * 74.99883 * 20 19 17 22 22 Si 1.86304 * 109.46935 * 314.99872 * 20 19 17 23 23 H 1.48505 * 109.47015 * 60.00295 * 22 20 19 24 24 H 1.48500 * 109.47165 * 179.97438 * 22 20 19 25 25 H 1.48496 * 109.47310 * 300.00272 * 22 20 19 26 26 C 1.37805 * 120.11737 * 0.02664 * 19 17 16 27 27 H 1.09001 * 109.46898 * 60.00698 * 1 2 3 28 28 H 1.09000 * 109.47251 * 179.97438 * 1 2 3 29 29 H 1.08995 * 109.47371 * 300.00356 * 1 2 3 30 30 H 1.08998 * 107.97091 * 44.64454 * 5 3 2 31 31 H 1.08994 * 111.66567 * 100.86538 * 6 5 3 32 32 H 1.09007 * 111.33769 * 335.76866 * 6 5 3 33 33 H 1.08996 * 109.47323 * 167.00570 * 8 7 6 34 34 H 1.08998 * 109.47313 * 287.00664 * 8 7 6 35 35 H 1.09004 * 109.47134 * 47.00742 * 8 7 6 36 36 H 1.09004 * 109.46892 * 312.95047 * 9 7 6 37 37 H 1.08993 * 109.47510 * 72.95155 * 9 7 6 38 38 H 1.09006 * 109.47017 * 192.95338 * 9 7 6 39 39 H 1.08993 * 111.30335 * 213.49890 * 10 7 6 40 40 H 1.09006 * 111.30344 * 88.87782 * 10 7 6 41 41 H 1.07994 * 120.06107 * 359.97438 * 15 14 12 42 42 H 1.07993 * 119.94143 * 179.97438 * 16 15 14 43 43 H 1.08998 * 109.47095 * 195.00203 * 20 19 17 44 44 H 0.96704 * 114.00108 * 299.99634 * 21 20 19 45 45 H 1.08004 * 120.05991 * 179.97438 * 26 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0769 0.8475 1.4027 7 14 5.5048 2.0898 1.5887 8 6 7.1010 1.4260 0.8945 9 6 5.7074 2.6638 3.3495 10 6 4.7555 3.4413 0.4819 11 7 3.9493 2.6031 -0.4379 12 6 3.5773 3.0658 -1.6478 13 8 2.8585 2.3931 -2.3611 14 6 4.0431 4.3902 -2.1074 15 6 4.1920 5.4361 -1.1943 16 6 4.6265 6.6702 -1.6287 17 6 4.9148 6.8740 -2.9693 18 9 5.3398 8.0856 -3.3897 19 6 4.7691 5.8386 -3.8802 20 6 5.0790 6.0691 -5.3369 21 8 6.4953 6.1177 -5.5206 22 14 4.3261 7.6830 -5.8841 23 1 4.8925 8.7927 -5.0759 24 1 4.6321 7.9105 -7.3194 25 1 2.8544 7.6326 -5.6932 26 6 4.3358 4.6008 -3.4567 27 1 -0.3633 0.5137 -0.8901 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5139 0.8899 30 1 3.9410 0.5556 -0.7277 31 1 4.4389 -0.1806 1.4030 32 1 3.3134 0.9988 2.1659 33 1 7.8250 2.2363 0.8091 34 1 7.4940 0.6564 1.5589 35 1 6.9182 0.9968 -0.0907 36 1 4.7339 2.9368 3.7569 37 1 6.1386 1.8601 3.9463 38 1 6.3681 3.5303 3.3754 39 1 5.5304 3.9870 -0.0563 40 1 4.1238 4.1187 1.0566 41 1 3.9664 5.2787 -0.1500 42 1 4.7416 7.4800 -0.9235 43 1 4.6634 5.2547 -5.9302 44 1 6.9329 6.8206 -5.0211 45 1 4.2222 3.7952 -4.1671 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567684_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:49:58 Heat of formation + Delta-G solvation = -171.791696 kcal Electronic energy + Delta-G solvation = -30550.825701 eV Core-core repulsion = 26187.007840 eV Total energy + Delta-G solvation = -4363.817862 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 355.126 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.45664 -42.23492 -41.11212 -39.72758 -37.80383 -37.67745 -37.00325 -33.53229 -32.56158 -31.31646 -29.19462 -28.67270 -28.35409 -27.80431 -26.86690 -25.63999 -24.28359 -23.34445 -22.22992 -20.58863 -19.19384 -18.98743 -18.87664 -18.12630 -17.90528 -17.74127 -17.32480 -17.23950 -17.04714 -16.14284 -15.95193 -15.50479 -15.28598 -15.12308 -14.99347 -14.92314 -14.51258 -14.32566 -14.28137 -14.03644 -13.86999 -13.72751 -13.65765 -13.57490 -13.45310 -13.15904 -13.08799 -13.07844 -12.96152 -12.67534 -12.44016 -12.18341 -11.92132 -11.90425 -11.52599 -11.30966 -10.84660 -10.77320 -10.72074 -10.61389 -10.15405 -9.97086 -9.71986 -0.50896 -0.03519 1.03531 1.05117 1.22642 1.35549 1.39398 1.43317 1.52689 1.81569 1.84857 1.89931 2.03995 2.39224 2.40353 2.93986 3.25357 3.27355 3.54752 3.56368 3.59559 3.66636 3.93434 4.01698 4.08954 4.18155 4.19468 4.31323 4.51371 4.57181 4.60006 4.70165 4.71023 4.81209 4.87479 4.88818 4.91239 4.94092 4.94721 4.96175 4.98887 5.06928 5.25314 5.34296 5.56447 5.67684 5.75219 5.97864 6.52497 6.59738 6.86870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.031 3.969 2 O -0.364 6.364 3 C 0.448 3.552 4 O -0.536 6.536 5 C 0.152 3.848 6 C -0.410 4.410 7 Si 1.100 2.900 8 C -0.456 4.456 9 C -0.448 4.448 10 C -0.228 4.228 11 N -0.576 5.576 12 C 0.562 3.438 13 O -0.575 6.575 14 C -0.148 4.148 15 C -0.054 4.054 16 C -0.145 4.145 17 C 0.108 3.892 18 F -0.125 7.125 19 C -0.161 4.161 20 C -0.077 4.077 21 O -0.544 6.544 22 Si 0.963 3.037 23 H -0.226 1.226 24 H -0.268 1.268 25 H -0.271 1.271 26 C -0.028 4.028 27 H 0.047 0.953 28 H 0.132 0.868 29 H 0.064 0.936 30 H 0.111 0.889 31 H 0.130 0.870 32 H 0.095 0.905 33 H 0.082 0.918 34 H 0.085 0.915 35 H 0.065 0.935 36 H 0.074 0.926 37 H 0.082 0.918 38 H 0.085 0.915 39 H 0.117 0.883 40 H 0.100 0.900 41 H 0.174 0.826 42 H 0.176 0.824 43 H 0.128 0.872 44 H 0.387 0.613 45 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.790 -0.565 8.187 10.043 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.279 6.279 3 C 0.291 3.709 4 O -0.425 6.425 5 C 0.046 3.954 6 C -0.491 4.491 7 Si 1.288 2.712 8 C -0.564 4.564 9 C -0.558 4.558 10 C -0.391 4.391 11 N -0.308 5.308 12 C 0.352 3.648 13 O -0.456 6.456 14 C -0.151 4.151 15 C -0.072 4.072 16 C -0.164 4.164 17 C 0.089 3.911 18 F -0.104 7.104 19 C -0.162 4.162 20 C -0.187 4.187 21 O -0.351 6.351 22 Si 0.786 3.214 23 H -0.149 1.149 24 H -0.193 1.193 25 H -0.195 1.195 26 C -0.047 4.047 27 H 0.066 0.934 28 H 0.150 0.850 29 H 0.083 0.917 30 H 0.129 0.871 31 H 0.149 0.851 32 H 0.114 0.886 33 H 0.101 0.899 34 H 0.104 0.896 35 H 0.084 0.916 36 H 0.093 0.907 37 H 0.101 0.899 38 H 0.104 0.896 39 H 0.135 0.865 40 H 0.118 0.882 41 H 0.191 0.809 42 H 0.193 0.807 43 H 0.146 0.854 44 H 0.236 0.764 45 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 4.704 -0.309 7.121 8.540 hybrid contribution -0.809 0.189 -0.324 0.892 sum 3.895 -0.119 6.797 7.835 Atomic orbital electron populations 1.23463 0.75281 1.05550 1.01930 1.86475 1.24578 1.33038 1.83825 1.24916 0.93711 0.81323 0.70920 1.90620 1.67829 1.37476 1.46573 1.20538 0.85746 0.86231 1.02844 1.27186 1.15797 1.14461 0.91633 0.79137 0.64604 0.61671 0.65761 1.26138 1.15854 1.07506 1.06934 1.26028 1.05680 1.07170 1.16913 1.28110 1.00615 1.07449 1.02884 1.47644 1.52836 1.14831 1.15448 1.18599 0.78928 0.86023 0.81206 1.90784 1.37923 1.59867 1.56985 1.19819 1.06170 0.94076 0.95013 1.21965 0.93337 0.90517 1.01348 1.21445 1.01652 0.99429 0.93849 1.18059 0.98925 0.80256 0.93894 1.91580 1.87298 1.41711 1.89786 1.20272 1.05160 0.93538 0.97263 1.24945 0.87130 1.13452 0.93165 1.86530 1.17473 1.58884 1.72170 0.85774 0.78770 0.77146 0.79709 1.14889 1.19297 1.19533 1.20959 0.93309 0.95998 0.94410 0.93440 0.84957 0.91687 0.87126 0.85132 0.88628 0.89916 0.89635 0.91577 0.90727 0.89858 0.89554 0.86512 0.88182 0.80924 0.80666 0.85373 0.76367 0.84366 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.13 10.56 113.37 1.20 1.33 16 2 O -0.36 -3.07 10.57 -51.45 -0.54 -3.61 16 3 C 0.45 4.59 5.75 71.23 0.41 5.00 16 4 O -0.54 -8.93 15.20 26.74 0.41 -8.53 16 5 C 0.15 0.32 2.56 45.28 0.12 0.43 16 6 C -0.41 2.90 5.49 72.74 0.40 3.30 16 7 Si 1.10 -13.97 13.65 68.60 0.94 -13.03 16 8 C -0.46 4.94 8.65 113.37 0.98 5.92 16 9 C -0.45 5.69 8.65 113.37 0.98 6.67 16 10 C -0.23 1.67 3.98 127.43 0.51 2.18 16 11 N -0.58 -1.28 2.53 -608.09 -1.54 -2.82 16 12 C 0.56 5.26 6.59 86.75 0.57 5.83 16 13 O -0.58 -10.47 15.54 8.51 0.13 -10.33 16 14 C -0.15 -0.70 5.41 -20.09 -0.11 -0.81 16 15 C -0.05 0.08 7.72 22.52 0.17 0.25 16 16 C -0.15 0.43 10.01 22.27 0.22 0.65 16 17 C 0.11 0.07 6.62 22.47 0.15 0.22 16 18 F -0.13 -0.12 12.58 44.97 0.57 0.45 16 19 C -0.16 -0.43 4.78 -19.86 -0.09 -0.52 16 20 C -0.08 -0.14 2.81 71.24 0.20 0.06 16 21 O -0.54 -1.26 12.88 -148.98 -1.92 -3.18 16 22 Si 0.96 2.46 26.09 68.60 1.79 4.25 16 23 H -0.23 -0.47 5.29 99.48 0.53 0.05 16 24 H -0.27 -1.35 7.11 99.48 0.71 -0.65 16 25 H -0.27 -1.53 7.11 99.48 0.71 -0.83 16 26 C -0.03 -0.14 9.22 22.51 0.21 0.07 16 27 H 0.05 0.35 8.13 -2.39 -0.02 0.33 16 28 H 0.13 -0.33 8.14 -2.39 -0.02 -0.35 16 29 H 0.06 0.22 8.13 -2.39 -0.02 0.20 16 30 H 0.11 0.19 8.14 -2.39 -0.02 0.17 16 31 H 0.13 -1.40 8.06 -2.39 -0.02 -1.42 16 32 H 0.09 -0.61 7.76 -2.38 -0.02 -0.63 16 33 H 0.08 -0.93 7.96 -2.39 -0.02 -0.95 16 34 H 0.08 -0.99 7.96 -2.39 -0.02 -1.01 16 35 H 0.07 -0.54 7.96 -2.38 -0.02 -0.56 16 36 H 0.07 -0.85 7.96 -2.39 -0.02 -0.87 16 37 H 0.08 -1.06 7.96 -2.39 -0.02 -1.08 16 38 H 0.09 -1.17 7.96 -2.38 -0.02 -1.19 16 39 H 0.12 -1.18 6.38 -2.39 -0.02 -1.19 16 40 H 0.10 -0.95 6.71 -2.38 -0.02 -0.96 16 41 H 0.17 -1.05 4.96 -2.91 -0.01 -1.06 16 42 H 0.18 -1.54 8.06 -2.91 -0.02 -1.56 16 43 H 0.13 0.04 7.76 -2.39 -0.02 0.02 16 44 H 0.39 -1.46 8.40 -74.05 -0.62 -2.08 16 45 H 0.14 0.77 7.94 -2.91 -0.02 0.74 16 Total: 0.00 -27.82 373.70 6.72 -21.10 By element: Atomic # 1 Polarization: -15.84 SS G_CDS: 0.98 Total: -14.86 kcal Atomic # 6 Polarization: 24.66 SS G_CDS: 5.91 Total: 30.57 kcal Atomic # 7 Polarization: -1.28 SS G_CDS: -1.54 Total: -2.82 kcal Atomic # 8 Polarization: -23.73 SS G_CDS: -1.92 Total: -25.66 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 0.57 Total: 0.45 kcal Atomic # 14 Polarization: -11.51 SS G_CDS: 2.73 Total: -8.78 kcal Total: -27.82 6.72 -21.10 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567684_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.692 kcal (2) G-P(sol) polarization free energy of solvation -27.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -178.514 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 6.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds