Wall clock time and date at job start Tue Mar 9 2021 13:32:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.47292 * 2 1 4 4 C 1.50695 * 109.47230 * 120.00261 * 2 1 3 5 5 C 1.38185 * 119.84230 * 255.02043 * 4 2 1 6 6 C 1.38316 * 120.14790 * 179.76301 * 5 4 2 7 7 F 1.35097 * 120.08495 * 180.25691 * 6 5 4 8 8 C 1.39807 * 119.82677 * 0.46901 * 6 5 4 9 9 C 1.47699 * 120.15355 * 179.79068 * 8 6 5 10 10 O 1.21569 * 119.99911 * 359.71714 * 9 8 6 11 11 N 1.34773 * 119.99893 * 179.72280 * 9 8 6 12 12 C 1.46502 * 119.99833 * 179.97438 * 11 9 8 13 13 C 1.50699 * 112.84763 * 309.66322 * 12 11 9 14 14 C 1.38436 * 120.00926 * 168.80235 * 13 12 11 15 15 F 1.35104 * 120.02854 * 0.02562 * 14 13 12 16 16 C 1.38487 * 119.94649 * 180.27518 * 14 13 12 17 17 C 1.38177 * 119.97478 * 359.47260 * 16 14 13 18 18 C 1.38265 * 120.02212 * 0.55159 * 17 16 14 19 19 C 1.38216 * 120.01501 * 348.82872 * 13 12 11 20 20 C 1.53788 * 113.61441 * 178.46965 * 12 11 9 21 21 C 1.53783 * 87.07897 * 270.79907 * 20 12 11 22 22 H 1.09003 * 113.61262 * 89.11621 * 21 20 12 23 23 F 1.39899 * 113.61249 * 220.01792 * 21 20 12 24 24 C 1.53782 * 87.08225 * 334.56597 * 21 20 12 25 25 C 1.39661 * 119.69310 * 359.51113 * 8 6 5 26 26 C 1.38071 * 119.84869 * 0.25472 * 25 8 6 27 27 F 1.35099 * 119.91546 * 180.02562 * 26 25 8 28 28 H 0.96702 * 113.99682 * 300.00125 * 1 2 3 29 29 H 1.09004 * 109.46930 * 240.00443 * 2 1 3 30 30 H 1.48496 * 109.99869 * 178.68249 * 3 2 1 31 31 H 1.48503 * 109.99654 * 300.00197 * 3 2 1 32 32 H 1.08000 * 119.92757 * 359.97438 * 5 4 2 33 33 H 0.96999 * 120.00535 * 359.97438 * 11 9 8 34 34 H 1.07999 * 120.00836 * 179.75147 * 16 14 13 35 35 H 1.07994 * 119.98832 * 180.29820 * 17 16 14 36 36 H 1.08001 * 119.97583 * 179.72479 * 18 17 16 37 37 H 1.08001 * 119.98647 * 359.95224 * 19 13 12 38 38 H 1.09004 * 113.61333 * 25.34408 * 20 12 11 39 39 H 1.08991 * 113.61398 * 156.25451 * 20 12 11 40 40 H 1.08992 * 113.61631 * 270.88204 * 24 21 20 41 41 H 1.09008 * 113.61084 * 139.98087 * 24 21 20 42 42 H 1.07996 * 120.07409 * 180.27889 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.4527 0.0198 2.2814 6 6 2.9110 -0.6255 3.4157 7 9 3.4157 0.0900 4.4445 8 6 2.8548 -2.0203 3.4929 9 6 3.3465 -2.7170 4.6988 10 8 3.8062 -2.0778 5.6251 11 7 3.2857 -4.0614 4.7722 12 6 3.7740 -4.7525 5.9681 13 6 5.1592 -4.3168 6.3712 14 6 5.6740 -4.6949 7.5994 15 9 4.9352 -5.4549 8.4372 16 6 6.9449 -4.2890 7.9708 17 6 7.7018 -3.5165 7.1108 18 6 7.1863 -3.1392 5.8846 19 6 5.9159 -3.5393 5.5149 20 6 3.6006 -6.2795 5.9111 21 6 2.2128 -6.0664 6.5384 22 1 1.4213 -5.9113 5.8050 23 9 1.8810 -7.0234 7.5034 24 6 2.7679 -4.7606 7.1312 25 6 2.3262 -2.7514 2.4268 26 6 1.8678 -2.0937 1.3027 27 9 1.3557 -2.7995 0.2709 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 3.5346 1.7702 0.0321 31 1 1.5615 2.4679 -1.2085 32 1 2.4992 1.0969 2.2183 33 1 2.9187 -4.5714 4.0333 34 1 7.3459 -4.5800 8.9304 35 1 8.6948 -3.2040 7.3982 36 1 7.7769 -2.5317 5.2148 37 1 5.5146 -3.2446 4.5565 38 1 3.5649 -6.6773 4.8969 39 1 4.2923 -6.8218 6.5556 40 1 3.2320 -4.8876 8.1091 41 1 2.0600 -3.9322 7.1019 42 1 2.2756 -3.8288 2.4818 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:33 Heat of formation + Delta-G solvation = -134.787457 kcal Electronic energy + Delta-G solvation = -36029.942464 eV Core-core repulsion = 30636.722366 eV Total energy + Delta-G solvation = -5393.220099 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.098 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.20317 -50.11454 -50.09229 -48.62454 -42.16468 -40.54314 -39.46215 -38.83735 -37.63124 -34.74647 -33.10681 -32.10799 -31.41964 -31.37894 -28.00126 -27.22993 -26.11602 -24.40231 -24.19873 -23.63249 -22.82587 -22.09847 -20.86121 -19.77947 -18.87100 -18.82485 -18.47872 -18.00228 -17.91230 -17.37614 -17.24677 -17.13618 -16.92105 -16.87791 -16.68091 -16.59606 -16.18056 -16.04085 -15.92274 -15.83804 -15.72708 -15.51275 -15.17256 -14.95957 -14.69544 -14.46305 -14.20506 -14.11807 -13.85817 -13.78388 -13.49660 -13.16509 -13.06518 -12.97847 -12.85822 -12.74873 -12.35815 -12.20649 -12.18122 -11.61336 -11.46363 -11.29415 -10.63302 -10.60731 -10.43907 -9.90339 -9.82712 -9.65294 -5.05714 -0.83233 -0.31346 0.08272 0.20524 1.15469 1.34558 1.58840 1.61755 1.93552 2.19603 2.50376 2.77550 2.81504 3.04321 3.09224 3.12738 3.18510 3.25559 3.29320 3.40489 3.51272 3.54729 3.73353 3.76321 3.79639 3.93075 4.09578 4.15155 4.28516 4.31087 4.32201 4.34541 4.49507 4.53298 4.54674 4.57625 4.69010 4.71289 4.74550 4.79725 4.91710 4.98426 5.06952 5.27048 5.36134 5.37885 5.41422 5.85669 6.19513 6.67694 6.91338 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.546 6.546 2 C -0.078 4.078 3 Si 0.776 3.224 4 C -0.096 4.096 5 C -0.121 4.121 6 C 0.145 3.855 7 F -0.120 7.120 8 C -0.147 4.147 9 C 0.559 3.441 10 O -0.531 6.531 11 N -0.690 5.690 12 C 0.201 3.799 13 C -0.112 4.112 14 C 0.084 3.916 15 F -0.139 7.139 16 C -0.161 4.161 17 C -0.091 4.091 18 C -0.135 4.135 19 C -0.069 4.069 20 C -0.144 4.144 21 C 0.071 3.929 22 H 0.140 0.860 23 F -0.219 7.219 24 C -0.185 4.185 25 C -0.078 4.078 26 C 0.100 3.900 27 F -0.130 7.130 28 H 0.399 0.601 29 H 0.114 0.886 30 H -0.279 1.279 31 H -0.292 1.292 32 H 0.180 0.820 33 H 0.423 0.577 34 H 0.149 0.851 35 H 0.156 0.844 36 H 0.145 0.855 37 H 0.125 0.875 38 H 0.123 0.877 39 H 0.102 0.898 40 H 0.109 0.891 41 H 0.079 0.921 42 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.274 0.807 -3.589 3.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.355 6.355 2 C -0.187 4.187 3 Si 0.680 3.320 4 C -0.097 4.097 5 C -0.139 4.139 6 C 0.124 3.876 7 F -0.099 7.099 8 C -0.151 4.151 9 C 0.347 3.653 10 O -0.408 6.408 11 N -0.344 5.344 12 C 0.114 3.886 13 C -0.114 4.114 14 C 0.065 3.935 15 F -0.117 7.117 16 C -0.180 4.180 17 C -0.108 4.108 18 C -0.153 4.153 19 C -0.088 4.088 20 C -0.182 4.182 21 C 0.035 3.965 22 H 0.157 0.843 23 F -0.199 7.199 24 C -0.224 4.224 25 C -0.097 4.097 26 C 0.080 3.920 27 F -0.108 7.108 28 H 0.250 0.750 29 H 0.132 0.868 30 H -0.205 1.205 31 H -0.219 1.219 32 H 0.197 0.803 33 H 0.263 0.737 34 H 0.167 0.833 35 H 0.174 0.826 36 H 0.163 0.837 37 H 0.143 0.857 38 H 0.142 0.858 39 H 0.120 0.880 40 H 0.127 0.873 41 H 0.098 0.902 42 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges 1.107 1.465 -3.836 4.253 hybrid contribution -0.239 -0.899 -0.143 0.941 sum 0.868 0.565 -3.980 4.112 Atomic orbital electron populations 1.86561 1.16204 1.82114 1.50596 1.25250 0.86039 1.11361 0.96033 0.93830 0.78365 0.74056 0.85753 1.20569 0.98887 0.92705 0.97561 1.20996 1.00046 1.02046 0.90830 1.17756 0.95969 0.88283 0.85562 1.91625 1.83969 1.77485 1.56779 1.19737 1.06741 0.92389 0.96259 1.18001 0.78494 0.82489 0.86338 1.90958 1.44469 1.66400 1.38940 1.45384 1.63825 1.05685 1.19546 1.19500 0.89530 0.93207 0.86397 1.19582 0.96006 1.01693 0.94124 1.17593 0.91331 0.95996 0.88613 1.91366 1.75863 1.73656 1.70862 1.21396 0.93052 1.01100 1.02422 1.21352 1.00727 0.95697 0.93063 1.21495 0.95737 1.00431 0.97662 1.20900 0.93825 0.94903 0.99136 1.23967 0.96683 0.92381 1.05132 1.23298 0.97868 0.85811 0.89531 0.84251 1.92800 1.94233 1.66494 1.66415 1.24459 0.98888 0.98453 1.00562 1.21354 0.95953 1.02400 0.89960 1.17400 0.99367 0.89143 0.86095 1.91571 1.84449 1.78243 1.56586 0.75028 0.86844 1.20478 1.21939 0.80293 0.73703 0.83300 0.82596 0.83747 0.85748 0.85836 0.87953 0.87292 0.90239 0.80149 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.86 12.88 -148.98 -1.92 -0.06 16 2 C -0.08 0.35 2.44 71.23 0.17 0.52 16 3 Si 0.78 -4.67 29.90 68.60 2.05 -2.61 16 4 C -0.10 0.46 5.27 -19.78 -0.10 0.36 16 5 C -0.12 0.69 8.62 22.28 0.19 0.88 16 6 C 0.14 -0.14 7.28 22.67 0.17 0.03 16 7 F -0.12 -0.57 15.55 44.97 0.70 0.13 16 8 C -0.15 0.40 5.88 -20.05 -0.12 0.28 16 9 C 0.56 0.35 5.75 86.74 0.50 0.85 16 10 O -0.53 -4.78 12.81 -3.93 -0.05 -4.83 16 11 N -0.69 3.31 4.74 -426.89 -2.03 1.28 16 12 C 0.20 -0.10 1.03 3.39 0.00 -0.09 16 13 C -0.11 -0.44 4.52 -19.82 -0.09 -0.53 16 14 C 0.08 0.47 6.73 22.38 0.15 0.62 16 15 F -0.14 -0.97 12.95 44.97 0.58 -0.39 16 16 C -0.16 -0.49 10.03 22.31 0.22 -0.26 16 17 C -0.09 -0.07 10.04 22.26 0.22 0.15 16 18 C -0.14 -0.23 10.04 22.27 0.22 -0.01 16 19 C -0.07 -0.23 7.51 22.26 0.17 -0.07 16 20 C -0.14 0.53 6.95 31.12 0.22 0.74 16 21 C 0.07 -0.11 5.58 31.12 0.17 0.06 16 22 H 0.14 -1.07 8.14 -2.39 -0.02 -1.09 16 23 F -0.22 -1.24 17.41 44.97 0.78 -0.45 16 24 C -0.19 -0.45 6.97 31.12 0.22 -0.23 16 25 C -0.08 0.55 9.52 22.57 0.21 0.77 16 26 C 0.10 -0.38 7.23 22.33 0.16 -0.22 16 27 F -0.13 0.04 16.73 44.97 0.75 0.79 16 28 H 0.40 -4.87 8.70 -74.06 -0.64 -5.51 16 29 H 0.11 -0.31 7.89 -2.39 -0.02 -0.33 16 30 H -0.28 0.34 7.11 99.48 0.71 1.05 16 31 H -0.29 -0.54 7.11 99.48 0.71 0.17 16 32 H 0.18 -1.92 5.10 -2.91 -0.01 -1.94 16 33 H 0.42 -5.21 6.66 -92.71 -0.62 -5.83 16 34 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 35 H 0.16 -0.70 8.06 -2.91 -0.02 -0.72 16 36 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 37 H 0.12 0.22 5.78 -2.91 -0.02 0.21 16 38 H 0.12 -1.24 8.11 -2.39 -0.02 -1.26 16 39 H 0.10 -0.05 7.07 -2.39 -0.02 -0.07 16 40 H 0.11 0.69 5.09 -2.39 -0.01 0.68 16 41 H 0.08 0.28 8.14 -2.38 -0.02 0.26 16 42 H 0.18 -2.53 6.40 -2.91 -0.02 -2.54 16 Total: 0.00 -23.15 359.85 3.49 -19.66 By element: Atomic # 1 Polarization: -17.27 SS G_CDS: -0.07 Total: -17.35 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: 2.69 Total: 3.83 kcal Atomic # 7 Polarization: 3.31 SS G_CDS: -2.03 Total: 1.28 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -1.97 Total: -4.89 kcal Atomic # 9 Polarization: -2.74 SS G_CDS: 2.82 Total: 0.08 kcal Atomic # 14 Polarization: -4.67 SS G_CDS: 2.05 Total: -2.61 kcal Total: -23.15 3.49 -19.66 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.126 kcal (2) G-P(sol) polarization free energy of solvation -23.154 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.280 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.492 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.662 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.787 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds