Wall clock time and date at job start Tue Mar 9 2021 15:04:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 C 1.37867 * 126.45755 * 2 1 4 4 C 1.46685 * 126.23276 * 359.97438 * 3 2 1 5 5 O 1.21688 * 119.99901 * 0.02562 * 4 3 2 6 6 N 1.34781 * 119.99753 * 180.02562 * 4 3 2 7 7 C 1.46498 * 119.99478 * 180.02562 * 6 4 3 8 8 C 1.52999 * 109.46903 * 179.97438 * 7 6 4 9 9 H 1.09000 * 112.85108 * 43.80374 * 8 7 6 10 10 C 1.53779 * 113.61667 * 174.99753 * 8 7 6 11 11 C 1.53779 * 87.08351 * 139.98085 * 10 8 7 12 12 H 1.09000 * 113.61213 * 89.11568 * 11 10 8 13 13 N 1.46496 * 113.61659 * 219.93610 * 11 10 8 14 14 C 1.35311 * 125.86838 * 84.71241 * 13 11 10 15 15 C 1.35351 * 106.17787 * 179.90609 * 14 13 11 16 16 N 1.33778 * 106.49493 * 0.35650 * 15 14 13 17 17 N 1.28631 * 108.88296 * 359.77198 * 16 15 14 18 18 C 1.53775 * 113.61612 * 272.49568 * 8 7 6 19 19 N 1.37654 * 107.53256 * 179.75202 * 3 2 1 20 20 C 1.35522 * 108.64466 * 0.36283 * 19 3 2 21 21 C 1.50699 * 125.56308 * 179.89129 * 20 19 3 22 22 O 1.42903 * 109.47152 * 119.69799 * 21 20 19 23 23 Si 1.86293 * 109.47431 * 359.69691 * 21 20 19 24 24 C 1.35455 * 108.87606 * 359.63223 * 20 19 3 25 25 H 1.08998 * 109.47227 * 270.00149 * 1 2 3 26 26 H 1.08994 * 109.46863 * 30.00710 * 1 2 3 27 27 H 1.09000 * 109.46760 * 150.00448 * 1 2 3 28 28 H 0.96996 * 120.00253 * 359.97438 * 6 4 3 29 29 H 1.09007 * 109.47171 * 299.99529 * 7 6 4 30 30 H 1.08995 * 109.47208 * 59.99614 * 7 6 4 31 31 H 1.09003 * 113.61555 * 254.53044 * 10 8 7 32 32 H 1.09002 * 113.61163 * 25.34417 * 10 8 7 33 33 H 1.08005 * 126.91073 * 0.02562 * 14 13 11 34 34 H 1.07997 * 126.75498 * 180.12119 * 15 14 13 35 35 H 1.08998 * 113.61512 * 334.56695 * 18 8 7 36 36 H 1.09001 * 113.61732 * 105.46712 * 18 8 7 37 37 H 0.97003 * 125.67324 * 180.23892 * 19 3 2 38 38 H 1.09008 * 109.47393 * 239.69194 * 21 20 19 39 39 H 0.96700 * 114.00311 * 180.02562 * 22 21 20 40 40 H 1.48506 * 109.99973 * 59.99460 * 23 21 20 41 41 H 1.48493 * 110.00375 * 181.31561 * 23 21 20 42 42 H 1.07993 * 126.07210 * 180.19201 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3263 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 0.7027 2.7766 -0.0006 6 7 2.8038 3.4999 -0.0010 7 6 2.3678 4.8985 -0.0009 8 6 3.5932 5.8146 -0.0009 9 1 4.3663 5.4875 -0.6961 10 6 3.2462 7.3077 -0.1237 11 6 4.3564 7.5700 0.9075 12 1 5.3392 7.7230 0.4616 13 7 4.0120 8.5988 1.8919 14 6 3.3109 8.4018 3.0324 15 6 3.2271 9.6099 3.6370 16 7 3.8657 10.4770 2.8433 17 7 4.3192 9.8466 1.8178 18 6 4.1233 6.1343 1.4068 19 7 3.6284 0.6624 0.0057 20 6 3.6218 -0.6928 0.0010 21 6 4.8434 -1.5752 0.0024 22 8 4.8345 -2.3992 1.1699 23 14 6.3753 -0.5151 0.0023 24 6 2.3380 -1.1248 0.0007 25 1 -0.3633 0.0000 1.0276 26 1 -0.3633 0.8899 -0.5139 27 1 -0.3633 -0.8900 -0.5138 28 1 3.7500 3.2868 -0.0006 29 1 1.7688 5.0925 -0.8908 30 1 1.7694 5.0926 0.8892 31 1 3.4571 7.7255 -1.1081 32 1 2.2473 7.5548 0.2358 33 1 2.9023 7.4680 3.3894 34 1 2.7374 9.8311 4.5738 35 1 3.3648 6.0608 2.1861 36 1 5.0423 5.6047 1.6580 37 1 4.4191 1.2244 0.0103 38 1 4.8375 -2.2054 -0.8870 39 1 5.5937 -2.9943 1.2372 40 1 6.3952 0.3488 1.2101 41 1 7.5869 -1.3732 -0.0283 42 1 2.0137 -2.1549 0.0003 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567720_13940406.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 15:04:03 Heat of formation + Delta-G solvation = 112.805270 kcal Electronic energy + Delta-G solvation = -25845.847524 eV Core-core repulsion = 22024.853153 eV Total energy + Delta-G solvation = -3820.994371 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.148 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -44.23760 -42.61705 -40.98476 -39.86535 -37.99871 -36.05508 -34.19144 -33.57410 -31.99145 -31.75017 -29.51861 -28.31312 -27.37593 -26.80568 -25.20619 -23.61538 -22.55554 -22.36083 -21.54292 -21.03427 -20.29493 -19.61619 -18.83914 -18.70631 -17.50148 -17.26365 -16.87208 -16.61883 -16.47128 -16.10458 -15.91056 -15.46629 -15.22930 -15.15067 -14.90642 -14.38153 -14.15780 -14.00394 -13.96978 -13.81318 -13.62439 -13.49697 -13.39923 -13.06175 -12.92112 -12.63688 -12.62663 -12.20029 -12.17766 -12.05617 -11.72963 -11.08133 -10.98364 -10.77845 -10.34189 -10.33143 -9.78609 -9.15891 -5.39744 0.29810 0.61796 0.86922 1.19613 1.28238 1.51368 1.60633 1.68168 1.83514 1.92969 2.32901 2.71216 2.86533 3.12932 3.13658 3.20756 3.51742 3.56380 3.63381 3.78337 3.86600 4.01368 4.08056 4.10686 4.18866 4.24226 4.28394 4.30017 4.32057 4.41162 4.51689 4.55554 4.73756 4.77034 4.84696 4.92767 5.02332 5.13871 5.22491 5.24208 5.45995 5.60525 5.66603 5.90904 6.10365 6.23317 6.33708 7.05945 7.58875 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.066 4.066 3 C -0.054 4.054 4 C 0.592 3.408 5 O -0.519 6.519 6 N -0.735 5.735 7 C 0.133 3.867 8 C -0.119 4.119 9 H 0.111 0.889 10 C -0.131 4.131 11 C 0.116 3.884 12 H 0.137 0.863 13 N -0.282 5.282 14 C -0.052 4.052 15 C -0.049 4.049 16 N -0.271 5.271 17 N -0.085 5.085 18 C -0.140 4.140 19 N -0.535 5.535 20 C 0.063 3.937 21 C -0.047 4.047 22 O -0.528 6.528 23 Si 0.662 3.338 24 C -0.170 4.170 25 H 0.069 0.931 26 H 0.081 0.919 27 H 0.065 0.935 28 H 0.394 0.606 29 H 0.079 0.921 30 H 0.075 0.925 31 H 0.093 0.907 32 H 0.098 0.902 33 H 0.189 0.811 34 H 0.191 0.809 35 H 0.101 0.899 36 H 0.090 0.910 37 H 0.411 0.589 38 H 0.092 0.908 39 H 0.385 0.615 40 H -0.249 1.249 41 H -0.247 1.247 42 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.055 -5.172 -2.920 7.192 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.075 4.075 3 C -0.166 4.166 4 C 0.380 3.620 5 O -0.394 6.394 6 N -0.387 5.387 7 C 0.010 3.990 8 C -0.139 4.139 9 H 0.129 0.871 10 C -0.170 4.170 11 C 0.014 3.986 12 H 0.155 0.845 13 N -0.075 5.075 14 C -0.202 4.202 15 C -0.207 4.207 16 N -0.137 5.137 17 N -0.065 5.065 18 C -0.178 4.178 19 N -0.136 5.136 20 C -0.053 4.053 21 C -0.158 4.158 22 O -0.336 6.336 23 Si 0.562 3.438 24 C -0.195 4.195 25 H 0.087 0.913 26 H 0.100 0.900 27 H 0.084 0.916 28 H 0.228 0.772 29 H 0.097 0.903 30 H 0.093 0.907 31 H 0.112 0.888 32 H 0.117 0.883 33 H 0.205 0.795 34 H 0.208 0.792 35 H 0.119 0.881 36 H 0.109 0.891 37 H 0.250 0.750 38 H 0.110 0.890 39 H 0.233 0.767 40 H -0.173 1.173 41 H -0.171 1.171 42 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 4.209 -3.183 -3.220 6.182 hybrid contribution 0.696 -1.978 1.309 2.472 sum 4.905 -5.161 -1.911 7.372 Atomic orbital electron populations 1.20394 0.88858 1.03227 1.02528 1.20040 0.96102 0.90496 1.00839 1.20096 0.83166 0.93420 1.19885 1.16983 0.85782 0.82882 0.76333 1.90856 1.15858 1.83099 1.49596 1.45850 1.09343 1.06353 1.77146 1.21330 0.95441 0.78771 1.03452 1.22640 0.98640 0.95074 0.97508 0.87098 1.23416 0.99074 0.94452 1.00075 1.23371 1.01592 0.84592 0.89055 0.84521 1.47499 1.35257 1.08234 1.16551 1.23590 1.03830 1.02636 0.90165 1.23689 1.04621 0.89526 1.02825 1.75167 1.11690 1.26905 0.99927 1.78345 1.20182 0.88953 1.18979 1.23611 1.03481 0.92726 0.98020 1.41878 1.07101 1.06168 1.58413 1.19416 0.95791 0.82133 1.07953 1.24089 1.02929 0.97611 0.91177 1.86614 1.49156 1.55062 1.42733 0.95866 0.76329 0.84162 0.87465 1.20618 0.90484 0.99137 1.09274 0.91266 0.89995 0.91626 0.77225 0.90269 0.90694 0.88798 0.88339 0.79450 0.79228 0.88101 0.89091 0.75038 0.89017 0.76657 1.17333 1.17083 0.83586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.17 9.83 36.01 0.35 0.19 16 2 C -0.07 -0.14 6.21 -104.16 -0.65 -0.79 16 3 C -0.05 -0.05 7.06 -81.98 -0.58 -0.63 16 4 C 0.59 0.64 7.79 -12.85 -0.10 0.54 16 5 O -0.52 -2.37 14.80 5.20 0.08 -2.29 16 6 N -0.73 2.12 5.55 -61.62 -0.34 1.78 16 7 C 0.13 -0.47 5.51 -4.04 -0.02 -0.49 16 8 C -0.12 0.71 3.75 -89.81 -0.34 0.37 16 9 H 0.11 -0.82 8.14 -51.93 -0.42 -1.24 16 10 C -0.13 0.57 7.44 -25.92 -0.19 0.38 16 11 C 0.12 -0.40 4.96 -67.12 -0.33 -0.73 16 12 H 0.14 -0.59 8.14 -51.93 -0.42 -1.01 16 13 N -0.28 -0.10 3.53 -53.97 -0.19 -0.30 16 14 C -0.05 0.03 10.78 -17.05 -0.18 -0.15 16 15 C -0.05 -0.07 12.05 -17.73 -0.21 -0.29 16 16 N -0.27 -1.41 12.41 30.24 0.38 -1.03 16 17 N -0.09 -0.37 13.16 60.35 0.79 0.42 16 18 C -0.14 0.78 6.98 -25.92 -0.18 0.60 16 19 N -0.53 0.79 5.47 -5.70 -0.03 0.76 16 20 C 0.06 -0.01 6.15 -81.96 -0.50 -0.52 16 21 C -0.05 0.11 2.97 36.01 0.11 0.21 16 22 O -0.53 0.40 12.85 -35.23 -0.45 -0.05 16 23 Si 0.66 -2.54 30.96 -169.99 -5.26 -7.80 16 24 C -0.17 -0.24 10.64 -39.98 -0.43 -0.66 16 25 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 26 H 0.08 0.25 6.48 -51.93 -0.34 -0.09 16 27 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.39 -2.25 7.60 -40.82 -0.31 -2.56 16 29 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.07 -0.19 7.84 -51.93 -0.41 -0.60 16 31 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 32 H 0.10 -0.33 8.10 -51.93 -0.42 -0.75 16 33 H 0.19 -0.80 6.74 -52.48 -0.35 -1.16 16 34 H 0.19 -0.28 8.06 -52.49 -0.42 -0.71 16 35 H 0.10 -0.55 6.09 -51.93 -0.32 -0.87 16 36 H 0.09 -0.58 8.14 -51.93 -0.42 -1.01 16 37 H 0.41 -1.91 5.98 -40.82 -0.24 -2.15 16 38 H 0.09 -0.37 7.96 -51.92 -0.41 -0.78 16 39 H 0.38 -1.88 8.74 45.56 0.40 -1.49 16 40 H -0.25 0.29 7.11 56.52 0.40 0.69 16 41 H -0.25 0.37 7.11 56.52 0.40 0.77 16 42 H 0.15 0.09 8.06 -52.49 -0.42 -0.33 16 LS Contribution 353.72 15.07 5.33 5.33 Total: 0.00 -12.22 353.72 -8.37 -20.59 By element: Atomic # 1 Polarization: -10.04 SS G_CDS: -5.41 Total: -15.45 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: -3.26 Total: -1.97 kcal Atomic # 7 Polarization: 1.03 SS G_CDS: 0.61 Total: 1.64 kcal Atomic # 8 Polarization: -1.96 SS G_CDS: -0.38 Total: -2.34 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: -5.26 Total: -7.80 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -12.22 -8.37 -20.59 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567720_13940406.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.393 kcal (2) G-P(sol) polarization free energy of solvation -12.222 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 121.171 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.366 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.588 kcal (6) G-S(sol) free energy of system = (1) + (5) 112.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds