Wall clock time and date at job start Tue Mar 9 2021 13:32:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.47292 * 2 1 4 4 C 1.50695 * 109.47230 * 120.00261 * 2 1 3 5 5 C 1.38185 * 119.84230 * 255.02043 * 4 2 1 6 6 C 1.38316 * 120.14790 * 179.76301 * 5 4 2 7 7 F 1.35097 * 120.08495 * 180.25691 * 6 5 4 8 8 C 1.39807 * 119.82677 * 0.46901 * 6 5 4 9 9 C 1.47699 * 120.15355 * 179.79068 * 8 6 5 10 10 O 1.21569 * 119.99911 * 359.71714 * 9 8 6 11 11 N 1.34773 * 119.99893 * 179.72280 * 9 8 6 12 12 C 1.46502 * 119.99833 * 179.97438 * 11 9 8 13 13 C 1.50699 * 112.84763 * 309.66322 * 12 11 9 14 14 C 1.38436 * 120.00926 * 168.80235 * 13 12 11 15 15 F 1.35104 * 120.02854 * 0.02562 * 14 13 12 16 16 C 1.38487 * 119.94649 * 180.27518 * 14 13 12 17 17 C 1.38177 * 119.97478 * 359.47260 * 16 14 13 18 18 C 1.38265 * 120.02212 * 0.55159 * 17 16 14 19 19 C 1.38216 * 120.01501 * 348.82872 * 13 12 11 20 20 C 1.53788 * 113.61441 * 178.46965 * 12 11 9 21 21 C 1.53783 * 87.07897 * 270.79907 * 20 12 11 22 22 H 1.09003 * 113.61262 * 89.11621 * 21 20 12 23 23 F 1.39899 * 113.61249 * 220.01792 * 21 20 12 24 24 C 1.53782 * 87.08225 * 334.56597 * 21 20 12 25 25 C 1.39661 * 119.69310 * 359.51113 * 8 6 5 26 26 C 1.38071 * 119.84869 * 0.25472 * 25 8 6 27 27 F 1.35099 * 119.91546 * 180.02562 * 26 25 8 28 28 H 0.96702 * 113.99682 * 300.00125 * 1 2 3 29 29 H 1.09004 * 109.46930 * 240.00443 * 2 1 3 30 30 H 1.48496 * 109.99869 * 178.68249 * 3 2 1 31 31 H 1.48503 * 109.99654 * 300.00197 * 3 2 1 32 32 H 1.08000 * 119.92757 * 359.97438 * 5 4 2 33 33 H 0.96999 * 120.00535 * 359.97438 * 11 9 8 34 34 H 1.07999 * 120.00836 * 179.75147 * 16 14 13 35 35 H 1.07994 * 119.98832 * 180.29820 * 17 16 14 36 36 H 1.08001 * 119.97583 * 179.72479 * 18 17 16 37 37 H 1.08001 * 119.98647 * 359.95224 * 19 13 12 38 38 H 1.09004 * 113.61333 * 25.34408 * 20 12 11 39 39 H 1.08991 * 113.61398 * 156.25451 * 20 12 11 40 40 H 1.08992 * 113.61631 * 270.88204 * 24 21 20 41 41 H 1.09008 * 113.61084 * 139.98087 * 24 21 20 42 42 H 1.07996 * 120.07409 * 180.27889 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4527 0.0198 2.2814 6 6 2.9110 -0.6255 3.4157 7 9 3.4157 0.0900 4.4445 8 6 2.8548 -2.0203 3.4929 9 6 3.3465 -2.7170 4.6988 10 8 3.8062 -2.0778 5.6251 11 7 3.2857 -4.0614 4.7722 12 6 3.7740 -4.7525 5.9681 13 6 5.1592 -4.3168 6.3712 14 6 5.6740 -4.6949 7.5994 15 9 4.9352 -5.4549 8.4372 16 6 6.9449 -4.2890 7.9708 17 6 7.7018 -3.5165 7.1108 18 6 7.1863 -3.1392 5.8846 19 6 5.9159 -3.5393 5.5149 20 6 3.6006 -6.2795 5.9111 21 6 2.2128 -6.0664 6.5384 22 1 1.4213 -5.9113 5.8050 23 9 1.8810 -7.0234 7.5034 24 6 2.7679 -4.7606 7.1312 25 6 2.3262 -2.7514 2.4268 26 6 1.8678 -2.0937 1.3027 27 9 1.3557 -2.7995 0.2709 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.4992 1.0969 2.2183 33 1 2.9187 -4.5714 4.0333 34 1 7.3459 -4.5800 8.9304 35 1 8.6948 -3.2040 7.3982 36 1 7.7769 -2.5317 5.2148 37 1 5.5146 -3.2446 4.5565 38 1 3.5649 -6.6773 4.8969 39 1 4.2923 -6.8218 6.5556 40 1 3.2320 -4.8876 8.1091 41 1 2.0600 -3.9322 7.1019 42 1 2.2756 -3.8288 2.4818 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17636826_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:35 Heat of formation + Delta-G solvation = -137.653536 kcal Electronic energy + Delta-G solvation = -36030.066747 eV Core-core repulsion = 30636.722366 eV Total energy + Delta-G solvation = -5393.344381 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.098 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -50.18919 -50.09238 -50.08163 -48.53419 -42.18213 -40.64781 -39.46626 -38.83938 -37.76127 -34.77259 -33.21938 -32.10778 -31.51679 -31.38343 -28.11027 -27.26615 -26.14914 -24.56414 -24.24893 -23.60323 -22.83790 -22.16254 -20.86471 -19.87859 -18.93422 -18.85929 -18.52693 -18.04150 -17.93948 -17.45709 -17.23688 -17.12861 -16.92703 -16.85283 -16.65083 -16.63217 -16.25572 -16.07216 -15.98480 -15.85001 -15.71442 -15.62075 -15.29126 -14.92416 -14.74101 -14.38736 -14.27586 -14.08897 -13.90157 -13.79174 -13.55776 -13.29552 -13.13067 -12.96940 -12.85516 -12.73691 -12.47439 -12.22941 -12.19242 -11.62779 -11.48765 -11.25706 -10.77489 -10.74253 -10.49945 -9.95154 -9.83375 -9.60125 -5.25296 -0.95718 -0.46921 0.12955 0.25684 0.97418 1.26959 1.44855 1.52492 1.78343 2.10156 2.52493 2.64153 2.68771 2.92989 2.98501 3.06319 3.10696 3.20943 3.23108 3.30159 3.34232 3.47626 3.56964 3.63358 3.79434 3.87867 3.94121 4.06512 4.15413 4.17911 4.27638 4.34699 4.37667 4.41761 4.48092 4.50412 4.52070 4.57834 4.75474 4.79260 4.91194 5.02592 5.07562 5.22920 5.28474 5.37074 5.44794 5.88166 6.04324 6.29369 6.83342 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.073 4.073 3 Si 0.689 3.311 4 C -0.099 4.099 5 C -0.130 4.130 6 C 0.162 3.838 7 F -0.102 7.102 8 C -0.143 4.143 9 C 0.558 3.442 10 O -0.490 6.490 11 N -0.707 5.707 12 C 0.200 3.800 13 C -0.104 4.104 14 C 0.106 3.894 15 F -0.131 7.131 16 C -0.151 4.151 17 C -0.087 4.087 18 C -0.127 4.127 19 C -0.059 4.059 20 C -0.153 4.153 21 C 0.071 3.929 22 H 0.110 0.890 23 F -0.199 7.199 24 C -0.177 4.177 25 C -0.094 4.094 26 C 0.111 3.889 27 F -0.120 7.120 28 H 0.382 0.618 29 H 0.123 0.877 30 H -0.250 1.250 31 H -0.245 1.245 32 H 0.159 0.841 33 H 0.406 0.594 34 H 0.138 0.862 35 H 0.134 0.866 36 H 0.129 0.871 37 H 0.121 0.879 38 H 0.092 0.908 39 H 0.115 0.885 40 H 0.128 0.872 41 H 0.087 0.913 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.460 1.172 -2.531 2.827 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.183 4.183 3 Si 0.588 3.412 4 C -0.100 4.100 5 C -0.148 4.148 6 C 0.141 3.859 7 F -0.080 7.080 8 C -0.148 4.148 9 C 0.344 3.656 10 O -0.363 6.363 11 N -0.361 5.361 12 C 0.113 3.887 13 C -0.106 4.106 14 C 0.086 3.914 15 F -0.109 7.109 16 C -0.170 4.170 17 C -0.105 4.105 18 C -0.145 4.145 19 C -0.077 4.077 20 C -0.191 4.191 21 C 0.035 3.965 22 H 0.128 0.872 23 F -0.179 7.179 24 C -0.215 4.215 25 C -0.114 4.114 26 C 0.092 3.908 27 F -0.098 7.098 28 H 0.229 0.771 29 H 0.140 0.860 30 H -0.174 1.174 31 H -0.169 1.169 32 H 0.176 0.824 33 H 0.243 0.757 34 H 0.156 0.844 35 H 0.152 0.848 36 H 0.147 0.853 37 H 0.139 0.861 38 H 0.110 0.890 39 H 0.133 0.867 40 H 0.146 0.854 41 H 0.105 0.895 42 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.322 1.871 -2.781 3.603 hybrid contribution -0.296 -1.055 -0.435 1.179 sum 1.026 0.816 -3.216 3.473 Atomic orbital electron populations 1.86601 1.16016 1.81608 1.49200 1.25156 0.86036 1.10768 0.96326 0.94838 0.81529 0.76662 0.88142 1.20542 0.99155 0.92710 0.97617 1.20886 1.01045 1.01056 0.91861 1.17474 0.95175 0.87879 0.85371 1.91670 1.83478 1.77038 1.55821 1.19821 1.06084 0.92550 0.96303 1.17806 0.79189 0.82086 0.86500 1.90972 1.42471 1.65456 1.37444 1.45554 1.64664 1.06263 1.19582 1.19560 0.90591 0.92286 0.86300 1.19378 0.95159 1.01778 0.94246 1.17325 0.90718 0.95192 0.88129 1.91386 1.75581 1.73361 1.70602 1.21134 0.93181 1.01019 1.01675 1.21063 0.99860 0.96224 0.93391 1.21195 0.95680 1.00501 0.97164 1.20754 0.93387 0.94710 0.98832 1.24028 0.97809 0.93543 1.03742 1.23024 0.96482 0.87288 0.89754 0.87191 1.92842 1.94024 1.65746 1.65331 1.24492 0.98556 0.97737 1.00750 1.21184 0.97741 1.01087 0.91379 1.17220 0.98831 0.88874 0.85915 1.91592 1.84175 1.78004 1.56054 0.77084 0.86008 1.17432 1.16948 0.82353 0.75739 0.84396 0.84810 0.85317 0.86119 0.88953 0.86689 0.85434 0.89456 0.83108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.73 12.88 -35.23 -0.45 0.27 16 2 C -0.07 0.15 2.44 36.00 0.09 0.23 16 3 Si 0.69 -2.00 29.90 -169.99 -5.08 -7.08 16 4 C -0.10 0.20 5.27 -104.49 -0.55 -0.35 16 5 C -0.13 0.33 8.62 -39.57 -0.34 -0.01 16 6 C 0.16 -0.08 7.28 -38.97 -0.28 -0.36 16 7 F -0.10 -0.20 15.55 2.25 0.04 -0.16 16 8 C -0.14 0.16 5.88 -104.92 -0.62 -0.46 16 9 C 0.56 0.18 5.75 -12.40 -0.07 0.11 16 10 O -0.49 -1.94 12.81 5.30 0.07 -1.87 16 11 N -0.71 1.41 4.74 -48.90 -0.23 1.18 16 12 C 0.20 -0.06 1.03 -132.15 -0.14 -0.20 16 13 C -0.10 -0.16 4.52 -104.56 -0.47 -0.63 16 14 C 0.11 0.22 6.73 -39.42 -0.27 -0.05 16 15 F -0.13 -0.33 12.95 2.25 0.03 -0.30 16 16 C -0.15 -0.16 10.03 -39.51 -0.40 -0.56 16 17 C -0.09 -0.03 10.04 -39.59 -0.40 -0.42 16 18 C -0.13 -0.10 10.04 -39.58 -0.40 -0.49 16 19 C -0.06 -0.08 7.51 -39.59 -0.30 -0.38 16 20 C -0.15 0.23 6.95 -25.91 -0.18 0.05 16 21 C 0.07 -0.04 5.58 -25.92 -0.14 -0.19 16 22 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 23 F -0.20 -0.52 17.41 2.25 0.04 -0.48 16 24 C -0.18 -0.12 6.97 -25.92 -0.18 -0.30 16 25 C -0.09 0.26 9.52 -39.11 -0.37 -0.11 16 26 C 0.11 -0.16 7.23 -39.49 -0.29 -0.44 16 27 F -0.12 -0.04 16.73 2.25 0.04 0.00 16 28 H 0.38 -2.13 8.70 45.56 0.40 -1.73 16 29 H 0.12 -0.16 7.89 -51.93 -0.41 -0.57 16 30 H -0.25 0.14 7.11 56.52 0.40 0.54 16 31 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 32 H 0.16 -0.77 5.10 -52.49 -0.27 -1.04 16 33 H 0.41 -2.06 6.66 -40.82 -0.27 -2.33 16 34 H 0.14 -0.08 8.06 -52.49 -0.42 -0.50 16 35 H 0.13 -0.26 8.06 -52.49 -0.42 -0.68 16 36 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 0.09 5.78 -52.49 -0.30 -0.21 16 38 H 0.09 -0.35 8.11 -51.93 -0.42 -0.77 16 39 H 0.11 -0.05 7.07 -51.93 -0.37 -0.42 16 40 H 0.13 0.26 5.09 -51.93 -0.26 0.00 16 41 H 0.09 0.09 8.14 -51.92 -0.42 -0.33 16 42 H 0.15 -0.85 6.40 -52.49 -0.34 -1.19 16 LS Contribution 359.85 15.07 5.42 5.42 Total: 0.00 -8.82 359.85 -9.00 -17.82 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -3.56 Total: -10.24 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -5.30 Total: -4.56 kcal Atomic # 7 Polarization: 1.41 SS G_CDS: -0.23 Total: 1.18 kcal Atomic # 8 Polarization: -1.21 SS G_CDS: -0.39 Total: -1.60 kcal Atomic # 9 Polarization: -1.08 SS G_CDS: 0.14 Total: -0.94 kcal Atomic # 14 Polarization: -2.00 SS G_CDS: -5.08 Total: -7.08 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -8.82 -9.00 -17.82 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.837 kcal (2) G-P(sol) polarization free energy of solvation -8.822 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.658 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.817 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds