Wall clock time and date at job start Tue Mar 9 2021 12:54:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86298 * 109.47616 * 2 1 4 4 C 1.50702 * 109.46982 * 119.99908 * 2 1 3 5 5 C 1.38238 * 119.93778 * 65.00021 * 4 2 1 6 6 C 1.38192 * 120.07187 * 179.97438 * 5 4 2 7 7 C 1.38678 * 119.95143 * 359.97438 * 6 5 4 8 8 O 1.35917 * 120.05966 * 180.02562 * 7 6 5 9 9 C 1.42903 * 116.99802 * 359.97438 * 8 7 6 10 10 C 1.50703 * 109.46957 * 180.02562 * 9 8 7 11 11 O 1.21276 * 120.00112 * 359.97438 * 10 9 8 12 12 N 1.34780 * 119.99961 * 180.02562 * 10 9 8 13 13 C 1.46492 * 120.00227 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.47417 * 179.97438 * 13 12 10 15 15 H 1.08997 * 112.84897 * 314.66514 * 14 13 12 16 16 C 1.53783 * 113.61593 * 85.85946 * 14 13 12 17 17 C 1.53959 * 87.01942 * 139.95182 * 16 14 13 18 18 H 1.08998 * 113.53422 * 89.19109 * 17 16 14 19 19 N 1.46503 * 113.74197 * 220.05501 * 17 16 14 20 20 C 1.34427 * 126.82249 * 12.60243 * 19 17 16 21 21 N 1.30832 * 108.07610 * 179.97438 * 20 19 17 22 22 C 1.33242 * 109.82708 * 359.97438 * 21 20 19 23 23 N 1.30711 * 108.94601 * 359.75529 * 22 21 20 24 24 C 1.53779 * 87.10987 * 334.63656 * 17 16 14 25 25 C 1.38835 * 119.88632 * 359.97438 * 7 6 5 26 26 Br 1.89098 * 120.03979 * 179.72254 * 25 7 6 27 27 C 1.38199 * 119.92403 * 0.02562 * 25 7 6 28 28 H 0.96707 * 114.00151 * 300.00333 * 1 2 3 29 29 H 1.08996 * 109.47467 * 240.00011 * 2 1 3 30 30 H 1.48500 * 110.00574 * 178.67848 * 3 2 1 31 31 H 1.48500 * 110.00139 * 300.00201 * 3 2 1 32 32 H 1.07993 * 119.96725 * 0.02562 * 5 4 2 33 33 H 1.07995 * 120.02459 * 180.02562 * 6 5 4 34 34 H 1.08996 * 109.46988 * 300.00179 * 9 8 7 35 35 H 1.08998 * 109.47245 * 60.00141 * 9 8 7 36 36 H 0.97001 * 119.99499 * 359.97438 * 12 10 9 37 37 H 1.09012 * 109.46925 * 299.99988 * 13 12 10 38 38 H 1.08998 * 109.47251 * 59.99554 * 13 12 10 39 39 H 1.09000 * 113.61694 * 254.53650 * 16 14 13 40 40 H 1.09009 * 113.61116 * 25.43585 * 16 14 13 41 41 H 1.08003 * 125.96489 * 359.97438 * 20 19 17 42 42 H 1.08005 * 125.52400 * 179.97438 * 22 21 20 43 43 H 1.08999 * 113.61821 * 270.81103 * 24 17 16 44 44 H 1.09005 * 113.68467 * 139.91757 * 24 17 16 45 45 H 1.08000 * 119.97741 * 179.97438 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 1.6839 -2.0602 1.3971 6 6 2.1436 -2.7145 2.5241 7 6 2.8544 -2.0161 3.4886 8 8 3.3081 -2.6576 4.5977 9 6 3.0161 -4.0523 4.7055 10 6 3.5931 -4.5885 5.9903 11 8 4.1954 -3.8492 6.7396 12 7 3.4406 -5.8898 6.3061 13 6 4.0010 -6.4110 7.5553 14 6 3.6886 -7.9042 7.6706 15 1 2.6543 -8.1408 7.4207 16 6 4.7147 -8.8048 6.9629 17 6 4.5882 -9.7575 8.1658 18 1 3.8004 -10.5018 8.0505 19 7 5.8627 -10.3396 8.5937 20 6 7.0929 -9.9530 8.2142 21 7 7.9638 -10.7211 8.8168 22 6 7.3304 -11.6055 9.5861 23 7 6.0420 -11.4081 9.4873 24 6 4.1622 -8.5324 8.9920 25 6 3.1027 -0.6607 3.3189 26 35 4.0646 0.2975 4.6350 27 6 2.6406 -0.0113 2.1899 28 1 -0.3934 0.4418 0.7651 29 1 1.7923 -0.5138 -0.8899 30 1 3.5346 1.7702 0.0322 31 1 1.5616 2.4679 -1.2085 32 1 1.1314 -2.6042 0.6453 33 1 1.9503 -3.7692 2.6533 34 1 1.9360 -4.1986 4.7037 35 1 3.4558 -4.5819 3.8604 36 1 2.9592 -6.4812 5.7066 37 1 5.0812 -6.2641 7.5581 38 1 3.5602 -5.8816 8.4000 39 1 4.3508 -9.2302 6.0276 40 1 5.7013 -8.3511 6.8672 41 1 7.3224 -9.1486 7.5309 42 1 7.8047 -12.3605 10.1956 43 1 4.9973 -8.0041 9.4520 44 1 3.3529 -8.7369 9.6929 45 1 2.8329 1.0431 2.0572 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17567722_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:36 Heat of formation + Delta-G solvation = 58.877014 kcal Electronic energy + Delta-G solvation = -30271.354140 eV Core-core repulsion = 25726.720840 eV Total energy + Delta-G solvation = -4544.633300 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.063 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -43.13520 -41.66769 -40.84027 -39.99193 -39.03560 -37.20695 -35.80722 -33.56436 -33.43641 -32.21706 -32.11918 -30.78722 -30.03787 -28.20532 -26.93498 -26.32610 -25.06532 -23.92166 -22.97372 -22.48203 -22.30394 -21.69210 -20.42027 -19.53483 -18.80201 -18.27740 -17.86437 -17.53659 -17.27422 -17.04467 -16.73218 -16.49179 -16.19011 -16.08247 -15.91742 -15.73144 -15.60145 -15.15334 -14.99387 -14.76296 -14.61603 -14.27947 -14.06502 -13.86507 -13.63793 -13.56681 -13.42168 -13.35649 -12.87990 -12.40231 -12.28196 -12.23329 -12.14793 -11.87335 -11.84717 -11.79301 -11.65306 -11.18937 -11.05873 -10.98131 -10.86248 -10.56543 -10.44997 -10.17930 -9.98292 -9.30387 -5.03017 -0.02133 0.09759 0.61674 0.65308 1.29097 1.33694 1.45841 1.48683 1.60015 1.93685 1.94991 2.41173 2.51752 3.10242 3.29586 3.43232 3.48021 3.50225 3.57686 3.60887 3.67176 3.80795 3.86099 3.87940 4.05683 4.09493 4.10570 4.12576 4.18335 4.30298 4.35875 4.46098 4.58230 4.62080 4.64592 4.70594 4.78495 4.80187 4.88648 4.94625 5.04606 5.14369 5.31578 5.32114 5.40790 5.43649 5.47960 5.88164 6.07460 6.47770 6.77713 7.07760 7.16924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.052 4.052 3 Si 0.741 3.259 4 C -0.153 4.153 5 C -0.034 4.034 6 C -0.194 4.194 7 C 0.150 3.850 8 O -0.305 6.305 9 C 0.032 3.968 10 C 0.511 3.489 11 O -0.571 6.571 12 N -0.706 5.706 13 C 0.133 3.867 14 C -0.097 4.097 15 H 0.134 0.866 16 C -0.128 4.128 17 C 0.119 3.881 18 H 0.133 0.867 19 N -0.368 5.368 20 C 0.254 3.746 21 N -0.582 5.582 22 C 0.188 3.812 23 N -0.353 5.353 24 C -0.138 4.138 25 C -0.141 4.141 26 Br -0.050 7.050 27 C -0.054 4.054 28 H 0.396 0.604 29 H 0.119 0.881 30 H -0.289 1.289 31 H -0.293 1.293 32 H 0.155 0.845 33 H 0.175 0.825 34 H 0.131 0.869 35 H 0.130 0.870 36 H 0.423 0.577 37 H 0.063 0.937 38 H 0.060 0.940 39 H 0.112 0.888 40 H 0.100 0.900 41 H 0.249 0.751 42 H 0.235 0.765 43 H 0.081 0.919 44 H 0.087 0.913 45 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.242 -3.473 -4.484 9.198 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.164 4.164 3 Si 0.648 3.352 4 C -0.154 4.154 5 C -0.052 4.052 6 C -0.213 4.213 7 C 0.102 3.898 8 O -0.217 6.217 9 C -0.045 4.045 10 C 0.297 3.703 11 O -0.449 6.449 12 N -0.361 5.361 13 C 0.010 3.990 14 C -0.116 4.116 15 H 0.152 0.848 16 C -0.167 4.167 17 C 0.018 3.982 18 H 0.150 0.850 19 N -0.159 5.159 20 C -0.042 4.042 21 N -0.310 5.310 22 C -0.115 4.115 23 N -0.181 5.181 24 C -0.177 4.177 25 C -0.221 4.221 26 Br 0.035 6.965 27 C -0.073 4.073 28 H 0.246 0.754 29 H 0.136 0.864 30 H -0.216 1.216 31 H -0.221 1.221 32 H 0.173 0.827 33 H 0.192 0.808 34 H 0.148 0.852 35 H 0.148 0.852 36 H 0.262 0.738 37 H 0.081 0.919 38 H 0.078 0.922 39 H 0.131 0.869 40 H 0.118 0.882 41 H 0.265 0.735 42 H 0.251 0.749 43 H 0.099 0.901 44 H 0.106 0.894 45 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -6.035 -2.619 -3.897 7.646 hybrid contribution 0.028 -0.808 -0.451 0.926 sum -6.007 -3.427 -4.348 8.169 Atomic orbital electron populations 1.86477 1.16794 1.81969 1.50600 1.24811 0.85406 1.09177 0.96963 0.94026 0.78475 0.77140 0.85537 1.20292 1.02066 0.95676 0.97377 1.21220 0.94494 0.93093 0.96425 1.21610 1.02611 1.02381 0.94699 1.18796 0.93549 0.90551 0.86875 1.86246 1.73324 1.23550 1.38608 1.22862 1.04019 0.80347 0.97319 1.20481 0.79741 0.82762 0.87357 1.90804 1.42644 1.58585 1.52842 1.45593 1.57835 1.08670 1.23985 1.21292 0.98677 0.93142 0.85934 1.22502 1.01586 0.91619 0.95854 0.84811 1.23636 1.01282 0.94532 0.97216 1.23425 0.82543 0.94503 0.97745 0.84950 1.50770 1.08395 1.24196 1.32506 1.26593 0.80463 0.99102 0.97996 1.70580 1.35289 1.09948 1.15182 1.26514 0.87865 0.98907 0.98169 1.77986 1.19940 1.06805 1.13346 1.23432 1.02126 0.94589 0.97552 1.21148 1.09283 0.93201 0.98436 1.96779 1.73418 1.73352 1.52907 1.20909 0.95493 0.99861 0.91075 0.75415 0.86416 1.21628 1.22056 0.82702 0.80808 0.85187 0.85235 0.73834 0.91883 0.92207 0.86920 0.88153 0.73500 0.74908 0.90074 0.89443 0.83607 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.95 12.83 -148.98 -1.91 0.04 16 2 C -0.05 0.19 2.80 71.24 0.20 0.39 16 3 Si 0.74 -1.69 29.80 68.60 2.04 0.36 16 4 C -0.15 0.48 5.35 -19.85 -0.11 0.38 16 5 C -0.03 0.19 9.68 22.26 0.22 0.41 16 6 C -0.19 1.22 9.04 22.36 0.20 1.42 16 7 C 0.15 0.05 6.68 22.52 0.15 0.20 16 8 O -0.30 -0.74 9.01 -73.58 -0.66 -1.40 16 9 C 0.03 -0.25 5.22 71.24 0.37 0.12 16 10 C 0.51 -1.01 7.91 87.66 0.69 -0.31 16 11 O -0.57 -6.21 16.50 16.02 0.26 -5.94 16 12 N -0.71 7.41 5.56 -463.07 -2.57 4.84 16 13 C 0.13 -1.13 5.50 86.38 0.47 -0.66 16 14 C -0.10 1.36 3.75 -10.27 -0.04 1.32 16 15 H 0.13 -2.44 8.14 -2.39 -0.02 -2.46 16 16 C -0.13 1.84 7.01 31.18 0.22 2.05 16 17 C 0.12 -0.94 5.07 45.58 0.23 -0.71 16 18 H 0.13 -1.17 8.14 -2.39 -0.02 -1.19 16 19 N -0.37 -0.06 3.83 -328.65 -1.26 -1.31 16 20 C 0.25 -0.01 11.87 180.36 2.14 2.13 16 21 N -0.58 -3.81 11.19 -204.00 -2.28 -6.10 16 22 C 0.19 1.05 13.03 180.76 2.36 3.41 16 23 N -0.35 -2.31 12.70 -61.24 -0.78 -3.09 16 24 C -0.14 1.21 7.44 31.12 0.23 1.44 16 25 C -0.14 -0.44 6.24 22.40 0.14 -0.30 16 26 Br -0.05 -0.34 33.16 -20.37 -0.68 -1.02 16 27 C -0.05 0.03 8.40 22.27 0.19 0.21 16 28 H 0.40 -4.29 8.70 -74.05 -0.64 -4.93 16 29 H 0.12 -0.45 7.96 -2.39 -0.02 -0.47 16 30 H -0.29 -1.05 7.11 99.48 0.71 -0.34 16 31 H -0.29 -1.43 7.11 99.48 0.71 -0.72 16 32 H 0.16 -1.40 8.06 -2.91 -0.02 -1.43 16 33 H 0.17 -2.46 6.30 -2.91 -0.02 -2.48 16 34 H 0.13 -1.89 7.66 -2.39 -0.02 -1.91 16 35 H 0.13 -1.89 7.66 -2.39 -0.02 -1.91 16 36 H 0.42 -7.96 8.47 -92.71 -0.79 -8.74 16 37 H 0.06 -0.35 7.88 -2.38 -0.02 -0.37 16 38 H 0.06 -0.25 8.14 -2.39 -0.02 -0.27 16 39 H 0.11 -1.99 8.14 -2.39 -0.02 -2.01 16 40 H 0.10 -1.44 6.18 -2.38 -0.01 -1.46 16 41 H 0.25 -2.23 6.76 -2.91 -0.02 -2.24 16 42 H 0.23 -0.14 8.06 -2.91 -0.02 -0.16 16 43 H 0.08 -0.45 8.10 -2.39 -0.02 -0.46 16 44 H 0.09 -0.72 8.14 -2.38 -0.02 -0.74 16 45 H 0.15 -0.38 4.90 -2.91 -0.01 -0.39 16 Total: 0.00 -36.31 401.16 -0.49 -36.79 By element: Atomic # 1 Polarization: -34.36 SS G_CDS: -0.32 Total: -34.68 kcal Atomic # 6 Polarization: 3.85 SS G_CDS: 7.67 Total: 11.51 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -6.89 Total: -5.66 kcal Atomic # 8 Polarization: -4.99 SS G_CDS: -2.31 Total: -7.30 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: 2.04 Total: 0.36 kcal Atomic # 35 Polarization: -0.34 SS G_CDS: -0.68 Total: -1.02 kcal Total: -36.31 -0.49 -36.79 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567722_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 95.669 kcal (2) G-P(sol) polarization free energy of solvation -36.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.486 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.792 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.877 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds