Wall clock time and date at job start Tue Mar 9 2021 13:33:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35989 * 117.00593 * 2 1 4 4 C 1.38559 * 120.06289 * 0.27790 * 3 2 1 5 5 C 1.38276 * 120.01795 * 180.25067 * 4 3 2 6 6 C 1.50703 * 119.92271 * 179.72400 * 5 4 3 7 7 O 1.42896 * 109.47055 * 299.72750 * 6 5 4 8 8 Si 1.86304 * 109.46911 * 179.72642 * 6 5 4 9 9 C 1.38208 * 120.15614 * 359.45053 * 5 4 3 10 10 C 1.38387 * 120.12893 * 0.29551 * 9 5 4 11 11 Cl 1.73598 * 120.00692 * 179.97438 * 10 9 5 12 12 C 1.38615 * 119.97911 * 359.97438 * 10 9 5 13 13 O 1.36023 * 120.07490 * 180.02562 * 12 10 9 14 14 C 1.42899 * 117.00068 * 90.00040 * 13 12 10 15 15 C 1.52997 * 109.46872 * 270.00034 * 14 13 12 16 16 C 1.50699 * 109.47004 * 149.99816 * 14 13 12 17 17 O 1.21286 * 120.00440 * 5.00017 * 16 14 13 18 18 N 1.34781 * 119.99861 * 185.00066 * 16 14 13 19 19 C 1.46500 * 120.00053 * 180.02562 * 18 16 14 20 20 C 1.50706 * 112.84808 * 48.80066 * 19 18 16 21 21 C 1.38440 * 120.01083 * 189.38717 * 20 19 18 22 22 F 1.35097 * 120.02489 * 0.02562 * 21 20 19 23 23 C 1.38480 * 119.94661 * 179.72523 * 21 20 19 24 24 C 1.38178 * 119.97461 * 0.57803 * 23 21 20 25 25 C 1.38266 * 120.02502 * 359.70203 * 24 23 21 26 26 C 1.38220 * 120.01460 * 9.66981 * 20 19 18 27 27 C 1.53774 * 113.61417 * 277.49490 * 19 18 16 28 28 C 1.53779 * 87.08282 * 270.88288 * 27 19 18 29 29 H 1.09001 * 113.69205 * 89.12667 * 28 27 19 30 30 F 1.39893 * 113.61610 * 220.01738 * 28 27 19 31 31 C 1.53781 * 113.61589 * 179.97438 * 19 18 16 32 32 H 1.08994 * 109.47414 * 180.02562 * 1 2 3 33 33 H 1.09008 * 109.46708 * 299.99914 * 1 2 3 34 34 H 1.08999 * 109.47069 * 59.99656 * 1 2 3 35 35 H 1.08003 * 119.99236 * 359.96832 * 4 3 2 36 36 H 1.09002 * 109.47152 * 59.72558 * 6 5 4 37 37 H 0.96703 * 114.00193 * 180.02562 * 7 6 5 38 38 H 1.48501 * 109.99997 * 298.67752 * 8 6 5 39 39 H 1.48495 * 110.00011 * 60.00027 * 8 6 5 40 40 H 1.07994 * 119.93878 * 180.27121 * 9 5 4 41 41 H 1.09001 * 109.47125 * 29.99894 * 14 13 12 42 42 H 1.09001 * 109.47132 * 299.99856 * 15 14 13 43 43 H 1.08992 * 109.47377 * 60.00045 * 15 14 13 44 44 H 1.09005 * 109.46910 * 180.02562 * 15 14 13 45 45 H 0.96999 * 119.99963 * 359.97438 * 18 16 14 46 46 H 1.07999 * 120.01039 * 180.29586 * 23 21 20 47 47 H 1.07993 * 119.98737 * 179.72548 * 24 23 21 48 48 H 1.08000 * 119.97326 * 180.02562 * 25 24 23 49 49 H 1.08001 * 119.98786 * 359.95420 * 26 20 19 50 50 H 1.08996 * 113.61347 * 25.43408 * 27 19 18 51 51 H 1.09003 * 113.61518 * 156.33145 * 27 19 18 52 52 H 1.08996 * 113.61883 * 203.66569 * 31 19 18 53 53 H 1.09001 * 113.61285 * 334.57465 * 31 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2116 0.0000 4 6 1.2933 2.3746 0.0058 5 6 1.9221 3.6061 0.0006 6 6 1.1007 4.8696 0.0006 7 8 0.2767 4.9020 -1.1664 8 14 2.2349 6.3475 0.0013 9 6 3.3021 3.6810 0.0010 10 6 4.0606 2.5235 0.0005 11 17 5.7938 2.6212 0.0003 12 6 3.4360 1.2861 0.0001 13 8 4.1796 0.1471 0.0001 14 6 4.5339 -0.3964 1.2734 15 6 5.8681 0.1983 1.7282 16 6 4.6630 -1.8937 1.1621 17 8 4.5603 -2.4326 0.0804 18 7 4.8928 -2.6340 2.2647 19 6 5.0189 -4.0896 2.1564 20 6 5.9644 -4.5153 1.0628 21 6 6.0481 -5.8487 0.7001 22 9 5.2820 -6.7689 1.3258 23 6 6.9132 -6.2377 -0.3089 24 6 7.7004 -5.2964 -0.9442 25 6 7.6202 -3.9658 -0.5771 26 6 6.7525 -3.5755 0.4256 27 6 3.6684 -4.8244 2.1264 28 6 3.7524 -4.8778 3.6610 29 1 3.3125 -4.0110 4.1541 30 9 3.3166 -6.0911 4.2042 31 6 5.2798 -4.7871 3.5019 32 1 -0.3634 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8901 34 1 -0.3633 0.5139 -0.8899 35 1 0.2147 2.3192 0.0098 36 1 0.4716 4.8939 0.8904 37 1 -0.2805 5.6896 -1.2327 38 1 3.0750 6.3425 1.2258 39 1 3.0980 6.3260 -1.2069 40 1 3.7896 4.6446 0.0013 41 1 3.7601 -0.1515 2.0010 42 1 6.6419 -0.0466 1.0006 43 1 5.7747 1.2812 1.8087 44 1 6.1386 -0.2166 2.6993 45 1 4.9753 -2.2031 3.1297 46 1 6.9758 -7.2769 -0.5960 47 1 8.3784 -5.6002 -1.7281 48 1 8.2356 -3.2308 -1.0746 49 1 6.6902 -2.5358 0.7110 50 1 2.8465 -4.2123 1.7551 51 1 3.7151 -5.8047 1.6521 52 1 5.7670 -5.7571 3.4037 53 1 5.7586 -4.1447 4.2411 There are 80 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 80 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_13428712.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:33:51 Heat of formation + Delta-G solvation = -118.501431 kcal Electronic energy + Delta-G solvation = -45271.694049 eV Core-core repulsion = 39354.311083 eV Total energy + Delta-G solvation = -5917.382966 eV No. of doubly occupied orbitals = 80 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.124 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -50.20359 -48.64506 -42.30101 -41.83025 -40.10917 -39.34250 -39.10159 -38.62958 -37.88185 -37.04265 -34.73959 -33.06593 -32.18769 -31.58402 -31.44398 -31.41155 -28.65615 -27.24925 -26.92151 -26.37714 -25.29210 -23.83789 -23.74233 -23.05610 -22.69401 -21.97574 -20.83882 -19.66751 -18.83375 -18.80312 -18.63185 -18.49670 -18.12517 -17.99799 -17.26259 -17.16112 -17.13235 -16.94072 -16.83457 -16.66437 -16.48740 -16.26635 -16.05261 -15.87593 -15.79076 -15.55245 -15.27930 -14.95804 -14.81202 -14.66068 -14.47051 -14.34432 -14.25745 -14.10227 -14.00579 -13.79601 -13.70270 -13.50008 -13.34194 -13.10232 -12.90250 -12.87515 -12.83666 -12.76889 -12.69978 -12.48269 -12.21172 -12.17002 -11.89746 -11.85670 -11.62793 -11.48341 -11.46248 -10.88190 -10.45337 -10.39942 -9.93937 -9.86383 -9.66804 -9.55930 -4.96523 -0.46864 -0.20080 0.06360 0.19048 0.65969 1.24373 1.35623 1.40194 1.63209 1.95496 2.01283 2.09588 2.48428 2.50056 3.03291 3.11423 3.16187 3.18657 3.23959 3.38321 3.50203 3.53050 3.60267 3.69277 3.71279 3.71839 3.76990 3.84475 3.91391 3.94944 4.00787 4.07953 4.17178 4.25903 4.27305 4.32935 4.38891 4.47149 4.48181 4.53269 4.56224 4.58010 4.59815 4.62480 4.66847 4.71815 4.78202 4.92310 4.95609 4.96241 5.04361 5.05950 5.09468 5.25199 5.37233 5.41156 5.79233 5.84053 6.18499 6.34369 6.87946 7.03113 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.319 6.319 3 C 0.124 3.876 4 C -0.161 4.161 5 C -0.030 4.030 6 C -0.075 4.075 7 O -0.561 6.561 8 Si 0.765 3.235 9 C -0.155 4.155 10 C -0.016 4.016 11 Cl -0.037 7.037 12 C 0.056 3.944 13 O -0.305 6.305 14 C 0.076 3.924 15 C -0.180 4.180 16 C 0.520 3.480 17 O -0.534 6.534 18 N -0.692 5.692 19 C 0.202 3.798 20 C -0.114 4.114 21 C 0.084 3.916 22 F -0.139 7.139 23 C -0.162 4.162 24 C -0.091 4.091 25 C -0.139 4.139 26 C -0.066 4.066 27 C -0.182 4.182 28 C 0.073 3.927 29 H 0.141 0.859 30 F -0.218 7.218 31 C -0.143 4.143 32 H 0.114 0.886 33 H 0.079 0.921 34 H 0.067 0.933 35 H 0.167 0.833 36 H 0.113 0.887 37 H 0.408 0.592 38 H -0.279 1.279 39 H -0.299 1.299 40 H 0.136 0.864 41 H 0.107 0.893 42 H 0.063 0.937 43 H 0.080 0.920 44 H 0.106 0.894 45 H 0.425 0.575 46 H 0.150 0.850 47 H 0.156 0.844 48 H 0.142 0.858 49 H 0.125 0.875 50 H 0.076 0.924 51 H 0.104 0.896 52 H 0.102 0.898 53 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.287 8.280 6.133 10.815 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.232 6.232 3 C 0.077 3.923 4 C -0.179 4.179 5 C -0.031 4.031 6 C -0.185 4.185 7 O -0.372 6.372 8 Si 0.671 3.329 9 C -0.174 4.174 10 C -0.043 4.043 11 Cl -0.007 7.007 12 C 0.010 3.990 13 O -0.221 6.221 14 C 0.017 3.983 15 C -0.237 4.237 16 C 0.306 3.694 17 O -0.409 6.409 18 N -0.348 5.348 19 C 0.114 3.886 20 C -0.116 4.116 21 C 0.065 3.935 22 F -0.118 7.118 23 C -0.181 4.181 24 C -0.108 4.108 25 C -0.157 4.157 26 C -0.084 4.084 27 C -0.221 4.221 28 C 0.038 3.962 29 H 0.158 0.842 30 F -0.199 7.199 31 C -0.181 4.181 32 H 0.133 0.867 33 H 0.098 0.902 34 H 0.085 0.915 35 H 0.184 0.816 36 H 0.130 0.870 37 H 0.260 0.740 38 H -0.206 1.206 39 H -0.227 1.227 40 H 0.153 0.847 41 H 0.125 0.875 42 H 0.082 0.918 43 H 0.098 0.902 44 H 0.125 0.875 45 H 0.264 0.736 46 H 0.168 0.832 47 H 0.174 0.826 48 H 0.159 0.841 49 H 0.142 0.858 50 H 0.095 0.905 51 H 0.122 0.878 52 H 0.120 0.880 53 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges -2.014 7.267 5.143 9.128 hybrid contribution -0.198 -0.608 0.170 0.661 sum -2.212 6.659 5.313 8.802 Atomic orbital electron populations 1.23475 0.75697 1.05823 1.03002 1.86214 1.23888 1.25368 1.87728 1.19356 0.90809 0.86108 0.96054 1.21346 1.01961 0.89778 1.04859 1.19485 0.91896 0.95450 0.96275 1.24744 1.00402 1.00740 0.92593 1.86436 1.59198 1.49753 1.41787 0.94380 0.79120 0.82582 0.76826 1.20734 0.93662 0.96783 1.06189 1.20903 0.86175 0.93174 1.04083 1.98381 1.07793 1.98345 1.96230 1.17694 0.87101 0.85414 1.08805 1.86245 1.69773 1.37811 1.28258 1.22324 1.00207 0.89916 0.85833 1.22622 0.94527 1.03313 1.03243 1.20438 0.75929 0.88805 0.84262 1.90830 1.47988 1.73478 1.28584 1.45391 1.73817 1.04775 1.10843 1.19493 0.93902 0.80661 0.94532 1.19608 0.99650 0.91875 1.00458 1.17586 0.94450 0.85694 0.95812 1.91385 1.73312 1.65819 1.81246 1.21383 0.97678 1.02343 0.96698 1.21341 0.98083 0.92299 0.99112 1.21485 0.99413 0.97063 0.97761 1.20962 0.93602 0.98774 0.95079 1.24378 0.97536 1.03074 0.97106 1.23280 0.95506 0.84463 0.92986 0.84183 1.92797 1.91151 1.48381 1.87550 1.23975 0.96403 1.02863 0.94862 0.86729 0.90225 0.91470 0.81554 0.86963 0.73983 1.20625 1.22656 0.84701 0.87545 0.91761 0.90160 0.87519 0.73597 0.83178 0.82596 0.84061 0.85756 0.90524 0.87765 0.87996 0.85779 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.04 9.81 113.37 1.11 1.08 16 2 O -0.32 -2.00 10.28 -79.56 -0.82 -2.82 16 3 C 0.12 0.75 6.70 22.56 0.15 0.90 16 4 C -0.16 -0.31 8.60 22.36 0.19 -0.12 16 5 C -0.03 -0.06 5.42 -19.86 -0.11 -0.17 16 6 C -0.07 0.33 2.81 71.24 0.20 0.53 16 7 O -0.56 2.31 12.75 -148.98 -1.90 0.41 16 8 Si 0.77 -3.41 29.78 68.60 2.04 -1.37 16 9 C -0.16 -0.75 8.45 22.30 0.19 -0.57 16 10 C -0.02 -0.11 6.24 22.40 0.14 0.03 16 11 Cl -0.04 -0.20 24.90 -2.72 -0.07 -0.27 16 12 C 0.06 0.45 5.56 22.58 0.13 0.58 16 13 O -0.31 -3.06 8.55 -67.42 -0.58 -3.64 16 14 C 0.08 0.17 3.19 29.85 0.10 0.27 16 15 C -0.18 0.40 8.35 71.98 0.60 1.00 16 16 C 0.52 2.49 5.11 87.66 0.45 2.93 16 17 O -0.53 -7.80 13.70 15.94 0.22 -7.58 16 18 N -0.69 1.40 4.81 -423.91 -2.04 -0.64 16 19 C 0.20 0.40 1.07 3.38 0.00 0.40 16 20 C -0.11 -0.78 4.57 -19.82 -0.09 -0.87 16 21 C 0.08 0.67 6.71 22.38 0.15 0.82 16 22 F -0.14 -1.24 12.93 44.97 0.58 -0.65 16 23 C -0.16 -0.88 10.03 22.31 0.22 -0.65 16 24 C -0.09 -0.32 10.04 22.26 0.22 -0.10 16 25 C -0.14 -0.72 10.04 22.27 0.22 -0.50 16 26 C -0.07 -0.45 7.39 22.26 0.16 -0.29 16 27 C -0.18 -0.84 6.98 31.12 0.22 -0.62 16 28 C 0.07 -0.01 5.58 31.14 0.17 0.16 16 29 H 0.14 -0.90 8.14 -2.39 -0.02 -0.92 16 30 F -0.22 -1.45 17.41 44.97 0.78 -0.66 16 31 C -0.14 0.28 6.94 31.14 0.22 0.49 16 32 H 0.11 -0.52 8.14 -2.39 -0.02 -0.54 16 33 H 0.08 -0.55 7.65 -2.38 -0.02 -0.57 16 34 H 0.07 -0.24 7.67 -2.39 -0.02 -0.26 16 35 H 0.17 -0.47 6.30 -2.91 -0.02 -0.49 16 36 H 0.11 -1.15 7.96 -2.39 -0.02 -1.17 16 37 H 0.41 -5.98 8.74 -74.05 -0.65 -6.63 16 38 H -0.28 -0.06 7.11 99.48 0.71 0.64 16 39 H -0.30 -1.29 7.11 99.48 0.71 -0.58 16 40 H 0.14 0.55 4.86 -2.91 -0.01 0.53 16 41 H 0.11 -0.18 7.91 -2.39 -0.02 -0.20 16 42 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 43 H 0.08 -0.10 5.45 -2.39 -0.01 -0.11 16 44 H 0.11 -0.97 7.92 -2.38 -0.02 -0.99 16 45 H 0.42 -4.29 8.42 -92.71 -0.78 -5.07 16 46 H 0.15 0.25 8.06 -2.91 -0.02 0.23 16 47 H 0.16 -0.29 8.06 -2.91 -0.02 -0.31 16 48 H 0.14 0.23 8.06 -2.91 -0.02 0.21 16 49 H 0.12 0.72 5.55 -2.91 -0.02 0.71 16 50 H 0.08 0.47 8.14 -2.39 -0.02 0.45 16 51 H 0.10 0.89 5.25 -2.39 -0.01 0.87 16 52 H 0.10 0.13 6.90 -2.39 -0.02 0.11 16 53 H 0.12 -1.05 8.12 -2.39 -0.02 -1.07 16 Total: 0.00 -29.57 444.36 2.51 -27.05 By element: Atomic # 1 Polarization: -14.78 SS G_CDS: -0.37 Total: -15.15 kcal Atomic # 6 Polarization: 0.67 SS G_CDS: 4.65 Total: 5.32 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -2.04 Total: -0.64 kcal Atomic # 8 Polarization: -10.55 SS G_CDS: -3.08 Total: -13.63 kcal Atomic # 9 Polarization: -2.68 SS G_CDS: 1.36 Total: -1.32 kcal Atomic # 14 Polarization: -3.41 SS G_CDS: 2.04 Total: -1.37 kcal Atomic # 17 Polarization: -0.20 SS G_CDS: -0.07 Total: -0.27 kcal Total: -29.57 2.51 -27.05 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_13428712.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.447 kcal (2) G-P(sol) polarization free energy of solvation -29.565 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.511 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.055 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.501 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.80 seconds