Wall clock time and date at job start Tue Mar 9 2021 15:00:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35998 * 116.99922 * 2 1 4 4 C 1.39151 * 120.07756 * 179.97438 * 3 2 1 5 5 O 1.35997 * 120.07031 * 359.97438 * 4 3 2 6 6 C 1.42897 * 117.00292 * 179.72761 * 5 4 3 7 7 C 1.50703 * 109.47196 * 179.97438 * 6 5 4 8 8 O 1.21274 * 120.00019 * 0.02562 * 7 6 5 9 9 N 1.34778 * 119.99605 * 179.97438 * 7 6 5 10 10 C 1.46508 * 119.99573 * 179.97438 * 9 7 6 11 11 H 1.08996 * 112.85068 * 336.20548 * 10 9 7 12 12 C 1.53782 * 113.68519 * 107.46782 * 10 9 7 13 13 C 1.53782 * 87.07859 * 89.12884 * 12 10 9 14 14 H 1.09000 * 113.68767 * 270.86497 * 13 12 10 15 15 C 1.53005 * 113.61559 * 139.97940 * 13 12 10 16 16 N 1.46500 * 109.47040 * 87.49830 * 15 13 12 17 17 C 1.35312 * 125.86582 * 124.99824 * 16 15 13 18 18 C 1.35359 * 106.17441 * 179.77310 * 17 16 15 19 19 N 1.33772 * 106.49554 * 0.22938 * 18 17 16 20 20 N 1.28640 * 108.88426 * 359.97438 * 19 18 17 21 21 C 1.53773 * 113.61203 * 205.00208 * 10 9 7 22 22 C 1.38564 * 119.85788 * 179.72974 * 4 3 2 23 23 C 1.38243 * 119.99778 * 0.27210 * 22 4 3 24 24 N 1.48004 * 119.92171 * 180.02562 * 23 22 4 25 25 O 1.21798 * 120.00472 * 0.02562 * 24 23 22 26 26 O 1.21805 * 119.99481 * 180.02562 * 24 23 22 27 27 C 1.38249 * 120.14656 * 0.02737 * 23 22 4 28 28 C 1.50701 * 119.92518 * 180.02562 * 27 23 22 29 29 O 1.42896 * 109.47458 * 74.99605 * 28 27 23 30 30 Si 1.86300 * 109.46861 * 194.99448 * 28 27 23 31 31 C 1.38243 * 120.14920 * 359.97046 * 27 23 22 32 32 H 1.08991 * 109.47264 * 300.00028 * 1 2 3 33 33 H 1.09005 * 109.46921 * 59.99878 * 1 2 3 34 34 H 1.08998 * 109.46983 * 179.97438 * 1 2 3 35 35 H 1.09000 * 109.47010 * 59.99982 * 6 5 4 36 36 H 1.08997 * 109.47126 * 300.00085 * 6 5 4 37 37 H 0.96999 * 120.00578 * 0.02562 * 9 7 6 38 38 H 1.08998 * 113.61566 * 334.57865 * 12 10 9 39 39 H 1.08999 * 113.61259 * 203.67075 * 12 10 9 40 40 H 1.08994 * 109.47014 * 327.50167 * 15 13 12 41 41 H 1.08995 * 109.47162 * 207.50285 * 15 13 12 42 42 H 1.08002 * 126.91567 * 0.04325 * 17 16 15 43 43 H 1.07994 * 126.74727 * 180.21281 * 18 17 16 44 44 H 1.08999 * 113.61451 * 156.25541 * 21 10 9 45 45 H 1.08994 * 113.61897 * 25.35201 * 21 10 9 46 46 H 1.08001 * 119.99773 * 180.29833 * 22 4 3 47 47 H 1.09000 * 109.47067 * 314.99413 * 28 27 23 48 48 H 0.96706 * 114.00008 * 59.99958 * 29 28 27 49 49 H 1.48510 * 109.99957 * 58.68307 * 30 28 27 50 50 H 1.48505 * 109.99700 * 179.97438 * 30 28 27 51 51 H 1.07997 * 120.00313 * 180.02562 * 31 27 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 3.4359 1.2865 0.0005 5 8 4.1795 0.1478 0.0016 6 6 5.6003 0.3008 -0.0040 7 6 6.2519 -1.0581 -0.0012 8 8 5.5670 -2.0589 0.0044 9 7 7.5957 -1.1610 -0.0061 10 6 8.2292 -2.4820 -0.0029 11 1 7.5851 -3.2593 0.4083 12 6 8.8721 -2.8621 -1.3471 13 6 10.1553 -2.1870 -0.8346 14 1 10.2125 -1.1232 -1.0653 15 6 11.4339 -2.9437 -1.1999 16 7 11.8995 -2.5077 -2.5188 17 6 13.1301 -2.0233 -2.8049 18 6 13.1297 -1.7521 -4.1310 19 7 11.9132 -2.0747 -4.5843 20 7 11.2074 -2.5169 -3.6039 21 6 9.6492 -2.4827 0.5871 22 6 4.0602 2.5235 -0.0051 23 6 3.3028 3.6800 -0.0056 24 7 3.9714 5.0004 -0.0123 25 8 5.1875 5.0673 -0.0177 26 8 3.3053 6.0202 -0.0122 27 6 1.9223 3.6058 0.0001 28 6 1.1015 4.8697 -0.0010 29 8 1.1294 5.4546 -1.3045 30 14 -0.6578 4.4679 0.4618 31 6 1.2931 2.3749 0.0057 32 1 -0.3633 0.5138 0.8899 33 1 -0.3633 0.5139 -0.8900 34 1 -0.3633 -1.0276 -0.0005 35 1 5.9097 0.8535 0.8831 36 1 5.9033 0.8477 -0.8968 37 1 8.1435 -0.3605 -0.0110 38 1 8.4250 -2.3571 -2.2033 39 1 8.9734 -3.9374 -1.4941 40 1 11.2288 -4.0139 -1.2227 41 1 12.2035 -2.7370 -0.4563 42 1 13.9495 -1.8854 -2.1149 43 1 13.9501 -1.3534 -4.7092 44 1 9.9630 -3.4543 0.9688 45 1 9.8296 -1.6715 1.2923 46 1 5.1385 2.5841 -0.0096 47 1 1.5159 5.5726 0.7216 48 1 0.7747 4.8835 -1.9996 49 1 -0.6973 3.8299 1.8023 50 1 -1.4775 5.7062 0.4649 51 1 0.2146 2.3197 0.0098 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_4549636.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:00:47 Heat of formation + Delta-G solvation = 42.898517 kcal Electronic energy + Delta-G solvation = -40100.266559 eV Core-core repulsion = 34589.522136 eV Total energy + Delta-G solvation = -5510.744423 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.161 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -44.17902 -43.24991 -42.15203 -41.53630 -40.31550 -39.40650 -39.09628 -37.56846 -37.08303 -35.88721 -34.34143 -32.72210 -32.58330 -31.96014 -30.46349 -29.33623 -28.90837 -27.87660 -27.02088 -25.89350 -24.97006 -23.93886 -23.56140 -23.21395 -22.43387 -22.20201 -20.80824 -20.57394 -19.71698 -19.58905 -18.93470 -18.64666 -18.49460 -18.33400 -17.87065 -17.78452 -17.46460 -17.33612 -17.10264 -16.98262 -16.50051 -16.15320 -16.13887 -15.98314 -15.78329 -15.52293 -15.37735 -15.22025 -15.11263 -14.82514 -14.42753 -14.23674 -13.99982 -13.95711 -13.73950 -13.55068 -13.29969 -13.15622 -12.76031 -12.71908 -12.60277 -12.54520 -12.51230 -12.29064 -12.21023 -12.00226 -11.95418 -11.84289 -11.68148 -11.55806 -11.09797 -11.04513 -10.59293 -10.54240 -10.33576 -10.32741 -9.55267 -5.28072 -1.23877 -0.52677 0.30656 0.42034 0.63616 1.02109 1.07139 1.28827 1.31922 1.43413 1.67560 1.70102 1.81978 1.85088 2.15527 2.89101 2.98638 3.05911 3.12431 3.17692 3.29412 3.30209 3.36841 3.42459 3.44437 3.53684 3.60916 3.67500 3.76878 3.78462 3.82270 3.84156 3.93702 3.95844 4.04766 4.11056 4.14934 4.23621 4.28659 4.35680 4.37630 4.43436 4.52686 4.53773 4.63309 4.65375 4.74301 4.82357 4.90647 5.21614 5.27218 5.42222 5.46371 5.57926 5.89925 6.14669 6.43487 6.77161 6.91710 7.58398 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.284 6.284 3 C 0.171 3.829 4 C 0.109 3.891 5 O -0.264 6.264 6 C 0.032 3.968 7 C 0.522 3.478 8 O -0.504 6.504 9 N -0.710 5.710 10 C 0.121 3.879 11 H 0.111 0.889 12 C -0.138 4.138 13 C -0.126 4.126 14 H 0.099 0.901 15 C 0.123 3.877 16 N -0.291 5.291 17 C -0.054 4.054 18 C -0.051 4.051 19 N -0.273 5.273 20 N -0.079 5.079 21 C -0.134 4.134 22 C -0.118 4.118 23 C -0.025 4.025 24 N 0.032 4.968 25 O -0.174 6.174 26 O -0.129 6.129 27 C -0.042 4.042 28 C -0.074 4.074 29 O -0.515 6.515 30 Si 0.675 3.325 31 C -0.177 4.177 32 H 0.064 0.936 33 H 0.068 0.932 34 H 0.114 0.886 35 H 0.100 0.900 36 H 0.101 0.899 37 H 0.403 0.597 38 H 0.080 0.920 39 H 0.098 0.902 40 H 0.103 0.897 41 H 0.109 0.891 42 H 0.190 0.810 43 H 0.190 0.810 44 H 0.104 0.896 45 H 0.082 0.918 46 H 0.166 0.834 47 H 0.139 0.861 48 H 0.374 0.626 49 H -0.252 1.252 50 H -0.242 1.242 51 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.188 -3.782 3.904 5.564 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 O -0.195 6.195 3 C 0.123 3.877 4 C 0.062 3.938 5 O -0.176 6.176 6 C -0.047 4.047 7 C 0.306 3.694 8 O -0.377 6.377 9 N -0.364 5.364 10 C 0.016 3.984 11 H 0.129 0.871 12 C -0.177 4.177 13 C -0.145 4.145 14 H 0.117 0.883 15 C 0.002 3.998 16 N -0.085 5.085 17 C -0.204 4.204 18 C -0.208 4.208 19 N -0.139 5.139 20 N -0.059 5.059 21 C -0.172 4.172 22 C -0.138 4.138 23 C -0.109 4.109 24 N 0.551 4.449 25 O -0.385 6.385 26 O -0.349 6.349 27 C -0.045 4.045 28 C -0.184 4.184 29 O -0.319 6.319 30 Si 0.574 3.426 31 C -0.195 4.195 32 H 0.083 0.917 33 H 0.087 0.913 34 H 0.132 0.868 35 H 0.118 0.882 36 H 0.119 0.881 37 H 0.238 0.762 38 H 0.099 0.901 39 H 0.116 0.884 40 H 0.122 0.878 41 H 0.127 0.873 42 H 0.207 0.793 43 H 0.207 0.793 44 H 0.123 0.877 45 H 0.101 0.899 46 H 0.183 0.817 47 H 0.156 0.844 48 H 0.220 0.780 49 H -0.176 1.176 50 H -0.166 1.166 51 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges -1.372 -5.311 4.199 6.908 hybrid contribution 2.384 1.482 0.785 2.915 sum 1.012 -3.829 4.984 6.366 Atomic orbital electron populations 1.23422 0.76779 1.05801 1.02181 1.86347 1.22509 1.24200 1.86482 1.18447 0.89023 0.85911 0.94355 1.17844 0.88420 0.85299 1.02266 1.86332 1.16758 1.26051 1.88449 1.22644 0.80323 0.97082 1.04664 1.19824 0.82460 0.90214 0.76855 1.90812 1.62491 1.37797 1.46575 1.45444 1.05757 1.09090 1.76106 1.21839 0.93739 0.85382 0.97427 0.87114 1.23486 0.94473 1.01835 0.97870 1.22959 0.93316 1.00683 0.97575 0.88315 1.22233 0.98141 1.00844 0.78592 1.47539 1.09496 1.41400 1.10044 1.23751 0.90898 1.06534 0.99261 1.23693 0.97698 1.06352 0.93071 1.75181 1.03540 1.13518 1.21661 1.78350 1.20389 1.18966 0.88213 1.23348 0.94532 1.04037 0.95327 1.20799 1.02181 0.88988 1.01813 1.20395 0.91983 0.83135 1.15401 1.43382 1.00983 1.02622 0.97919 1.94540 0.95801 1.93721 1.54397 1.94577 1.64436 1.24076 1.51846 1.20103 0.91598 0.97071 0.95692 1.25471 1.08471 0.93293 0.91197 1.86713 1.86517 1.43429 1.15224 0.95569 0.76380 0.85282 0.85322 1.20904 1.00513 0.89587 1.08546 0.91735 0.91346 0.86752 0.88215 0.88143 0.76201 0.90095 0.88388 0.87843 0.87269 0.79275 0.79325 0.87719 0.89927 0.81673 0.84408 0.77954 1.17647 1.16573 0.82000 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.28 -0.05 10.28 -34.23 -0.35 -0.40 16 3 C 0.17 -0.02 6.70 -39.12 -0.26 -0.28 16 4 C 0.11 0.05 6.70 -39.12 -0.26 -0.21 16 5 O -0.26 -0.42 9.45 -47.36 -0.45 -0.86 16 6 C 0.03 -0.06 5.22 36.01 0.19 0.13 16 7 C 0.52 0.14 7.91 -10.98 -0.09 0.06 16 8 O -0.50 -2.61 16.10 -14.35 -0.23 -2.84 16 9 N -0.71 2.00 5.27 -53.02 -0.28 1.72 16 10 C 0.12 -0.33 4.32 -67.12 -0.29 -0.62 16 11 H 0.11 -0.10 7.46 -51.93 -0.39 -0.49 16 12 C -0.14 0.31 7.43 -25.92 -0.19 0.12 16 13 C -0.13 0.54 3.64 -89.81 -0.33 0.22 16 14 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 15 C 0.12 -0.54 6.29 -4.04 -0.03 -0.56 16 16 N -0.29 0.15 3.44 -61.26 -0.21 -0.06 16 17 C -0.05 0.08 11.57 -17.04 -0.20 -0.12 16 18 C -0.05 -0.04 12.05 -17.73 -0.21 -0.26 16 19 N -0.27 -1.24 12.41 30.24 0.38 -0.87 16 20 N -0.08 -0.26 12.93 60.35 0.78 0.52 16 21 C -0.13 0.73 7.39 -25.93 -0.19 0.54 16 22 C -0.12 0.00 8.54 -39.46 -0.34 -0.33 16 23 C -0.03 -0.04 6.85 -79.95 -0.55 -0.59 16 24 N 0.03 0.14 4.45 33.96 0.15 0.29 16 25 O -0.17 -0.86 18.44 -29.46 -0.54 -1.40 16 26 O -0.13 -0.71 14.62 -35.96 -0.53 -1.24 16 27 C -0.04 0.00 5.26 -104.62 -0.55 -0.55 16 28 C -0.07 0.00 1.74 36.01 0.06 0.07 16 29 O -0.52 -0.24 11.80 -55.45 -0.65 -0.89 16 30 Si 0.67 -1.45 29.91 -169.99 -5.08 -6.53 16 31 C -0.18 0.34 7.65 -39.46 -0.30 0.04 16 32 H 0.06 -0.35 7.65 -51.93 -0.40 -0.74 16 33 H 0.07 -0.42 7.68 -51.93 -0.40 -0.82 16 34 H 0.11 -0.59 8.14 -51.93 -0.42 -1.01 16 35 H 0.10 -0.45 7.66 -51.93 -0.40 -0.85 16 36 H 0.10 -0.42 7.66 -51.93 -0.40 -0.81 16 37 H 0.40 -2.26 8.70 -40.82 -0.36 -2.61 16 38 H 0.08 0.01 8.14 -51.93 -0.42 -0.42 16 39 H 0.10 -0.24 7.90 -51.93 -0.41 -0.65 16 40 H 0.10 -0.51 7.84 -51.93 -0.41 -0.92 16 41 H 0.11 -0.77 8.07 -51.93 -0.42 -1.19 16 42 H 0.19 -1.03 8.06 -52.49 -0.42 -1.45 16 43 H 0.19 -0.38 8.06 -52.49 -0.42 -0.80 16 44 H 0.10 -0.68 8.10 -51.93 -0.42 -1.10 16 45 H 0.08 -0.50 8.14 -51.93 -0.42 -0.92 16 46 H 0.17 -0.33 5.85 -52.49 -0.31 -0.64 16 47 H 0.14 0.23 6.07 -51.93 -0.32 -0.09 16 48 H 0.37 -1.52 8.70 45.56 0.40 -1.12 16 49 H -0.25 0.04 7.11 56.52 0.40 0.45 16 50 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 51 H 0.16 -0.80 3.36 -52.49 -0.18 -0.98 16 LS Contribution 433.78 15.07 6.54 6.54 Total: 0.00 -16.16 433.78 -9.15 -25.31 By element: Atomic # 1 Polarization: -11.73 SS G_CDS: -6.13 Total: -17.85 kcal Atomic # 6 Polarization: 1.13 SS G_CDS: -2.54 Total: -1.41 kcal Atomic # 7 Polarization: 0.78 SS G_CDS: 0.82 Total: 1.59 kcal Atomic # 8 Polarization: -4.89 SS G_CDS: -2.75 Total: -7.64 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.08 Total: -6.53 kcal Total LS contribution 6.54 Total: 6.54 kcal Total: -16.16 -9.15 -25.31 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_4549636.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.211 kcal (2) G-P(sol) polarization free energy of solvation -16.158 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.154 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.312 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds