Wall clock time and date at job start Tue Mar 9 2021 13:33:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.46946 * 2 1 4 4 C 1.50696 * 109.47617 * 119.99934 * 2 1 3 5 5 C 1.38356 * 120.34988 * 64.99751 * 4 2 1 6 6 C 1.40017 * 118.29473 * 179.97438 * 5 4 2 7 7 C 1.47836 * 120.56448 * 180.02562 * 6 5 4 8 8 O 1.21560 * 119.99803 * 0.02562 * 7 6 5 9 9 N 1.34775 * 120.00150 * 179.97438 * 7 6 5 10 10 C 1.46505 * 119.99870 * 180.02562 * 9 7 6 11 11 C 1.50698 * 112.90724 * 48.74484 * 10 9 7 12 12 C 1.38438 * 120.01037 * 191.24868 * 11 10 9 13 13 F 1.35108 * 120.02776 * 0.02889 * 12 11 10 14 14 C 1.38479 * 119.94831 * 180.02562 * 12 11 10 15 15 C 1.38176 * 119.97533 * 0.02562 * 14 12 11 16 16 C 1.38263 * 120.02340 * 359.97438 * 15 14 12 17 17 C 1.38214 * 120.01417 * 10.98211 * 11 10 9 18 18 C 1.53781 * 113.61146 * 277.49476 * 10 9 7 19 19 C 1.54049 * 87.08031 * 270.88055 * 18 10 9 20 20 H 1.09000 * 113.61076 * 89.06984 * 19 18 10 21 21 F 1.39898 * 113.70062 * 220.05329 * 19 18 10 22 22 C 1.53781 * 113.61334 * 179.97438 * 10 9 7 23 23 C 1.39521 * 118.87722 * 0.27637 * 6 5 4 24 24 N 1.31701 * 120.57046 * 359.40854 * 23 6 5 25 25 C 1.31928 * 121.87104 * 0.63141 * 24 23 6 26 26 H 0.96702 * 114.00222 * 299.99835 * 1 2 3 27 27 H 1.09004 * 109.47121 * 240.00421 * 2 1 3 28 28 H 1.48504 * 109.99888 * 299.99827 * 3 2 1 29 29 H 1.48498 * 110.00354 * 61.31965 * 3 2 1 30 30 H 1.08004 * 120.85145 * 0.02562 * 5 4 2 31 31 H 0.96995 * 119.99909 * 359.97438 * 9 7 6 32 32 H 1.08008 * 120.01488 * 179.97438 * 14 12 11 33 33 H 1.08004 * 119.98509 * 179.97438 * 15 14 12 34 34 H 1.08001 * 119.97581 * 180.02562 * 16 15 14 35 35 H 1.08000 * 119.98764 * 359.97438 * 17 11 10 36 36 H 1.09005 * 113.61471 * 25.43638 * 18 10 9 37 37 H 1.08996 * 113.61178 * 156.24980 * 18 10 9 38 38 H 1.09002 * 113.61445 * 203.66333 * 22 10 9 39 39 H 1.09002 * 113.61408 * 334.48063 * 22 10 9 40 40 H 1.08008 * 119.71640 * 179.72838 * 23 6 5 41 41 H 1.08006 * 119.45586 * 179.67795 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 1.6888 -2.0611 1.4059 6 6 2.1758 -2.6779 2.5647 7 6 1.9458 -4.1187 2.8028 8 8 1.3297 -4.7785 1.9887 9 7 2.4201 -4.7009 3.9220 10 6 2.1927 -6.1289 4.1576 11 6 2.5392 -6.9827 2.9651 12 6 2.1671 -8.3158 2.9365 13 9 1.4926 -8.8520 3.9771 14 6 2.4866 -9.0993 1.8403 15 6 3.1768 -8.5500 0.7767 16 6 3.5479 -7.2184 0.8065 17 6 3.2238 -6.4337 1.8973 18 6 0.8124 -6.4417 4.7591 19 6 1.4626 -6.2623 6.1440 20 1 1.4327 -5.2362 6.5107 21 9 1.0284 -7.1930 7.0940 22 6 2.7965 -6.6394 5.4766 23 6 2.8772 -1.9085 3.4935 24 7 3.0880 -0.6264 3.2785 25 6 2.6407 -0.0188 2.1963 26 1 -0.3934 0.4417 0.7651 27 1 1.7923 -0.5138 -0.8901 28 1 1.5614 2.4679 -1.2086 29 1 1.5879 2.4586 1.2242 30 1 1.1385 -2.6255 0.6675 31 1 2.9127 -4.1746 4.5710 32 1 2.1972 -10.1396 1.8169 33 1 3.4264 -9.1610 -0.0782 34 1 4.0870 -6.7897 -0.0254 35 1 3.5100 -5.3925 1.9174 36 1 0.0562 -5.6905 4.5309 37 1 0.4714 -7.4584 4.5638 38 1 2.9983 -7.7105 5.4787 39 1 3.6429 -6.0485 5.8269 40 1 3.2551 -2.3695 4.3942 41 1 2.8315 1.0357 2.0619 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_13287814.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:33:33 Heat of formation + Delta-G solvation = -38.803817 kcal Electronic energy + Delta-G solvation = -30738.182403 eV Core-core repulsion = 26222.606507 eV Total energy + Delta-G solvation = -4515.575896 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.112 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.20347 -48.62431 -42.32894 -41.29150 -39.51017 -38.83749 -38.07925 -34.71532 -33.80348 -32.94157 -32.04058 -31.41228 -27.31312 -27.22833 -26.72122 -25.39055 -23.90803 -23.71610 -22.87262 -21.94521 -20.86138 -19.38462 -18.81989 -18.13433 -18.04322 -17.94332 -17.67730 -17.19148 -17.12885 -16.88492 -16.64845 -16.54245 -16.18456 -16.00676 -15.88227 -15.71952 -15.05142 -14.98597 -14.72870 -14.43000 -14.39324 -14.24543 -14.05738 -13.79884 -13.49358 -13.43386 -13.04690 -12.85689 -12.80999 -12.75685 -12.19500 -12.10327 -11.60789 -11.50411 -11.43357 -11.09969 -10.71317 -10.58485 -10.51656 -10.30728 -9.85712 -9.64696 -4.94835 -0.59678 -0.03321 0.08825 0.21735 1.21554 1.56693 1.58539 1.67338 1.95833 2.50460 2.60593 3.03443 3.07561 3.13172 3.19189 3.27434 3.32330 3.38096 3.47921 3.63133 3.64475 3.72494 3.73636 3.79681 3.95297 4.08268 4.11147 4.27075 4.30025 4.35299 4.49289 4.52893 4.55422 4.59072 4.73954 4.79149 4.82569 4.90731 4.94620 4.99221 5.07285 5.27608 5.31411 5.38590 5.42417 5.86419 6.24812 6.40042 6.64921 6.95971 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.081 4.081 3 Si 0.773 3.227 4 C -0.173 4.173 5 C 0.002 3.998 6 C -0.194 4.194 7 C 0.566 3.434 8 O -0.546 6.546 9 N -0.690 5.690 10 C 0.201 3.799 11 C -0.113 4.113 12 C 0.083 3.917 13 F -0.140 7.140 14 C -0.163 4.163 15 C -0.091 4.091 16 C -0.136 4.136 17 C -0.066 4.066 18 C -0.187 4.187 19 C 0.070 3.930 20 H 0.141 0.859 21 F -0.219 7.219 22 C -0.143 4.143 23 C 0.148 3.852 24 N -0.493 5.493 25 C 0.129 3.871 26 H 0.387 0.613 27 H 0.130 0.870 28 H -0.300 1.300 29 H -0.272 1.272 30 H 0.138 0.862 31 H 0.423 0.577 32 H 0.148 0.852 33 H 0.156 0.844 34 H 0.146 0.854 35 H 0.126 0.874 36 H 0.077 0.923 37 H 0.108 0.892 38 H 0.101 0.899 39 H 0.125 0.875 40 H 0.193 0.807 41 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.510 3.677 0.275 7.482 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.190 4.190 3 Si 0.676 3.324 4 C -0.175 4.175 5 C -0.024 4.024 6 C -0.200 4.200 7 C 0.354 3.646 8 O -0.423 6.423 9 N -0.344 5.344 10 C 0.114 3.886 11 C -0.115 4.115 12 C 0.064 3.936 13 F -0.118 7.118 14 C -0.182 4.182 15 C -0.108 4.108 16 C -0.154 4.154 17 C -0.084 4.084 18 C -0.225 4.225 19 C 0.035 3.965 20 H 0.158 0.842 21 F -0.200 7.200 22 C -0.181 4.181 23 C -0.011 4.011 24 N -0.201 5.201 25 C -0.027 4.027 26 H 0.237 0.763 27 H 0.147 0.853 28 H -0.228 1.228 29 H -0.198 1.198 30 H 0.156 0.844 31 H 0.263 0.737 32 H 0.166 0.834 33 H 0.174 0.826 34 H 0.164 0.836 35 H 0.144 0.856 36 H 0.095 0.905 37 H 0.126 0.874 38 H 0.120 0.880 39 H 0.143 0.857 40 H 0.210 0.790 41 H 0.197 0.803 Dipole moment (debyes) X Y Z Total from point charges 6.388 4.170 -0.133 7.630 hybrid contribution -1.990 -0.782 0.153 2.143 sum 4.398 3.388 0.020 5.552 Atomic orbital electron populations 1.86623 1.18307 1.80405 1.50219 1.25253 0.83565 1.12383 0.97807 0.94086 0.89874 0.71167 0.77225 1.21323 1.02046 0.94779 0.99358 1.21636 0.91867 0.93857 0.95058 1.20903 1.06040 0.94138 0.98881 1.18146 0.78494 0.86673 0.81298 1.90896 1.40808 1.64796 1.45833 1.45399 1.57752 1.08164 1.23119 1.19486 0.96701 0.80486 0.91954 1.19573 1.01849 0.92120 0.97916 1.17609 0.97675 0.92003 0.86354 1.91365 1.77724 1.86312 1.56423 1.21388 1.01949 1.01431 0.93393 1.21356 0.95835 0.95545 0.98113 1.21503 1.00692 0.94303 0.98911 1.20927 0.95529 0.99585 0.92347 1.24518 0.97300 1.05347 0.95372 1.23360 0.95111 0.93005 0.85064 0.84195 1.92798 1.90936 1.68832 1.67393 1.23970 0.98509 1.04370 0.91268 1.23497 0.90836 0.89087 0.97642 1.67835 1.20056 1.10998 1.21172 1.23257 0.90564 1.00956 0.87880 0.76314 0.85275 1.22783 1.19785 0.84436 0.73660 0.83391 0.82614 0.83631 0.85608 0.90465 0.87388 0.88027 0.85679 0.78999 0.80277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.26 12.84 -148.98 -1.91 -2.18 16 2 C -0.08 0.30 2.82 71.23 0.20 0.50 16 3 Si 0.77 -4.44 29.91 68.60 2.05 -2.39 16 4 C -0.17 0.53 5.35 -19.81 -0.11 0.42 16 5 C 0.00 0.00 9.38 22.73 0.21 0.21 16 6 C -0.19 0.38 5.89 -20.00 -0.12 0.27 16 7 C 0.57 0.32 5.75 86.78 0.50 0.82 16 8 O -0.55 -4.79 13.68 -3.90 -0.05 -4.85 16 9 N -0.69 3.34 4.79 -426.76 -2.04 1.30 16 10 C 0.20 -0.08 1.06 3.38 0.00 -0.08 16 11 C -0.11 -0.45 4.52 -19.82 -0.09 -0.54 16 12 C 0.08 0.48 6.73 22.37 0.15 0.63 16 13 F -0.14 -1.02 12.95 44.97 0.58 -0.43 16 14 C -0.16 -0.52 10.03 22.31 0.22 -0.29 16 15 C -0.09 -0.07 10.04 22.26 0.22 0.16 16 16 C -0.14 -0.20 10.04 22.27 0.22 0.03 16 17 C -0.07 -0.21 7.41 22.26 0.16 -0.04 16 18 C -0.19 -0.51 6.99 31.21 0.22 -0.29 16 19 C 0.07 -0.10 5.59 31.24 0.17 0.08 16 20 H 0.14 -1.07 8.14 -2.39 -0.02 -1.09 16 21 F -0.22 -1.28 17.41 44.97 0.78 -0.50 16 22 C -0.14 0.52 6.94 31.14 0.22 0.74 16 23 C 0.15 -0.81 10.71 85.02 0.91 0.10 16 24 N -0.49 1.18 10.35 -194.74 -2.01 -0.83 16 25 C 0.13 -0.52 9.84 84.71 0.83 0.32 16 26 H 0.39 -2.07 8.70 -74.06 -0.64 -2.71 16 27 H 0.13 -0.65 7.96 -2.38 -0.02 -0.67 16 28 H -0.30 -0.80 7.11 99.48 0.71 -0.09 16 29 H -0.27 0.80 7.01 99.48 0.70 1.50 16 30 H 0.14 0.37 7.74 -2.91 -0.02 0.35 16 31 H 0.42 -5.27 6.70 -92.71 -0.62 -5.89 16 32 H 0.15 -0.01 8.06 -2.91 -0.02 -0.03 16 33 H 0.16 -0.70 8.06 -2.91 -0.02 -0.73 16 34 H 0.15 -0.40 8.06 -2.91 -0.02 -0.43 16 35 H 0.13 0.20 5.67 -2.91 -0.02 0.18 16 36 H 0.08 0.31 8.14 -2.38 -0.02 0.29 16 37 H 0.11 0.73 5.09 -2.39 -0.01 0.71 16 38 H 0.10 -0.04 7.07 -2.39 -0.02 -0.06 16 39 H 0.12 -1.28 8.12 -2.39 -0.02 -1.30 16 40 H 0.19 -2.54 6.42 -2.91 -0.02 -2.56 16 41 H 0.18 -1.46 4.85 -2.91 -0.01 -1.48 16 Total: 0.00 -22.09 343.92 1.22 -20.86 By element: Atomic # 1 Polarization: -13.88 SS G_CDS: -0.11 Total: -13.99 kcal Atomic # 6 Polarization: -0.93 SS G_CDS: 3.94 Total: 3.02 kcal Atomic # 7 Polarization: 4.52 SS G_CDS: -4.06 Total: 0.46 kcal Atomic # 8 Polarization: -5.06 SS G_CDS: -1.97 Total: -7.03 kcal Atomic # 9 Polarization: -2.30 SS G_CDS: 1.37 Total: -0.93 kcal Atomic # 14 Polarization: -4.44 SS G_CDS: 2.05 Total: -2.39 kcal Total: -22.09 1.22 -20.86 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_13287814.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.939 kcal (2) G-P(sol) polarization free energy of solvation -22.089 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.029 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.865 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.804 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds