Wall clock time and date at job start Tue Mar 9 2021 15:01:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.36000 * 117.00109 * 2 1 4 4 C 1.39149 * 120.07371 * 179.97438 * 3 2 1 5 5 O 1.35996 * 120.07631 * 359.97438 * 4 3 2 6 6 C 1.42900 * 117.00224 * 179.97438 * 5 4 3 7 7 C 1.50696 * 109.46972 * 180.02562 * 6 5 4 8 8 O 1.21286 * 120.00282 * 0.02562 * 7 6 5 9 9 N 1.34774 * 119.99763 * 180.02562 * 7 6 5 10 10 C 1.46506 * 119.99952 * 179.97438 * 9 7 6 11 11 H 1.09002 * 112.84852 * 25.33640 * 10 9 7 12 12 C 1.53781 * 113.61361 * 156.53041 * 10 9 7 13 13 C 1.53781 * 87.08070 * 89.11956 * 12 10 9 14 14 H 1.08998 * 113.61172 * 270.88476 * 13 12 10 15 15 C 1.52993 * 113.61492 * 140.06794 * 13 12 10 16 16 N 1.46501 * 109.47405 * 174.99701 * 15 13 12 17 17 C 1.35309 * 125.86844 * 124.99441 * 16 15 13 18 18 C 1.35347 * 106.17572 * 180.02562 * 17 16 15 19 19 N 1.33771 * 106.49843 * 0.02562 * 18 17 16 20 20 N 1.28633 * 108.88077 * 359.73347 * 19 18 17 21 21 C 1.53773 * 113.61686 * 254.13880 * 10 9 7 22 22 C 1.38570 * 119.85061 * 180.25136 * 4 3 2 23 23 C 1.38241 * 120.00020 * 359.43341 * 22 4 3 24 24 C 1.38249 * 120.14506 * 0.59271 * 23 22 4 25 25 C 1.50699 * 119.92672 * 179.70579 * 24 23 22 26 26 O 1.42898 * 109.47041 * 244.97661 * 25 24 23 27 27 Si 1.86298 * 109.47050 * 4.97669 * 25 24 23 28 28 C 1.38243 * 120.14844 * 359.68131 * 24 23 22 29 29 H 1.08997 * 109.47142 * 59.99666 * 1 2 3 30 30 H 1.08996 * 109.46850 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47135 * 299.99811 * 1 2 3 32 32 H 1.09001 * 109.46945 * 59.99851 * 6 5 4 33 33 H 1.09002 * 109.46785 * 300.00337 * 6 5 4 34 34 H 0.96997 * 120.00341 * 359.97438 * 9 7 6 35 35 H 1.09001 * 113.61158 * 203.66864 * 12 10 9 36 36 H 1.08998 * 113.61196 * 334.56885 * 12 10 9 37 37 H 1.09002 * 109.46900 * 294.99582 * 15 13 12 38 38 H 1.08998 * 109.47474 * 54.99773 * 15 13 12 39 39 H 1.07999 * 126.91273 * 359.97438 * 17 16 15 40 40 H 1.08012 * 126.75060 * 180.02562 * 18 17 16 41 41 H 1.09007 * 113.61678 * 25.42910 * 21 10 9 42 42 H 1.09000 * 113.61916 * 156.33583 * 21 10 9 43 43 H 1.08005 * 119.99591 * 179.71732 * 22 4 3 44 44 H 1.07999 * 119.92813 * 180.29662 * 23 22 4 45 45 H 1.09000 * 109.47186 * 124.97689 * 25 24 23 46 46 H 0.96707 * 113.99890 * 179.97438 * 26 25 24 47 47 H 1.48499 * 110.00173 * 299.99830 * 27 25 24 48 48 H 1.48493 * 110.00172 * 61.32015 * 27 25 24 49 49 H 1.08003 * 120.00184 * 180.02562 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2118 0.0000 4 6 3.4360 1.2863 0.0005 5 8 4.1796 0.1477 0.0016 6 6 5.6004 0.3007 0.0015 7 6 6.2519 -1.0581 0.0021 8 8 5.5670 -2.0591 0.0021 9 7 7.5957 -1.1611 0.0027 10 6 8.2292 -2.4821 0.0039 11 1 7.5937 -3.2566 -0.4257 12 6 9.6611 -2.4791 -0.5568 13 6 10.1376 -2.1906 0.8766 14 1 10.1881 -1.1281 1.1144 15 6 11.4100 -2.9470 1.2634 16 7 11.8480 -2.5177 2.5939 17 6 12.0749 -3.3279 3.6536 18 6 12.4595 -2.5208 4.6697 19 7 12.4487 -1.2727 4.1885 20 7 12.0871 -1.3055 2.9544 21 6 8.8422 -2.8701 1.3597 22 6 4.0603 2.5234 0.0058 23 6 3.3029 3.6799 -0.0013 24 6 1.9224 3.6058 -0.0013 25 6 1.1016 4.8696 -0.0024 26 8 0.3642 4.9597 1.2183 27 14 2.2309 6.3433 -0.1559 28 6 1.2932 2.3748 -0.0009 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 5.9065 0.8513 0.8910 33 1 5.9066 0.8498 -0.8889 34 1 8.1435 -0.3606 0.0023 35 1 9.9831 -3.4485 -0.9371 36 1 9.8553 -1.6640 -1.2539 37 1 11.2065 -4.0178 1.2758 38 1 12.1941 -2.7346 0.5367 39 1 11.9694 -4.4023 3.6829 40 1 12.7233 -2.8247 5.6721 41 1 8.3759 -2.3705 2.2088 42 1 8.9408 -3.9463 1.5024 43 1 5.1386 2.5840 0.0109 44 1 3.7907 4.6434 -0.0020 45 1 0.4097 4.8528 -0.8445 46 1 -0.1877 5.7509 1.2869 47 1 3.1792 6.3777 0.9863 48 1 2.9802 6.2779 -1.4363 49 1 0.2146 2.3197 -0.0013 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567714_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:01:13 Heat of formation + Delta-G solvation = 34.760850 kcal Electronic energy + Delta-G solvation = -33062.562711 eV Core-core repulsion = 28382.481847 eV Total energy + Delta-G solvation = -4680.080863 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -44.17471 -41.85379 -41.37885 -40.00177 -39.02760 -38.69927 -37.02886 -35.85131 -34.26741 -32.16084 -31.96337 -31.49840 -30.25336 -29.07885 -28.41307 -27.05925 -26.18392 -24.97055 -23.74016 -23.52208 -22.55079 -22.37015 -21.88192 -20.49415 -19.73253 -18.84060 -18.52526 -18.29081 -18.17631 -17.72096 -17.49846 -17.37682 -17.07318 -16.57061 -16.28316 -16.19494 -15.89446 -15.77034 -15.64857 -15.54793 -15.26164 -15.12117 -14.88310 -14.43142 -14.24779 -14.14576 -14.03739 -13.81865 -13.59029 -13.50819 -13.15278 -12.80503 -12.79133 -12.47065 -12.36999 -12.25728 -12.19513 -12.00359 -11.95459 -11.84011 -11.82280 -11.71182 -10.99096 -10.93481 -10.36978 -10.33355 -10.26700 -9.79028 -8.86482 -5.00406 0.16413 0.27008 0.64561 1.24097 1.31220 1.35691 1.42554 1.60916 1.67956 1.93567 2.30383 2.45686 2.52769 3.03031 3.11731 3.24593 3.33490 3.40485 3.48620 3.54622 3.67888 3.71109 3.72311 3.81809 3.86956 3.88761 3.90092 4.07920 4.13443 4.13993 4.21507 4.27628 4.29350 4.29933 4.37580 4.38580 4.42269 4.54197 4.57760 4.59951 4.64488 4.74548 4.79148 4.87770 4.96433 5.05911 5.22872 5.32191 5.36377 5.52334 5.58424 5.93592 6.23835 6.52467 6.58328 7.03034 7.58011 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.301 6.301 3 C 0.109 3.891 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.520 3.480 8 O -0.505 6.505 9 N -0.713 5.713 10 C 0.125 3.875 11 H 0.110 0.890 12 C -0.133 4.133 13 C -0.128 4.128 14 H 0.109 0.891 15 C 0.124 3.876 16 N -0.289 5.289 17 C -0.051 4.051 18 C -0.051 4.051 19 N -0.272 5.272 20 N -0.086 5.086 21 C -0.149 4.149 22 C -0.167 4.167 23 C -0.120 4.120 24 C -0.070 4.070 25 C -0.070 4.070 26 O -0.545 6.545 27 Si 0.684 3.316 28 C -0.143 4.143 29 H 0.056 0.944 30 H 0.104 0.896 31 H 0.057 0.943 32 H 0.095 0.905 33 H 0.095 0.905 34 H 0.404 0.596 35 H 0.104 0.896 36 H 0.084 0.916 37 H 0.109 0.891 38 H 0.103 0.897 39 H 0.190 0.810 40 H 0.190 0.810 41 H 0.075 0.925 42 H 0.096 0.904 43 H 0.139 0.861 44 H 0.124 0.876 45 H 0.074 0.926 46 H 0.382 0.618 47 H -0.250 1.250 48 H -0.254 1.254 49 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.199 1.044 -3.449 3.609 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.214 6.214 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.188 6.188 6 C -0.041 4.041 7 C 0.305 3.695 8 O -0.378 6.378 9 N -0.367 5.367 10 C 0.020 3.980 11 H 0.128 0.872 12 C -0.172 4.172 13 C -0.147 4.147 14 H 0.127 0.873 15 C 0.003 3.997 16 N -0.082 5.082 17 C -0.201 4.201 18 C -0.209 4.209 19 N -0.138 5.138 20 N -0.066 5.066 21 C -0.187 4.187 22 C -0.186 4.186 23 C -0.138 4.138 24 C -0.070 4.070 25 C -0.180 4.180 26 O -0.352 6.352 27 Si 0.585 3.415 28 C -0.161 4.161 29 H 0.075 0.925 30 H 0.122 0.878 31 H 0.076 0.924 32 H 0.113 0.887 33 H 0.113 0.887 34 H 0.238 0.762 35 H 0.122 0.878 36 H 0.102 0.898 37 H 0.127 0.873 38 H 0.121 0.879 39 H 0.207 0.793 40 H 0.207 0.793 41 H 0.094 0.906 42 H 0.115 0.885 43 H 0.157 0.843 44 H 0.141 0.859 45 H 0.092 0.908 46 H 0.230 0.770 47 H -0.175 1.175 48 H -0.179 1.179 49 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges 0.441 1.080 -3.883 4.055 hybrid contribution 0.173 -1.112 0.279 1.160 sum 0.614 -0.033 -3.604 3.656 Atomic orbital electron populations 1.23142 0.78081 1.04444 1.01404 1.86248 1.21390 1.25199 1.88543 1.18241 0.88939 0.85559 1.00926 1.18225 0.88328 0.85615 1.02017 1.86269 1.15932 1.27662 1.88934 1.22468 0.81408 0.96146 1.04082 1.20008 0.82294 0.90600 0.76598 1.90800 1.62533 1.37967 1.46507 1.45472 1.05901 1.08907 1.76393 1.21751 0.93747 0.85644 0.96863 0.87215 1.23333 0.94358 1.04084 0.95399 1.23085 0.92592 1.01486 0.97554 0.87313 1.22230 0.97920 1.00468 0.79119 1.47498 1.43163 1.05843 1.11736 1.23732 1.08434 0.99970 0.88005 1.23686 1.06348 0.89315 1.01522 1.75156 1.15903 1.21490 1.01203 1.78270 1.17387 1.01935 1.09043 1.23617 0.95294 1.01490 0.98320 1.20936 1.00392 0.90631 1.06645 1.20564 0.93033 0.97629 1.02538 1.19030 0.92730 0.93491 1.01747 1.24658 1.00780 1.02746 0.89824 1.86502 1.63242 1.48457 1.36978 0.95319 0.81221 0.84384 0.80528 1.20922 1.00421 0.90248 1.04555 0.92550 0.87807 0.92402 0.88740 0.88703 0.76169 0.87776 0.89764 0.87261 0.87874 0.79272 0.79305 0.90646 0.88550 0.84321 0.85863 0.90776 0.76996 1.17463 1.17914 0.83990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.54 10.28 -34.24 -0.35 -1.89 16 3 C 0.11 0.51 6.70 -39.12 -0.26 0.25 16 4 C 0.10 0.44 6.70 -39.12 -0.26 0.18 16 5 O -0.28 -1.36 9.45 -47.35 -0.45 -1.81 16 6 C 0.04 0.01 5.22 36.00 0.19 0.20 16 7 C 0.52 1.04 7.91 -10.99 -0.09 0.95 16 8 O -0.51 -3.53 16.12 -14.36 -0.23 -3.77 16 9 N -0.71 1.13 5.26 -53.02 -0.28 0.85 16 10 C 0.13 -0.24 4.29 -67.12 -0.29 -0.53 16 11 H 0.11 -0.02 7.50 -51.93 -0.39 -0.41 16 12 C -0.13 0.62 7.38 -25.92 -0.19 0.43 16 13 C -0.13 0.45 3.72 -89.67 -0.33 0.12 16 14 H 0.11 -0.23 7.91 -51.93 -0.41 -0.64 16 15 C 0.12 -0.47 6.30 -4.04 -0.03 -0.50 16 16 N -0.29 0.00 3.44 -61.27 -0.21 -0.21 16 17 C -0.05 0.04 11.57 -17.05 -0.20 -0.15 16 18 C -0.05 -0.07 12.05 -17.74 -0.21 -0.28 16 19 N -0.27 -1.32 12.41 30.24 0.38 -0.94 16 20 N -0.09 -0.32 12.77 60.35 0.77 0.45 16 21 C -0.15 0.34 7.45 -25.78 -0.19 0.15 16 22 C -0.17 -0.34 9.04 -39.46 -0.36 -0.70 16 23 C -0.12 -0.30 8.66 -39.58 -0.34 -0.65 16 24 C -0.07 -0.19 5.38 -104.62 -0.56 -0.75 16 25 C -0.07 0.00 2.79 36.01 0.10 0.10 16 26 O -0.55 -0.13 12.81 -35.23 -0.45 -0.58 16 27 Si 0.68 -0.80 29.84 -169.99 -5.07 -5.87 16 28 C -0.14 -0.44 8.67 -39.46 -0.34 -0.78 16 29 H 0.06 -0.04 7.66 -51.93 -0.40 -0.43 16 30 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.06 -0.01 7.67 -51.93 -0.40 -0.40 16 32 H 0.09 -0.19 7.65 -51.93 -0.40 -0.58 16 33 H 0.10 -0.24 7.68 -51.93 -0.40 -0.64 16 34 H 0.40 -1.75 8.70 -40.82 -0.36 -2.11 16 35 H 0.10 -0.62 8.10 -51.93 -0.42 -1.04 16 36 H 0.08 -0.41 8.14 -51.93 -0.42 -0.84 16 37 H 0.11 -0.69 7.78 -51.93 -0.40 -1.09 16 38 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 39 H 0.19 -0.91 8.06 -52.49 -0.42 -1.33 16 40 H 0.19 -0.30 8.06 -52.48 -0.42 -0.72 16 41 H 0.07 0.00 8.14 -51.92 -0.42 -0.43 16 42 H 0.10 -0.33 7.91 -51.93 -0.41 -0.74 16 43 H 0.14 -0.16 6.30 -52.48 -0.33 -0.49 16 44 H 0.12 0.19 4.85 -52.49 -0.25 -0.07 16 45 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 46 H 0.38 -1.87 8.74 45.56 0.40 -1.47 16 47 H -0.25 -0.48 7.05 56.52 0.40 -0.08 16 48 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 49 H 0.14 0.18 6.30 -52.48 -0.33 -0.15 16 LS Contribution 411.59 15.07 6.20 6.20 Total: 0.00 -15.28 411.59 -8.73 -24.01 By element: Atomic # 1 Polarization: -8.84 SS G_CDS: -6.65 Total: -15.49 kcal Atomic # 6 Polarization: 1.43 SS G_CDS: -2.38 Total: -0.95 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: 0.66 Total: 0.15 kcal Atomic # 8 Polarization: -6.57 SS G_CDS: -1.48 Total: -8.05 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.07 Total: -5.87 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -15.28 -8.73 -24.01 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567714_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 58.768 kcal (2) G-P(sol) polarization free energy of solvation -15.281 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 43.487 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.726 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.007 kcal (6) G-S(sol) free energy of system = (1) + (5) 34.761 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds