Wall clock time and date at job start Tue Mar 9 2021 13:33:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.46946 * 2 1 4 4 C 1.50696 * 109.47617 * 119.99934 * 2 1 3 5 5 C 1.38356 * 120.34988 * 64.99751 * 4 2 1 6 6 C 1.40017 * 118.29473 * 179.97438 * 5 4 2 7 7 C 1.47836 * 120.56448 * 180.02562 * 6 5 4 8 8 O 1.21560 * 119.99803 * 0.02562 * 7 6 5 9 9 N 1.34775 * 120.00150 * 179.97438 * 7 6 5 10 10 C 1.46505 * 119.99870 * 180.02562 * 9 7 6 11 11 C 1.50698 * 112.90724 * 48.74484 * 10 9 7 12 12 C 1.38438 * 120.01037 * 191.24868 * 11 10 9 13 13 F 1.35108 * 120.02776 * 0.02889 * 12 11 10 14 14 C 1.38479 * 119.94831 * 180.02562 * 12 11 10 15 15 C 1.38176 * 119.97533 * 0.02562 * 14 12 11 16 16 C 1.38263 * 120.02340 * 359.97438 * 15 14 12 17 17 C 1.38214 * 120.01417 * 10.98211 * 11 10 9 18 18 C 1.53781 * 113.61146 * 277.49476 * 10 9 7 19 19 C 1.54049 * 87.08031 * 270.88055 * 18 10 9 20 20 H 1.09000 * 113.61076 * 89.06984 * 19 18 10 21 21 F 1.39898 * 113.70062 * 220.05329 * 19 18 10 22 22 C 1.53781 * 113.61334 * 179.97438 * 10 9 7 23 23 C 1.39521 * 118.87722 * 0.27637 * 6 5 4 24 24 N 1.31701 * 120.57046 * 359.40854 * 23 6 5 25 25 C 1.31928 * 121.87104 * 0.63141 * 24 23 6 26 26 H 0.96702 * 114.00222 * 299.99835 * 1 2 3 27 27 H 1.09004 * 109.47121 * 240.00421 * 2 1 3 28 28 H 1.48504 * 109.99888 * 299.99827 * 3 2 1 29 29 H 1.48498 * 110.00354 * 61.31965 * 3 2 1 30 30 H 1.08004 * 120.85145 * 0.02562 * 5 4 2 31 31 H 0.96995 * 119.99909 * 359.97438 * 9 7 6 32 32 H 1.08008 * 120.01488 * 179.97438 * 14 12 11 33 33 H 1.08004 * 119.98509 * 179.97438 * 15 14 12 34 34 H 1.08001 * 119.97581 * 180.02562 * 16 15 14 35 35 H 1.08000 * 119.98764 * 359.97438 * 17 11 10 36 36 H 1.09005 * 113.61471 * 25.43638 * 18 10 9 37 37 H 1.08996 * 113.61178 * 156.24980 * 18 10 9 38 38 H 1.09002 * 113.61445 * 203.66333 * 22 10 9 39 39 H 1.09002 * 113.61408 * 334.48063 * 22 10 9 40 40 H 1.08008 * 119.71640 * 179.72838 * 23 6 5 41 41 H 1.08006 * 119.45586 * 179.67795 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6888 -2.0611 1.4059 6 6 2.1758 -2.6779 2.5647 7 6 1.9458 -4.1187 2.8028 8 8 1.3297 -4.7785 1.9887 9 7 2.4201 -4.7009 3.9220 10 6 2.1927 -6.1289 4.1576 11 6 2.5392 -6.9827 2.9651 12 6 2.1671 -8.3158 2.9365 13 9 1.4926 -8.8520 3.9771 14 6 2.4866 -9.0993 1.8403 15 6 3.1768 -8.5500 0.7767 16 6 3.5479 -7.2184 0.8065 17 6 3.2238 -6.4337 1.8973 18 6 0.8124 -6.4417 4.7591 19 6 1.4626 -6.2623 6.1440 20 1 1.4327 -5.2362 6.5107 21 9 1.0284 -7.1930 7.0940 22 6 2.7965 -6.6394 5.4766 23 6 2.8772 -1.9085 3.4935 24 7 3.0880 -0.6264 3.2785 25 6 2.6407 -0.0188 2.1963 26 1 -0.3934 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8901 28 1 1.5614 2.4679 -1.2086 29 1 1.5879 2.4586 1.2242 30 1 1.1385 -2.6255 0.6675 31 1 2.9127 -4.1746 4.5710 32 1 2.1972 -10.1396 1.8169 33 1 3.4264 -9.1610 -0.0782 34 1 4.0870 -6.7897 -0.0254 35 1 3.5100 -5.3925 1.9174 36 1 0.0562 -5.6905 4.5309 37 1 0.4714 -7.4584 4.5638 38 1 2.9983 -7.7105 5.4787 39 1 3.6429 -6.0485 5.8269 40 1 3.2551 -2.3695 4.3942 41 1 2.8315 1.0357 2.0619 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17636826_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:33:34 Heat of formation + Delta-G solvation = -40.040613 kcal Electronic energy + Delta-G solvation = -30738.236034 eV Core-core repulsion = 26222.606507 eV Total energy + Delta-G solvation = -4515.629527 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.112 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -50.07654 -48.52669 -42.36723 -41.36806 -39.48640 -38.82908 -38.15851 -34.72781 -33.89138 -33.02433 -32.04421 -31.37609 -27.44285 -27.25455 -26.76111 -25.43364 -24.00943 -23.67135 -22.87009 -22.00068 -20.86063 -19.46108 -18.78988 -18.22387 -18.12559 -17.96323 -17.73708 -17.16196 -17.11516 -16.80399 -16.63166 -16.60511 -16.20155 -16.03972 -15.84912 -15.72550 -15.07516 -14.98388 -14.76732 -14.51972 -14.35614 -14.31365 -14.02004 -13.79816 -13.55035 -13.52150 -12.98047 -12.90198 -12.84626 -12.74618 -12.18018 -12.14927 -11.61654 -11.49661 -11.43934 -11.16710 -10.81607 -10.66843 -10.55506 -10.42268 -9.81351 -9.59369 -5.14217 -0.70723 -0.13485 0.13623 0.26856 1.04439 1.40647 1.54791 1.60646 1.81332 2.47704 2.55133 2.88087 3.00681 3.10353 3.14951 3.21813 3.24105 3.28853 3.41942 3.48090 3.54072 3.63056 3.63802 3.80656 3.89744 3.97691 4.06565 4.10066 4.28804 4.36124 4.36987 4.43264 4.50012 4.51435 4.70459 4.75916 4.78069 4.81972 4.92264 5.03347 5.08185 5.18227 5.29331 5.38519 5.45604 5.88943 6.09818 6.18942 6.51311 6.88495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.071 4.071 3 Si 0.686 3.314 4 C -0.176 4.176 5 C 0.014 3.986 6 C -0.190 4.190 7 C 0.563 3.437 8 O -0.505 6.505 9 N -0.708 5.708 10 C 0.200 3.800 11 C -0.104 4.104 12 C 0.106 3.894 13 F -0.131 7.131 14 C -0.153 4.153 15 C -0.087 4.087 16 C -0.129 4.129 17 C -0.055 4.055 18 C -0.178 4.178 19 C 0.070 3.930 20 H 0.111 0.889 21 F -0.199 7.199 22 C -0.153 4.153 23 C 0.140 3.860 24 N -0.476 5.476 25 C 0.129 3.871 26 H 0.377 0.623 27 H 0.125 0.875 28 H -0.250 1.250 29 H -0.255 1.255 30 H 0.153 0.847 31 H 0.406 0.594 32 H 0.138 0.862 33 H 0.134 0.866 34 H 0.129 0.871 35 H 0.122 0.878 36 H 0.086 0.914 37 H 0.127 0.873 38 H 0.114 0.886 39 H 0.093 0.907 40 H 0.161 0.839 41 H 0.164 0.836 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.993 2.706 -0.454 5.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.586 3.414 4 C -0.179 4.179 5 C -0.012 4.012 6 C -0.195 4.195 7 C 0.350 3.650 8 O -0.380 6.380 9 N -0.361 5.361 10 C 0.112 3.888 11 C -0.106 4.106 12 C 0.086 3.914 13 F -0.110 7.110 14 C -0.171 4.171 15 C -0.105 4.105 16 C -0.147 4.147 17 C -0.074 4.074 18 C -0.216 4.216 19 C 0.034 3.966 20 H 0.128 0.872 21 F -0.179 7.179 22 C -0.191 4.191 23 C -0.019 4.019 24 N -0.184 5.184 25 C -0.027 4.027 26 H 0.225 0.775 27 H 0.143 0.857 28 H -0.174 1.174 29 H -0.179 1.179 30 H 0.170 0.830 31 H 0.243 0.757 32 H 0.156 0.844 33 H 0.152 0.848 34 H 0.147 0.853 35 H 0.140 0.860 36 H 0.104 0.896 37 H 0.145 0.855 38 H 0.133 0.867 39 H 0.111 0.889 40 H 0.178 0.822 41 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 4.845 3.208 -0.908 5.881 hybrid contribution -1.465 -0.486 0.450 1.608 sum 3.380 2.722 -0.458 4.364 Atomic orbital electron populations 1.86656 1.17188 1.79912 1.49343 1.24996 0.84300 1.11246 0.97620 0.95046 0.91349 0.73929 0.81042 1.21371 1.02004 0.95320 0.99174 1.21637 0.91485 0.93276 0.94842 1.20980 1.05290 0.94726 0.98551 1.17994 0.79191 0.86439 0.81415 1.90910 1.38825 1.63885 1.44335 1.45581 1.58376 1.08754 1.23395 1.19550 0.97295 0.79924 0.91993 1.19367 1.01998 0.92060 0.97147 1.17333 0.96799 0.91281 0.85977 1.91386 1.77406 1.86152 1.56016 1.21127 1.01859 1.00798 0.93362 1.21063 0.96408 0.95319 0.97743 1.21196 1.00855 0.94064 0.98605 1.20778 0.95244 0.99268 0.92076 1.24543 0.96739 1.06671 0.93661 1.23081 0.95128 0.92113 0.86257 0.87174 1.92840 1.90624 1.67788 1.66695 1.24033 0.97922 1.04604 0.92564 1.23049 0.92039 0.89607 0.97188 1.67758 1.19436 1.10401 1.20768 1.22989 0.91226 1.00217 0.88305 0.77477 0.85746 1.17450 1.17950 0.82952 0.75733 0.84430 0.84836 0.85321 0.86015 0.89582 0.85494 0.86741 0.88892 0.82207 0.81921 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.06 12.84 -35.23 -0.45 -0.39 16 2 C -0.07 0.14 2.82 36.00 0.10 0.24 16 3 Si 0.69 -1.90 29.91 -169.99 -5.08 -6.99 16 4 C -0.18 0.26 5.35 -104.54 -0.56 -0.30 16 5 C 0.01 0.00 9.38 -38.87 -0.36 -0.37 16 6 C -0.19 0.16 5.89 -104.83 -0.62 -0.46 16 7 C 0.56 0.11 5.75 -12.33 -0.07 0.04 16 8 O -0.51 -1.87 13.68 5.31 0.07 -1.80 16 9 N -0.71 1.45 4.79 -48.86 -0.23 1.21 16 10 C 0.20 -0.06 1.06 -132.16 -0.14 -0.20 16 11 C -0.10 -0.16 4.52 -104.56 -0.47 -0.63 16 12 C 0.11 0.22 6.73 -39.42 -0.27 -0.04 16 13 F -0.13 -0.34 12.95 2.25 0.03 -0.31 16 14 C -0.15 -0.17 10.03 -39.52 -0.40 -0.56 16 15 C -0.09 -0.02 10.04 -39.59 -0.40 -0.42 16 16 C -0.13 -0.08 10.04 -39.58 -0.40 -0.48 16 17 C -0.06 -0.07 7.41 -39.59 -0.29 -0.37 16 18 C -0.18 -0.14 6.99 -25.78 -0.18 -0.32 16 19 C 0.07 -0.04 5.59 -25.74 -0.14 -0.18 16 20 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 21 F -0.20 -0.54 17.41 2.25 0.04 -0.50 16 22 C -0.15 0.23 6.94 -25.88 -0.18 0.05 16 23 C 0.14 -0.27 10.71 -17.13 -0.18 -0.46 16 24 N -0.48 0.20 10.35 -12.90 -0.13 0.07 16 25 C 0.13 -0.19 9.84 -17.47 -0.17 -0.36 16 26 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 27 H 0.12 -0.34 7.96 -51.93 -0.41 -0.75 16 28 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 29 H -0.25 0.27 7.01 56.52 0.40 0.67 16 30 H 0.15 0.06 7.74 -52.48 -0.41 -0.34 16 31 H 0.41 -2.08 6.70 -40.82 -0.27 -2.35 16 32 H 0.14 -0.07 8.06 -52.48 -0.42 -0.49 16 33 H 0.13 -0.26 8.06 -52.48 -0.42 -0.68 16 34 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 35 H 0.12 0.08 5.67 -52.49 -0.30 -0.22 16 36 H 0.09 0.11 8.14 -51.93 -0.42 -0.32 16 37 H 0.13 0.27 5.09 -51.93 -0.26 0.01 16 38 H 0.11 -0.05 7.07 -51.93 -0.37 -0.42 16 39 H 0.09 -0.36 8.12 -51.93 -0.42 -0.78 16 40 H 0.16 -0.83 6.42 -52.48 -0.34 -1.17 16 41 H 0.16 -0.54 4.85 -52.48 -0.25 -0.80 16 LS Contribution 343.92 15.07 5.18 5.18 Total: 0.00 -8.52 343.92 -9.27 -17.79 By element: Atomic # 1 Polarization: -5.50 SS G_CDS: -3.96 Total: -9.46 kcal Atomic # 6 Polarization: -0.08 SS G_CDS: -4.73 Total: -4.81 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.37 Total: 1.28 kcal Atomic # 8 Polarization: -1.81 SS G_CDS: -0.38 Total: -2.19 kcal Atomic # 9 Polarization: -0.88 SS G_CDS: 0.07 Total: -0.81 kcal Atomic # 14 Polarization: -1.90 SS G_CDS: -5.08 Total: -6.99 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -8.52 -9.27 -17.79 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.252 kcal (2) G-P(sol) polarization free energy of solvation -8.520 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.269 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.789 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.041 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds