Wall clock time and date at job start Tue Mar 9 2021 12:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42910 * 1 3 3 Si 1.86300 * 109.47159 * 2 1 4 4 C 1.50702 * 109.46895 * 120.00050 * 2 1 3 5 5 C 1.31113 * 118.54694 * 250.00049 * 4 2 1 6 6 N 1.38927 * 121.84612 * 180.68961 * 5 4 2 7 7 C 1.47136 * 118.81058 * 346.19809 * 6 5 4 8 8 C 1.53538 * 107.53522 * 44.06904 * 7 6 5 9 9 C 1.50202 * 118.54279 * 70.02191 * 4 2 1 10 10 C 1.50697 * 109.33638 * 39.66639 * 9 4 2 11 11 O 1.21274 * 120.00480 * 119.99896 * 10 9 4 12 12 N 1.34776 * 119.99589 * 299.99797 * 10 9 4 13 13 C 1.46495 * 120.00135 * 179.97438 * 12 10 9 14 14 H 1.09007 * 112.85357 * 334.67209 * 13 12 10 15 15 C 1.53785 * 113.61598 * 105.86159 * 13 12 10 16 16 C 1.54055 * 86.98353 * 89.16518 * 15 13 12 17 17 H 1.09002 * 113.61341 * 270.89076 * 16 15 13 18 18 N 1.46503 * 113.61835 * 139.97951 * 16 15 13 19 19 C 1.35305 * 125.86997 * 347.22468 * 18 16 15 20 20 C 1.35347 * 106.17597 * 179.90581 * 19 18 16 21 21 N 1.33771 * 106.49842 * 0.34701 * 20 19 18 22 22 N 1.28633 * 108.88235 * 359.77855 * 21 20 19 23 23 C 1.53779 * 87.07728 * 25.43288 * 16 15 13 24 24 H 0.96696 * 113.99665 * 299.99845 * 1 2 3 25 25 H 1.09004 * 109.46872 * 239.99712 * 2 1 3 26 26 H 1.48500 * 109.99818 * 178.68101 * 3 2 1 27 27 H 1.48500 * 110.00093 * 299.99985 * 3 2 1 28 28 H 1.08002 * 119.07306 * 0.40112 * 5 4 2 29 29 H 0.96998 * 120.55860 * 166.42678 * 6 5 4 30 30 H 1.09003 * 110.02146 * 284.48927 * 7 6 5 31 31 H 1.08997 * 109.79665 * 163.52596 * 7 6 5 32 32 H 1.09003 * 109.62158 * 179.16258 * 8 7 6 33 33 H 1.09001 * 109.62171 * 58.60857 * 8 7 6 34 34 H 1.09007 * 109.33277 * 280.00634 * 9 4 2 35 35 H 0.97001 * 120.00172 * 0.02562 * 12 10 9 36 36 H 1.09001 * 113.61792 * 203.66713 * 15 13 12 37 37 H 1.08996 * 113.60973 * 334.57480 * 15 13 12 38 38 H 1.08005 * 126.91197 * 0.02562 * 19 18 16 39 39 H 1.07997 * 126.75221 * 180.12843 * 20 19 18 40 40 H 1.09000 * 113.61791 * 220.02097 * 23 16 15 41 41 H 1.09001 * 113.61319 * 89.11958 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.5116 -0.0029 2.1695 6 7 3.0122 -0.5890 3.3253 7 6 2.6238 -1.9718 3.6446 8 6 2.7185 -2.7899 2.3488 9 6 1.7455 -2.1978 1.3266 10 6 1.9991 -2.8205 -0.0221 11 8 2.8810 -3.6424 -0.1545 12 7 1.2457 -2.4640 -1.0812 13 6 1.4925 -3.0688 -2.3925 14 1 2.5167 -3.4234 -2.5092 15 6 0.4319 -4.1040 -2.8029 16 6 -0.3497 -2.9341 -3.4304 17 1 -1.0369 -2.4471 -2.7385 18 7 -0.9727 -3.2660 -4.7141 19 6 -0.7161 -4.3660 -5.4591 20 6 -1.5066 -4.2728 -6.5538 21 7 -2.1933 -3.1315 -6.4304 22 7 -1.8542 -2.5584 -5.3299 23 6 1.0000 -2.2104 -3.5695 24 1 -0.3932 0.4417 0.7650 25 1 1.7924 -0.5139 -0.8900 26 1 3.5347 1.7702 0.0321 27 1 1.5616 2.4679 -1.2085 28 1 2.6071 1.0649 2.0387 29 1 3.6045 -0.0939 3.9126 30 1 1.6015 -1.9945 4.0222 31 1 3.3027 -2.3828 4.3918 32 1 2.4511 -3.8272 2.5505 33 1 3.7349 -2.7403 1.9582 34 1 0.7235 -2.4145 1.6376 35 1 0.5406 -1.8064 -0.9755 36 1 0.7901 -4.8307 -3.5321 37 1 -0.0766 -4.5668 -1.9571 38 1 -0.0218 -5.1597 -5.2260 39 1 -1.5679 -4.9790 -7.3685 40 1 0.9500 -1.1455 -3.3423 41 1 1.5133 -2.4203 -4.5079 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17567748_15608500.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:31 Heat of formation + Delta-G solvation = 100.984921 kcal Electronic energy + Delta-G solvation = -25938.994347 eV Core-core repulsion = 22245.713548 eV Total energy + Delta-G solvation = -3693.280799 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.148 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -44.17565 -41.89336 -40.38933 -38.95789 -37.79542 -35.13430 -33.86874 -33.00331 -32.73108 -31.90065 -27.69279 -27.29023 -26.91477 -25.71619 -23.56188 -23.41181 -22.89162 -22.04992 -20.67016 -19.45948 -19.34214 -18.83060 -18.02893 -17.49365 -17.34554 -17.21676 -16.61996 -16.11154 -16.00774 -15.70380 -15.48314 -15.39750 -15.01744 -14.80880 -14.60997 -14.24952 -14.11673 -13.93933 -13.64183 -13.48542 -13.32094 -12.78694 -12.62656 -12.44722 -12.26060 -12.07204 -12.04347 -11.93415 -11.64154 -11.54216 -10.94885 -10.82461 -10.48163 -10.27252 -10.09921 -8.66364 -5.13387 0.68416 1.05988 1.22372 1.36507 1.54947 1.64151 1.73938 1.92982 2.04054 2.39601 2.78924 3.00834 3.26153 3.33175 3.49375 3.52720 3.58654 3.66153 3.79947 4.06188 4.07558 4.12080 4.15828 4.22403 4.24714 4.31057 4.37237 4.39946 4.45374 4.52360 4.55285 4.59110 4.65568 4.73501 4.83707 5.03739 5.17487 5.24908 5.28036 5.36639 5.67079 6.09578 6.35534 6.54967 6.63970 7.18332 7.65212 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.066 4.066 3 Si 0.668 3.332 4 C -0.288 4.288 5 C 0.165 3.835 6 N -0.747 5.747 7 C 0.120 3.880 8 C -0.122 4.122 9 C -0.035 4.035 10 C 0.529 3.471 11 O -0.536 6.536 12 N -0.719 5.719 13 C 0.125 3.875 14 H 0.118 0.882 15 C -0.153 4.153 16 C 0.116 3.884 17 H 0.136 0.864 18 N -0.281 5.281 19 C -0.052 4.052 20 C -0.051 4.051 21 N -0.272 5.272 22 N -0.085 5.085 23 C -0.150 4.150 24 H 0.383 0.617 25 H 0.117 0.883 26 H -0.259 1.259 27 H -0.255 1.255 28 H 0.134 0.866 29 H 0.405 0.595 30 H 0.065 0.935 31 H 0.084 0.916 32 H 0.081 0.919 33 H 0.080 0.920 34 H 0.099 0.901 35 H 0.417 0.583 36 H 0.107 0.893 37 H 0.093 0.907 38 H 0.189 0.811 39 H 0.191 0.809 40 H 0.093 0.907 41 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.937 0.932 7.459 7.762 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.178 4.178 3 Si 0.571 3.429 4 C -0.299 4.299 5 C 0.043 3.957 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.161 4.161 9 C -0.056 4.056 10 C 0.317 3.683 11 O -0.411 6.411 12 N -0.377 5.377 13 C 0.018 3.982 14 H 0.136 0.864 15 C -0.193 4.193 16 C 0.014 3.986 17 H 0.154 0.846 18 N -0.074 5.074 19 C -0.202 4.202 20 C -0.208 4.208 21 N -0.138 5.138 22 N -0.064 5.064 23 C -0.189 4.189 24 H 0.232 0.768 25 H 0.134 0.866 26 H -0.184 1.184 27 H -0.180 1.180 28 H 0.151 0.849 29 H 0.239 0.761 30 H 0.083 0.917 31 H 0.102 0.898 32 H 0.100 0.900 33 H 0.099 0.901 34 H 0.117 0.883 35 H 0.258 0.742 36 H 0.125 0.875 37 H 0.112 0.888 38 H 0.206 0.794 39 H 0.208 0.792 40 H 0.111 0.889 41 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 2.219 1.808 6.470 7.075 hybrid contribution 0.613 -1.106 0.039 1.265 sum 2.833 0.702 6.509 7.133 Atomic orbital electron populations 1.86296 1.17874 1.81721 1.49986 1.25096 0.84815 1.09421 0.98432 0.95249 0.81257 0.78313 0.88117 1.20492 1.16341 0.94035 0.99048 1.20350 0.93211 0.95688 0.86500 1.44655 1.53609 1.14722 1.24689 1.21675 1.00711 0.81362 0.96707 1.21758 1.00598 0.99312 0.94433 1.19658 1.01499 0.92376 0.92067 1.20658 0.80673 0.81063 0.85948 1.90712 1.31957 1.33347 1.85111 1.46365 1.38180 1.45322 1.07787 1.21607 1.00526 0.93459 0.82634 0.86381 1.24000 0.96857 0.96702 1.01712 1.23571 0.94090 0.99736 0.81169 0.84639 1.47506 1.27539 1.15148 1.17223 1.23609 1.06640 0.95153 0.94832 1.23677 0.98257 0.98350 1.00488 1.75160 1.21406 1.07218 1.09999 1.78353 1.05682 1.19281 1.03092 1.23831 0.93927 1.01345 0.99777 0.76834 0.86568 1.18438 1.17979 0.84947 0.76073 0.91706 0.89765 0.90028 0.90117 0.88288 0.74208 0.87500 0.88842 0.79358 0.79242 0.88885 0.87449 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.71 11.40 -35.23 -0.40 1.31 16 2 C -0.07 0.14 1.69 36.01 0.06 0.20 16 3 Si 0.67 -1.41 29.73 -169.99 -5.05 -6.46 16 4 C -0.29 0.56 5.03 -101.34 -0.51 0.05 16 5 C 0.16 -0.47 9.61 -16.08 -0.15 -0.62 16 6 N -0.75 2.48 5.83 -60.61 -0.35 2.13 16 7 C 0.12 -0.38 7.16 -3.42 -0.02 -0.41 16 8 C -0.12 0.12 4.91 -26.43 -0.13 -0.01 16 9 C -0.03 0.03 2.74 -93.14 -0.26 -0.22 16 10 C 0.53 0.61 6.82 -10.99 -0.07 0.54 16 11 O -0.54 -2.52 15.42 5.56 0.09 -2.44 16 12 N -0.72 0.64 3.57 -53.02 -0.19 0.46 16 13 C 0.12 -0.18 4.29 -67.12 -0.29 -0.47 16 14 H 0.12 -0.04 7.50 -51.93 -0.39 -0.43 16 15 C -0.15 0.37 7.24 -25.77 -0.19 0.18 16 16 C 0.12 -0.13 4.85 -66.97 -0.32 -0.46 16 17 H 0.14 -0.20 8.14 -51.93 -0.42 -0.62 16 18 N -0.28 -0.47 3.53 -53.83 -0.19 -0.66 16 19 C -0.05 -0.01 10.78 -17.05 -0.18 -0.20 16 20 C -0.05 -0.11 12.05 -17.74 -0.21 -0.32 16 21 N -0.27 -1.61 12.41 30.23 0.38 -1.23 16 22 N -0.08 -0.45 13.16 60.35 0.79 0.34 16 23 C -0.15 0.28 7.62 -25.92 -0.20 0.08 16 24 H 0.38 -2.46 8.70 45.56 0.40 -2.06 16 25 H 0.12 -0.09 5.33 -51.93 -0.28 -0.37 16 26 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 27 H -0.25 -0.40 7.11 56.52 0.40 0.00 16 28 H 0.13 -0.63 4.49 -52.49 -0.24 -0.86 16 29 H 0.40 -2.02 8.96 -40.82 -0.37 -2.38 16 30 H 0.06 -0.24 8.14 -51.93 -0.42 -0.66 16 31 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 32 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.08 0.11 7.75 -51.93 -0.40 -0.30 16 34 H 0.10 -0.20 8.14 -51.92 -0.42 -0.62 16 35 H 0.42 -0.70 5.32 -40.82 -0.22 -0.92 16 36 H 0.11 -0.39 6.33 -51.93 -0.33 -0.72 16 37 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.19 -0.68 6.74 -52.48 -0.35 -1.03 16 39 H 0.19 -0.20 8.06 -52.49 -0.42 -0.62 16 40 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 41 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 LS Contribution 328.40 15.07 4.95 4.95 Total: 0.00 -10.18 328.40 -7.64 -17.83 By element: Atomic # 1 Polarization: -9.38 SS G_CDS: -5.18 Total: -14.56 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -2.48 Total: -1.66 kcal Atomic # 7 Polarization: 0.60 SS G_CDS: 0.44 Total: 1.03 kcal Atomic # 8 Polarization: -0.81 SS G_CDS: -0.32 Total: -1.13 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.05 Total: -6.46 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -10.18 -7.64 -17.83 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17567748_15608500.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 118.810 kcal (2) G-P(sol) polarization free energy of solvation -10.183 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.627 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.825 kcal (6) G-S(sol) free energy of system = (1) + (5) 100.985 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds