Wall clock time and date at job start Tue Mar 9 2021 13:32:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86306 * 109.47148 * 2 1 4 4 C 1.50698 * 109.46997 * 240.00399 * 2 1 3 5 5 C 1.38639 * 119.94278 * 75.01856 * 4 2 1 6 6 F 1.35094 * 119.87893 * 359.97438 * 5 4 2 7 7 C 1.38674 * 120.23774 * 179.97438 * 5 4 2 8 8 C 1.37825 * 120.12003 * 359.78685 * 7 5 4 9 9 C 1.39672 * 119.87749 * 0.46490 * 8 7 5 10 10 C 1.47726 * 120.11629 * 179.78540 * 9 8 7 11 11 O 1.21567 * 119.99795 * 179.72235 * 10 9 8 12 12 N 1.34773 * 119.99721 * 359.72808 * 10 9 8 13 13 C 1.46504 * 119.99671 * 179.97438 * 12 10 9 14 14 C 1.50698 * 112.84768 * 311.19358 * 13 12 10 15 15 C 1.38440 * 120.01807 * 286.14334 * 14 13 12 16 16 F 1.35102 * 120.02290 * 0.02562 * 15 14 13 17 17 C 1.38482 * 119.94944 * 179.72903 * 15 14 13 18 18 C 1.38166 * 119.97398 * 0.56816 * 17 15 14 19 19 C 1.38272 * 120.02835 * 359.70957 * 18 17 15 20 20 C 1.38214 * 120.04949 * 359.97438 * 19 18 17 21 21 C 1.53780 * 113.61584 * 180.02562 * 13 12 10 22 22 C 1.53785 * 87.07615 * 270.79870 * 21 13 12 23 23 H 1.09000 * 113.61680 * 89.11968 * 22 21 13 24 24 F 1.39906 * 113.61262 * 220.01457 * 22 21 13 25 25 C 1.53779 * 113.69005 * 82.46199 * 13 12 10 26 26 C 1.37858 * 119.93710 * 254.99399 * 4 2 1 27 27 H 0.96703 * 114.00283 * 299.99728 * 1 2 3 28 28 H 1.08997 * 109.47376 * 120.00108 * 2 1 3 29 29 H 1.48496 * 110.00179 * 178.68169 * 3 2 1 30 30 H 1.48501 * 110.00121 * 300.00462 * 3 2 1 31 31 H 1.08003 * 119.93868 * 180.02562 * 7 5 4 32 32 H 1.07996 * 120.05754 * 180.25257 * 8 7 5 33 33 H 0.97000 * 120.00561 * 359.97438 * 12 10 9 34 34 H 1.07997 * 120.00868 * 180.29893 * 17 15 14 35 35 H 1.08008 * 119.98886 * 179.72765 * 18 17 15 36 36 H 1.08001 * 119.97540 * 180.02562 * 19 18 17 37 37 H 1.08002 * 119.99091 * 180.02562 * 20 19 18 38 38 H 1.08990 * 113.61947 * 156.25322 * 21 13 12 39 39 H 1.08999 * 113.61230 * 25.34142 * 21 13 12 40 40 H 1.08995 * 113.61687 * 334.57852 * 25 13 12 41 41 H 1.09002 * 113.61030 * 203.67467 * 25 13 12 42 42 H 1.07996 * 120.06298 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2305 5 6 1.8691 -0.0832 -2.4654 6 9 1.3576 1.1635 -2.5621 7 6 2.3300 -0.7309 -3.6016 8 6 2.8568 -2.0011 -3.5079 9 6 2.9169 -2.6396 -2.2671 10 6 3.4761 -4.0028 -2.1613 11 8 3.5321 -4.5546 -1.0795 12 7 3.9244 -4.6347 -3.2641 13 6 4.4795 -5.9864 -3.1591 14 6 5.5016 -6.1154 -2.0593 15 6 6.7632 -5.5683 -2.2186 16 9 7.0788 -4.9178 -3.3599 17 6 7.6995 -5.6828 -1.2047 18 6 7.3775 -6.3530 -0.0402 19 6 6.1189 -6.9042 0.1156 20 6 5.1815 -6.7848 -0.8930 21 6 4.9464 -6.5668 -4.5045 22 6 3.5183 -7.1113 -4.6755 23 1 2.8412 -6.4137 -5.1685 24 9 3.4708 -8.3968 -5.2255 25 6 3.4119 -7.0931 -3.1410 26 6 2.4521 -1.9824 -1.1261 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5138 0.8899 29 1 3.5345 1.7704 0.0321 30 1 1.5613 2.4680 -1.2084 31 1 2.2797 -0.2377 -4.5611 32 1 3.2192 -2.5030 -4.3928 33 1 3.8795 -4.1945 -4.1274 34 1 8.6824 -5.2521 -1.3260 35 1 8.1090 -6.4463 0.7490 36 1 5.8680 -7.4275 1.0263 37 1 4.1986 -7.2153 -0.7702 38 1 5.7018 -7.3462 -4.4052 39 1 5.2147 -5.8069 -5.2383 40 1 2.4418 -6.7579 -2.7742 41 1 3.7481 -8.0163 -2.6690 42 1 2.5001 -2.4701 -0.1637 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:40 Heat of formation + Delta-G solvation = -96.180377 kcal Electronic energy + Delta-G solvation = -33109.823449 eV Core-core repulsion = 28187.731455 eV Total energy + Delta-G solvation = -4922.091995 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.107 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -50.58786 -49.94696 -48.64807 -42.04169 -40.65829 -39.39658 -38.63516 -37.63829 -34.63177 -32.97544 -32.33807 -31.83439 -31.40256 -27.34001 -27.08496 -26.34040 -24.92741 -23.62930 -23.48571 -22.83434 -21.73653 -20.67516 -19.11944 -19.04512 -18.70731 -18.53789 -18.08642 -17.85959 -17.41224 -17.12506 -17.01135 -16.78075 -16.63413 -16.34586 -16.06669 -15.84292 -15.74069 -15.38718 -15.22410 -15.08489 -15.04845 -14.84473 -14.27840 -14.23680 -14.18139 -13.91757 -13.70090 -13.59094 -13.37073 -13.28955 -13.04791 -12.87033 -12.47996 -12.35723 -12.17504 -11.71676 -11.60489 -11.46803 -11.30294 -10.67957 -10.41302 -10.23633 -9.96291 -9.89304 -9.67844 -5.00524 -0.65425 -0.13358 0.09268 0.23358 1.19782 1.45174 1.60058 1.77924 1.92808 2.40496 2.59636 2.85633 2.99214 3.10002 3.14540 3.20597 3.29816 3.35061 3.44606 3.46542 3.72503 3.76605 3.83973 3.86669 3.97663 4.00917 4.11276 4.22113 4.34092 4.39661 4.48506 4.51304 4.55529 4.58651 4.61067 4.73898 4.75993 4.83579 4.86063 4.91929 4.98406 5.05111 5.13683 5.27570 5.36519 5.43830 5.45703 5.89424 6.27830 6.80074 6.98573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.076 4.076 3 Si 0.754 3.246 4 C -0.136 4.136 5 C 0.100 3.900 6 F -0.126 7.126 7 C -0.154 4.154 8 C -0.042 4.042 9 C -0.152 4.152 10 C 0.565 3.435 11 O -0.543 6.543 12 N -0.693 5.693 13 C 0.197 3.803 14 C -0.119 4.119 15 C 0.091 3.909 16 F -0.142 7.142 17 C -0.172 4.172 18 C -0.088 4.088 19 C -0.138 4.138 20 C -0.059 4.059 21 C -0.147 4.147 22 C 0.069 3.931 23 H 0.136 0.864 24 F -0.218 7.218 25 C -0.160 4.160 26 C -0.021 4.021 27 H 0.406 0.594 28 H 0.098 0.902 29 H -0.304 1.304 30 H -0.265 1.265 31 H 0.171 0.829 32 H 0.177 0.823 33 H 0.418 0.582 34 H 0.145 0.855 35 H 0.154 0.846 36 H 0.147 0.853 37 H 0.134 0.866 38 H 0.105 0.895 39 H 0.110 0.890 40 H 0.087 0.913 41 H 0.106 0.894 42 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.196 0.969 0.845 1.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.186 4.186 3 Si 0.659 3.341 4 C -0.137 4.137 5 C 0.081 3.919 6 F -0.105 7.105 7 C -0.172 4.172 8 C -0.060 4.060 9 C -0.156 4.156 10 C 0.353 3.647 11 O -0.421 6.421 12 N -0.347 5.347 13 C 0.110 3.890 14 C -0.120 4.120 15 C 0.071 3.929 16 F -0.121 7.121 17 C -0.190 4.190 18 C -0.106 4.106 19 C -0.156 4.156 20 C -0.077 4.077 21 C -0.185 4.185 22 C 0.033 3.967 23 H 0.154 0.846 24 F -0.199 7.199 25 C -0.198 4.198 26 C -0.040 4.040 27 H 0.257 0.743 28 H 0.115 0.885 29 H -0.232 1.232 30 H -0.192 1.192 31 H 0.188 0.812 32 H 0.194 0.806 33 H 0.257 0.743 34 H 0.162 0.838 35 H 0.172 0.828 36 H 0.165 0.835 37 H 0.152 0.848 38 H 0.123 0.877 39 H 0.128 0.872 40 H 0.106 0.894 41 H 0.125 0.875 42 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 0.775 0.899 0.564 1.314 hybrid contribution 0.107 0.068 -0.705 0.717 sum 0.882 0.967 -0.141 1.316 Atomic orbital electron populations 1.86443 1.16654 1.82375 1.51635 1.24703 0.86419 1.10893 0.96541 0.95059 0.77702 0.76695 0.84652 1.19595 1.04340 0.95934 0.93843 1.18342 0.97240 0.80804 0.95533 1.91478 1.84789 1.38244 1.95974 1.21451 1.00944 0.96350 0.98491 1.21553 0.93972 0.93173 0.97289 1.20023 1.05338 0.95131 0.95073 1.18171 0.77244 0.85166 0.84089 1.90809 1.55761 1.67443 1.28045 1.45503 1.62625 1.15650 1.10906 1.19573 0.92440 0.82647 0.94332 1.19608 0.92686 1.02208 0.97545 1.17715 0.94454 0.97041 0.83684 1.91463 1.93339 1.79121 1.48182 1.21384 1.00359 1.03215 0.94074 1.21367 0.97310 0.95088 0.96868 1.21520 0.93541 1.00667 0.99914 1.21012 0.99497 0.95828 0.91367 1.23950 0.97479 1.01927 0.95148 1.23287 0.98916 0.80775 0.93674 0.84626 1.92806 1.97479 1.42137 1.87454 1.24077 1.00259 0.99443 0.96069 1.21074 0.92121 0.91194 0.99618 0.74257 0.88454 1.23170 1.19199 0.81176 0.80574 0.74260 0.83756 0.82825 0.83524 0.84813 0.87678 0.87209 0.89431 0.87547 0.83475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.72 12.86 -148.98 -1.92 -2.63 16 2 C -0.08 -0.08 2.79 71.24 0.20 0.12 16 3 Si 0.75 0.45 30.77 68.60 2.11 2.56 16 4 C -0.14 -0.66 4.81 -19.86 -0.10 -0.76 16 5 C 0.10 0.52 6.67 22.47 0.15 0.67 16 6 F -0.13 -1.08 12.83 44.97 0.58 -0.50 16 7 C -0.15 0.14 10.01 22.28 0.22 0.36 16 8 C -0.04 0.16 9.54 22.52 0.21 0.37 16 9 C -0.15 -0.21 5.87 -20.09 -0.12 -0.33 16 10 C 0.57 1.56 7.53 86.75 0.65 2.22 16 11 O -0.54 -4.85 13.96 -3.93 -0.05 -4.90 16 12 N -0.69 1.92 5.17 -426.88 -2.21 -0.28 16 13 C 0.20 -0.19 0.64 3.38 0.00 -0.19 16 14 C -0.12 -0.38 3.81 -19.82 -0.08 -0.46 16 15 C 0.09 0.41 7.10 22.38 0.16 0.57 16 16 F -0.14 -0.66 16.14 44.97 0.73 0.06 16 17 C -0.17 -0.47 10.03 22.31 0.22 -0.25 16 18 C -0.09 -0.06 10.04 22.26 0.22 0.17 16 19 C -0.14 -0.19 10.04 22.27 0.22 0.04 16 20 C -0.06 -0.19 7.58 22.26 0.17 -0.02 16 21 C -0.15 0.52 6.32 31.12 0.20 0.71 16 22 C 0.07 -0.22 5.58 31.14 0.17 -0.05 16 23 H 0.14 -1.11 8.14 -2.39 -0.02 -1.13 16 24 F -0.22 -0.75 17.41 44.97 0.78 0.03 16 25 C -0.16 0.23 6.33 31.14 0.20 0.43 16 26 C -0.02 -0.08 9.21 22.52 0.21 0.12 16 27 H 0.41 -3.77 8.74 -74.06 -0.65 -4.42 16 28 H 0.10 -0.29 7.77 -2.39 -0.02 -0.31 16 29 H -0.30 -2.24 7.11 99.48 0.71 -1.54 16 30 H -0.27 -1.93 5.33 99.48 0.53 -1.40 16 31 H 0.17 -1.01 8.06 -2.91 -0.02 -1.04 16 32 H 0.18 -2.14 6.40 -2.91 -0.02 -2.16 16 33 H 0.42 -3.85 6.66 -92.71 -0.62 -4.47 16 34 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 35 H 0.15 -0.67 8.06 -2.91 -0.02 -0.70 16 36 H 0.15 -0.40 8.06 -2.91 -0.02 -0.43 16 37 H 0.13 0.28 6.83 -2.91 -0.02 0.26 16 38 H 0.10 -0.16 8.09 -2.39 -0.02 -0.18 16 39 H 0.11 -0.77 8.12 -2.39 -0.02 -0.79 16 40 H 0.09 -0.07 8.14 -2.39 -0.02 -0.09 16 41 H 0.11 -0.10 7.25 -2.39 -0.02 -0.11 16 42 H 0.15 0.57 7.58 -2.91 -0.02 0.55 16 Total: 0.00 -22.60 361.44 2.65 -19.94 By element: Atomic # 1 Polarization: -17.71 SS G_CDS: -0.30 Total: -18.00 kcal Atomic # 6 Polarization: 0.80 SS G_CDS: 2.93 Total: 3.73 kcal Atomic # 7 Polarization: 1.92 SS G_CDS: -2.21 Total: -0.28 kcal Atomic # 8 Polarization: -5.57 SS G_CDS: -1.97 Total: -7.54 kcal Atomic # 9 Polarization: -2.49 SS G_CDS: 2.09 Total: -0.41 kcal Atomic # 14 Polarization: 0.45 SS G_CDS: 2.11 Total: 2.56 kcal Total: -22.60 2.65 -19.94 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.236 kcal (2) G-P(sol) polarization free energy of solvation -22.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.831 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.945 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.180 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds