Wall clock time and date at job start Tue Mar 9 2021 13:33:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47570 * 2 1 4 4 C 1.50700 * 109.47472 * 120.00336 * 2 1 3 5 5 C 1.38056 * 119.80577 * 65.01521 * 4 2 1 6 6 C 1.38708 * 120.08323 * 179.72227 * 5 4 2 7 7 O 1.35651 * 120.15063 * 180.27896 * 6 5 4 8 8 C 1.40139 * 119.70145 * 0.51377 * 6 5 4 9 9 C 1.47537 * 120.19129 * 179.76944 * 8 6 5 10 10 O 1.21588 * 119.99898 * 359.71865 * 9 8 6 11 11 N 1.34769 * 119.99587 * 179.72413 * 9 8 6 12 12 C 1.46501 * 119.99951 * 179.97438 * 11 9 8 13 13 C 1.50708 * 112.84991 * 50.32950 * 12 11 9 14 14 C 1.38437 * 120.01160 * 189.94438 * 13 12 11 15 15 F 1.35099 * 120.02745 * 0.02562 * 14 13 12 16 16 C 1.38481 * 119.94410 * 180.27909 * 14 13 12 17 17 C 1.38183 * 119.97388 * 359.42064 * 16 14 13 18 18 C 1.38265 * 120.02323 * 0.30257 * 17 16 14 19 19 C 1.38214 * 120.00753 * 9.66912 * 13 12 11 20 20 C 1.53787 * 113.61526 * 279.13552 * 12 11 9 21 21 C 1.53957 * 87.01683 * 270.76720 * 20 12 11 22 22 H 1.09007 * 113.61099 * 89.20217 * 21 20 12 23 23 F 1.39900 * 113.66436 * 220.06466 * 21 20 12 24 24 C 1.53775 * 87.11315 * 334.63650 * 21 20 12 25 25 C 1.39711 * 119.61334 * 359.48855 * 8 6 5 26 26 C 1.37779 * 119.91130 * 0.25956 * 25 8 6 27 27 H 0.96703 * 113.99646 * 299.99682 * 1 2 3 28 28 H 1.09003 * 109.47053 * 239.99827 * 2 1 3 29 29 H 1.48507 * 109.99650 * 300.00490 * 3 2 1 30 30 H 1.48505 * 109.99604 * 61.31730 * 3 2 1 31 31 H 1.08000 * 119.95390 * 0.02562 * 5 4 2 32 32 H 0.96703 * 114.00452 * 270.23983 * 7 6 5 33 33 H 0.97001 * 120.00584 * 359.97438 * 11 9 8 34 34 H 1.08002 * 120.01535 * 179.70304 * 16 14 13 35 35 H 1.07999 * 119.98736 * 180.27371 * 17 16 14 36 36 H 1.08004 * 119.96758 * 179.97438 * 18 17 16 37 37 H 1.08000 * 119.99561 * 359.97438 * 19 13 12 38 38 H 1.08999 * 113.60967 * 25.34783 * 20 12 11 39 39 H 1.08996 * 113.61406 * 156.24824 * 20 12 11 40 40 H 1.09004 * 113.61543 * 270.81136 * 24 21 20 41 41 H 1.08999 * 113.69091 * 139.91990 * 24 21 20 42 42 H 1.07995 * 120.03995 * 180.27235 * 25 8 6 43 43 H 1.07998 * 119.85670 * 179.97438 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2304 5 6 1.6831 -2.0587 1.3938 6 6 2.1479 -2.7196 2.5213 7 8 1.9096 -4.0455 2.6805 8 6 2.8604 -2.0103 3.4975 9 6 3.3553 -2.7014 4.7034 10 8 3.1408 -3.8886 4.8548 11 7 4.0449 -2.0167 5.6372 12 6 4.5358 -2.7028 6.8349 13 6 5.2928 -3.9664 6.5166 14 6 5.6439 -4.8380 7.5333 15 9 5.3077 -4.5567 8.8111 16 6 6.3446 -5.9959 7.2399 17 6 6.6820 -6.2859 5.9317 18 6 6.3258 -5.4174 4.9165 19 6 5.6319 -4.2583 5.2089 20 6 3.4649 -2.8840 7.9236 21 6 3.9015 -1.5118 8.4683 22 1 3.3621 -0.6744 8.0254 23 9 3.9470 -1.4507 9.8653 24 6 5.2699 -1.7761 7.8184 25 6 3.1045 -0.6463 3.3194 26 6 2.6400 -0.0068 2.1909 27 1 -0.3933 0.4417 0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5879 2.4585 1.2243 31 1 1.1306 -2.6004 0.6404 32 1 1.0841 -4.2440 3.1435 33 1 4.2162 -1.0696 5.5163 34 1 6.6232 -6.6743 8.0327 35 1 7.2246 -7.1911 5.7021 36 1 6.5903 -5.6448 3.8944 37 1 5.3539 -3.5809 4.4150 38 1 2.4462 -2.8969 7.5361 39 1 3.6702 -3.7096 8.6049 40 1 5.9696 -2.2983 8.4709 41 1 5.7075 -0.8967 7.3459 42 1 3.6566 -0.0940 4.0653 43 1 2.8288 1.0477 2.0543 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17636826_13422076.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:33:43 Heat of formation + Delta-G solvation = -92.350745 kcal Electronic energy + Delta-G solvation = -33168.936138 eV Core-core repulsion = 28397.781992 eV Total energy + Delta-G solvation = -4771.154146 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.116 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -50.01771 -48.51316 -42.20229 -41.01928 -39.36446 -38.86245 -38.31269 -37.30696 -34.50546 -32.79375 -31.95155 -31.31163 -31.21489 -27.77971 -27.22446 -26.02414 -24.07190 -23.98619 -23.47484 -22.73386 -21.91870 -20.73746 -19.56866 -18.93313 -18.59831 -18.36882 -17.91310 -17.30628 -17.12476 -17.05939 -16.75510 -16.72874 -16.43651 -16.30495 -16.13350 -15.95388 -15.74217 -15.61744 -15.28931 -15.03327 -14.83178 -14.48904 -14.26695 -14.02412 -13.85280 -13.71589 -13.50014 -13.32701 -13.09064 -12.94962 -12.79770 -12.67059 -12.48289 -12.17284 -12.10728 -11.70238 -11.58711 -11.45019 -10.98653 -10.74651 -10.40092 -10.21094 -9.92542 -9.74712 -9.53594 -5.11345 -0.53080 -0.00237 0.19488 0.33120 1.08892 1.42950 1.61997 1.73643 1.82419 2.43384 2.60536 2.98110 3.04106 3.13491 3.21140 3.26104 3.29478 3.34337 3.45590 3.51215 3.63098 3.65623 3.83076 3.87516 3.97895 4.09334 4.14217 4.26404 4.35501 4.41390 4.45801 4.47085 4.53577 4.55158 4.60126 4.78846 4.84901 4.86895 4.98692 4.99639 5.09691 5.10169 5.12871 5.34983 5.41887 5.45995 5.53143 5.95171 6.21274 6.24107 6.61008 7.05928 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.082 4.082 3 Si 0.690 3.310 4 C -0.072 4.072 5 C -0.128 4.128 6 C 0.175 3.825 7 O -0.475 6.475 8 C -0.166 4.166 9 C 0.557 3.443 10 O -0.495 6.495 11 N -0.712 5.712 12 C 0.201 3.799 13 C -0.105 4.105 14 C 0.104 3.896 15 F -0.132 7.132 16 C -0.154 4.154 17 C -0.088 4.088 18 C -0.128 4.128 19 C -0.053 4.053 20 C -0.174 4.174 21 C 0.070 3.930 22 H 0.110 0.890 23 F -0.200 7.200 24 C -0.154 4.154 25 C -0.066 4.066 26 C -0.137 4.137 27 H 0.377 0.623 28 H 0.123 0.877 29 H -0.255 1.255 30 H -0.258 1.258 31 H 0.141 0.859 32 H 0.398 0.602 33 H 0.404 0.596 34 H 0.137 0.863 35 H 0.133 0.867 36 H 0.128 0.872 37 H 0.123 0.877 38 H 0.085 0.915 39 H 0.124 0.876 40 H 0.114 0.886 41 H 0.091 0.909 42 H 0.134 0.866 43 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.382 4.085 -2.340 5.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.332 6.332 2 C -0.191 4.191 3 Si 0.591 3.409 4 C -0.073 4.073 5 C -0.147 4.147 6 C 0.129 3.871 7 O -0.287 6.287 8 C -0.170 4.170 9 C 0.344 3.656 10 O -0.369 6.369 11 N -0.366 5.366 12 C 0.114 3.886 13 C -0.107 4.107 14 C 0.085 3.915 15 F -0.111 7.111 16 C -0.173 4.173 17 C -0.106 4.106 18 C -0.146 4.146 19 C -0.071 4.071 20 C -0.213 4.213 21 C 0.034 3.966 22 H 0.127 0.873 23 F -0.180 7.180 24 C -0.192 4.192 25 C -0.084 4.084 26 C -0.154 4.154 27 H 0.225 0.775 28 H 0.141 0.859 29 H -0.179 1.179 30 H -0.183 1.183 31 H 0.159 0.841 32 H 0.257 0.743 33 H 0.241 0.759 34 H 0.155 0.845 35 H 0.151 0.849 36 H 0.146 0.854 37 H 0.141 0.859 38 H 0.104 0.896 39 H 0.142 0.858 40 H 0.132 0.868 41 H 0.110 0.890 42 H 0.151 0.849 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 2.597 3.680 -2.991 5.406 hybrid contribution -1.528 0.332 0.915 1.812 sum 1.069 4.012 -2.075 4.642 Atomic orbital electron populations 1.86643 1.17263 1.79965 1.49338 1.25164 0.84299 1.11409 0.98239 0.94888 0.91503 0.73983 0.80503 1.20399 0.96589 0.94113 0.96171 1.21371 1.00871 0.93892 0.98567 1.18490 0.93602 0.83497 0.91546 1.84761 1.46199 1.17765 1.79943 1.20379 1.06035 0.94389 0.96169 1.18025 0.78321 0.86857 0.82358 1.90920 1.54898 1.14048 1.77018 1.45624 1.57324 1.13009 1.20628 1.19519 0.94374 0.90562 0.84157 1.19400 1.01509 0.96213 0.93553 1.17337 1.00358 0.95626 0.78201 1.91397 1.89983 1.93418 1.36301 1.21114 1.01066 0.96643 0.98442 1.21059 0.98447 0.99396 0.91695 1.21204 0.99013 0.94579 0.99815 1.20800 0.94715 0.96934 0.94683 1.24452 1.00136 0.98867 0.97805 1.23055 0.97937 0.99350 0.76224 0.87273 1.92838 1.97165 1.97587 1.30442 1.24018 0.97627 1.00144 0.97410 1.21141 0.97411 0.92535 0.97335 1.21005 0.99815 1.00298 0.94308 0.77519 0.85888 1.17947 1.18277 0.84145 0.74281 0.75926 0.84510 0.84897 0.85353 0.85896 0.89627 0.85801 0.86793 0.89003 0.84876 0.84591 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.23 12.83 -35.23 -0.45 -0.22 16 2 C -0.08 0.17 2.79 36.01 0.10 0.27 16 3 Si 0.69 -1.96 29.86 -169.99 -5.08 -7.04 16 4 C -0.07 0.13 5.36 -104.57 -0.56 -0.43 16 5 C -0.13 0.07 9.60 -39.47 -0.38 -0.31 16 6 C 0.18 0.08 6.72 -38.69 -0.26 -0.18 16 7 O -0.48 -0.70 11.58 -40.53 -0.47 -1.17 16 8 C -0.17 0.09 5.89 -104.84 -0.62 -0.53 16 9 C 0.56 0.39 5.70 -12.47 -0.07 0.32 16 10 O -0.49 -2.01 12.54 -16.59 -0.21 -2.22 16 11 N -0.71 1.16 4.77 -48.95 -0.23 0.93 16 12 C 0.20 0.01 1.03 -132.15 -0.14 -0.13 16 13 C -0.10 -0.21 4.57 -104.55 -0.48 -0.69 16 14 C 0.10 0.26 6.71 -39.42 -0.26 0.00 16 15 F -0.13 -0.38 12.94 2.25 0.03 -0.35 16 16 C -0.15 -0.24 10.03 -39.51 -0.40 -0.63 16 17 C -0.09 -0.08 10.04 -39.59 -0.40 -0.48 16 18 C -0.13 -0.19 10.04 -39.58 -0.40 -0.59 16 19 C -0.05 -0.11 7.48 -39.60 -0.30 -0.41 16 20 C -0.17 -0.17 6.98 -25.82 -0.18 -0.35 16 21 C 0.07 -0.03 5.58 -25.83 -0.14 -0.17 16 22 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 23 F -0.20 -0.56 17.41 2.25 0.04 -0.52 16 24 C -0.15 0.19 6.94 -25.92 -0.18 0.01 16 25 C -0.07 0.20 9.54 -39.20 -0.37 -0.18 16 26 C -0.14 0.41 8.64 -39.63 -0.34 0.07 16 27 H 0.38 -1.28 8.70 45.56 0.40 -0.88 16 28 H 0.12 -0.31 7.96 -51.93 -0.41 -0.73 16 29 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 30 H -0.26 0.34 7.00 56.52 0.40 0.73 16 31 H 0.14 -0.09 8.06 -52.49 -0.42 -0.51 16 32 H 0.40 -0.71 9.06 45.56 0.41 -0.29 16 33 H 0.40 -1.90 6.66 -40.82 -0.27 -2.17 16 34 H 0.14 -0.01 8.06 -52.49 -0.42 -0.44 16 35 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 36 H 0.13 -0.01 8.06 -52.48 -0.42 -0.44 16 37 H 0.12 0.24 5.64 -52.49 -0.30 -0.06 16 38 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 39 H 0.12 0.30 5.20 -51.93 -0.27 0.03 16 40 H 0.11 -0.01 6.96 -51.93 -0.36 -0.37 16 41 H 0.09 -0.33 8.11 -51.93 -0.42 -0.75 16 42 H 0.13 -0.81 6.40 -52.49 -0.34 -1.14 16 43 H 0.14 -0.65 4.81 -52.49 -0.25 -0.91 16 LS Contribution 357.71 15.07 5.39 5.39 Total: 0.00 -9.09 357.71 -9.91 -19.00 By element: Atomic # 1 Polarization: -5.83 SS G_CDS: -3.55 Total: -9.38 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -5.37 Total: -4.41 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.23 Total: 0.93 kcal Atomic # 8 Polarization: -2.48 SS G_CDS: -1.13 Total: -3.61 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.07 Total: -0.88 kcal Atomic # 14 Polarization: -1.96 SS G_CDS: -5.08 Total: -7.04 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -9.09 -9.91 -19.00 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_13422076.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.353 kcal (2) G-P(sol) polarization free energy of solvation -9.091 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.907 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.998 kcal (6) G-S(sol) free energy of system = (1) + (5) -92.351 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds