Wall clock time and date at job start Tue Mar 9 2021 13:34:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86306 * 109.46812 * 2 1 4 4 C 1.50698 * 109.47421 * 119.99922 * 2 1 3 5 5 C 1.34849 * 125.89026 * 245.02827 * 4 2 1 6 6 C 1.40896 * 107.41486 * 179.97438 * 5 4 2 7 7 C 1.34847 * 107.41771 * 0.22942 * 6 5 4 8 8 C 1.50696 * 125.89295 * 179.74847 * 7 6 5 9 9 C 1.50699 * 109.47061 * 85.01761 * 8 7 6 10 10 O 1.21278 * 120.00198 * 0.02562 * 9 8 7 11 11 N 1.34783 * 119.99974 * 180.02562 * 9 8 7 12 12 C 1.46503 * 119.99846 * 180.02562 * 11 9 8 13 13 C 1.50697 * 112.85069 * 311.19520 * 12 11 9 14 14 C 1.38434 * 120.01327 * 170.05784 * 13 12 11 15 15 F 1.35101 * 120.02826 * 0.02562 * 14 13 12 16 16 C 1.38482 * 119.94826 * 179.72842 * 14 13 12 17 17 C 1.38177 * 119.97423 * 0.57224 * 16 14 13 18 18 C 1.38267 * 120.02662 * 359.70193 * 17 16 14 19 19 C 1.38222 * 120.04931 * 0.02562 * 18 17 16 20 20 C 1.53786 * 113.61332 * 180.02562 * 12 11 9 21 21 C 1.53784 * 87.07890 * 270.88437 * 20 12 11 22 22 H 1.08991 * 113.61688 * 89.11567 * 21 20 12 23 23 F 1.39905 * 113.61299 * 219.93712 * 21 20 12 24 24 C 1.53773 * 113.61459 * 82.50293 * 12 11 9 25 25 N 1.36338 * 125.88775 * 65.00198 * 4 2 1 26 26 H 0.96703 * 114.00358 * 60.00332 * 1 2 3 27 27 H 1.09002 * 109.47149 * 240.00422 * 2 1 3 28 28 H 1.48490 * 109.99967 * 60.00274 * 3 2 1 29 29 H 1.48503 * 109.99795 * 181.32440 * 3 2 1 30 30 H 1.07996 * 126.29224 * 359.97438 * 5 4 2 31 31 H 1.08002 * 126.28729 * 179.97438 * 6 5 4 32 32 H 1.08996 * 109.47934 * 205.02053 * 8 7 6 33 33 H 1.09001 * 109.47319 * 325.02559 * 8 7 6 34 34 H 0.96998 * 119.99910 * 0.02562 * 11 9 8 35 35 H 1.08005 * 120.01590 * 180.29357 * 16 14 13 36 36 H 1.08002 * 119.98945 * 179.72679 * 17 16 14 37 37 H 1.07994 * 119.97993 * 180.02562 * 18 17 16 38 38 H 1.08001 * 119.98976 * 180.02562 * 19 18 17 39 39 H 1.08995 * 113.61115 * 25.43121 * 20 12 11 40 40 H 1.08995 * 113.61289 * 156.24796 * 20 12 11 41 41 H 1.09003 * 113.61498 * 203.66088 * 24 12 11 42 42 H 1.09001 * 113.61647 * 334.56716 * 24 12 11 43 43 H 0.96999 * 125.64118 * 0.02562 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6297 -0.1485 2.2379 6 6 2.8970 -1.1602 3.1813 7 6 2.3562 -2.3029 2.7120 8 6 2.4028 -3.6469 3.3920 9 6 1.2717 -3.7480 4.3827 10 8 0.5032 -2.8203 4.5225 11 7 1.1142 -4.8695 5.1135 12 6 0.0143 -4.9681 6.0762 13 6 -0.0823 -3.7657 6.9794 14 6 -1.1836 -3.6047 7.8026 15 9 -2.1721 -4.5257 7.7973 16 6 -1.2684 -2.5022 8.6362 17 6 -0.2595 -1.5579 8.6368 18 6 0.8372 -1.7168 7.8099 19 6 0.9256 -2.8198 6.9816 20 6 -0.0272 -6.3084 6.8290 21 6 -0.9106 -6.8337 5.6851 22 1 -0.3452 -7.2704 4.8620 23 9 -1.9599 -7.6518 6.1177 24 6 -1.3262 -5.3728 5.4406 25 7 1.7577 -2.0319 1.5172 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 1.5614 2.4679 1.2084 29 1 3.5345 1.7704 -0.0323 30 1 2.9291 0.8868 2.3086 31 1 3.4393 -1.0430 4.1079 32 1 2.3039 -4.4353 2.6459 33 1 3.3535 -3.7574 3.9136 34 1 1.7291 -5.6114 5.0020 35 1 -2.1248 -2.3780 9.2824 36 1 -0.3275 -0.6957 9.2836 37 1 1.6255 -0.9786 7.8113 38 1 1.7829 -2.9431 6.3365 39 1 0.9421 -6.8026 6.8943 40 1 -0.5402 -6.2542 7.7892 41 1 -2.1956 -5.0633 6.0207 42 1 -1.4055 -5.1119 4.3853 43 1 1.2890 -2.6740 0.9615 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_14644196.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:03 Heat of formation + Delta-G solvation = -38.977318 kcal Electronic energy + Delta-G solvation = -31423.294939 eV Core-core repulsion = 26880.400041 eV Total energy + Delta-G solvation = -4542.894898 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.128 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -50.21450 -48.64583 -42.50944 -41.80613 -39.55294 -38.84822 -37.67659 -34.39887 -33.15275 -32.14681 -32.06351 -31.42669 -29.51042 -27.22962 -26.23163 -25.12275 -23.76454 -23.00361 -22.26964 -21.48976 -21.12721 -20.77012 -18.84293 -18.48704 -18.37891 -18.10960 -17.90136 -17.19905 -17.13168 -16.94365 -16.75989 -16.40603 -15.93588 -15.91560 -15.69107 -15.23722 -15.13633 -14.96597 -14.88055 -14.64741 -14.37221 -14.15046 -14.10198 -13.84381 -13.53177 -13.45471 -13.42119 -13.04032 -12.93234 -12.87304 -12.72668 -12.52457 -12.16895 -12.04875 -11.61076 -11.46719 -11.07209 -10.44098 -10.36109 -9.94803 -9.85431 -9.65996 -9.07363 -4.98431 0.07168 0.20211 0.94530 1.25612 1.52343 1.63250 1.71589 2.04264 2.07316 2.36561 2.50223 3.06256 3.12863 3.17935 3.28253 3.47027 3.47803 3.58505 3.71322 3.75359 3.82110 3.91637 4.03296 4.12258 4.15630 4.25361 4.29051 4.30830 4.33892 4.47585 4.54246 4.55832 4.60356 4.66811 4.72142 4.81335 4.96854 4.97967 5.05282 5.07165 5.14466 5.26206 5.39367 5.46156 5.84780 5.85113 5.97603 6.42180 6.58275 6.83601 7.18975 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.571 6.571 2 C -0.061 4.061 3 Si 0.812 3.188 4 C 0.018 3.982 5 C -0.227 4.227 6 C -0.196 4.196 7 C 0.041 3.959 8 C -0.064 4.064 9 C 0.508 3.492 10 O -0.549 6.549 11 N -0.696 5.696 12 C 0.202 3.798 13 C -0.113 4.113 14 C 0.080 3.920 15 F -0.141 7.141 16 C -0.166 4.166 17 C -0.093 4.093 18 C -0.140 4.140 19 C -0.061 4.061 20 C -0.145 4.145 21 C 0.073 3.927 22 H 0.143 0.857 23 F -0.221 7.221 24 C -0.184 4.184 25 N -0.531 5.531 26 H 0.405 0.595 27 H 0.096 0.904 28 H -0.307 1.307 29 H -0.287 1.287 30 H 0.123 0.877 31 H 0.144 0.856 32 H 0.135 0.865 33 H 0.150 0.850 34 H 0.427 0.573 35 H 0.147 0.853 36 H 0.154 0.846 37 H 0.143 0.857 38 H 0.131 0.869 39 H 0.124 0.876 40 H 0.096 0.904 41 H 0.100 0.900 42 H 0.076 0.924 43 H 0.422 0.578 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.838 -2.245 -4.613 7.772 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.170 4.170 3 Si 0.717 3.283 4 C -0.096 4.096 5 C -0.252 4.252 6 C -0.220 4.220 7 C -0.074 4.074 8 C -0.104 4.104 9 C 0.295 3.705 10 O -0.425 6.425 11 N -0.351 5.351 12 C 0.114 3.886 13 C -0.115 4.115 14 C 0.061 3.939 15 F -0.120 7.120 16 C -0.185 4.185 17 C -0.111 4.111 18 C -0.158 4.158 19 C -0.079 4.079 20 C -0.183 4.183 21 C 0.037 3.963 22 H 0.160 0.840 23 F -0.201 7.201 24 C -0.223 4.223 25 N -0.127 5.127 26 H 0.256 0.744 27 H 0.114 0.886 28 H -0.236 1.236 29 H -0.214 1.214 30 H 0.141 0.859 31 H 0.162 0.838 32 H 0.153 0.847 33 H 0.168 0.832 34 H 0.266 0.734 35 H 0.165 0.835 36 H 0.172 0.828 37 H 0.161 0.839 38 H 0.149 0.851 39 H 0.142 0.858 40 H 0.115 0.885 41 H 0.118 0.882 42 H 0.094 0.906 43 H 0.261 0.739 Dipole moment (debyes) X Y Z Total from point charges 5.715 -1.490 -3.673 6.955 hybrid contribution -0.528 -0.909 0.185 1.068 sum 5.186 -2.399 -3.488 6.695 Atomic orbital electron populations 1.86474 1.17566 1.82466 1.51582 1.24596 0.85596 1.11470 0.95326 0.94439 0.76919 0.73224 0.83729 1.20088 1.05585 0.84717 0.99188 1.20717 1.08326 0.99272 0.96878 1.20768 1.08045 0.92065 1.01129 1.19901 1.02180 0.96896 0.88380 1.20285 0.99293 0.93244 0.97610 1.21028 0.86341 0.81716 0.81376 1.90872 1.46002 1.38896 1.66714 1.45525 1.31028 1.19021 1.39551 1.19427 0.88169 0.92275 0.88696 1.19635 0.94859 0.98798 0.98174 1.17647 0.86627 0.89419 1.00235 1.91376 1.60488 1.64931 1.95167 1.21368 1.02031 0.94213 1.00853 1.21335 0.92573 0.98715 0.98459 1.21501 0.99396 0.98423 0.96448 1.20979 0.97914 0.92793 0.96194 1.23942 1.03040 0.92690 0.98586 1.23313 0.86265 0.87988 0.98742 0.83977 1.92796 1.60804 1.75203 1.91322 1.24399 0.99004 0.96039 1.02870 1.41857 1.43455 1.08890 1.18461 0.74355 0.88581 1.23569 1.21420 0.85892 0.83789 0.84673 0.83241 0.73369 0.83505 0.82822 0.83949 0.85083 0.85775 0.88513 0.88179 0.90557 0.73949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.12 12.86 -148.98 -1.92 -3.03 16 2 C -0.06 -0.06 3.07 71.24 0.22 0.16 16 3 Si 0.81 -0.21 30.60 68.60 2.10 1.88 16 4 C 0.02 0.13 6.53 41.08 0.27 0.40 16 5 C -0.23 -2.31 9.37 22.14 0.21 -2.10 16 6 C -0.20 -1.39 10.76 22.14 0.24 -1.15 16 7 C 0.04 0.11 5.66 41.08 0.23 0.34 16 8 C -0.06 0.43 6.24 29.10 0.18 0.61 16 9 C 0.51 -0.38 5.75 87.66 0.50 0.12 16 10 O -0.55 -5.61 13.22 -3.02 -0.04 -5.65 16 11 N -0.70 3.98 4.85 -423.92 -2.06 1.93 16 12 C 0.20 0.09 1.07 3.38 0.00 0.09 16 13 C -0.11 -0.65 4.57 -19.82 -0.09 -0.74 16 14 C 0.08 0.64 6.72 22.37 0.15 0.79 16 15 F -0.14 -1.32 12.94 44.97 0.58 -0.74 16 16 C -0.17 -0.94 10.03 22.31 0.22 -0.72 16 17 C -0.09 -0.33 10.04 22.26 0.22 -0.10 16 18 C -0.14 -0.59 10.04 22.27 0.22 -0.37 16 19 C -0.06 -0.31 7.38 22.26 0.16 -0.15 16 20 C -0.14 0.37 6.94 31.12 0.22 0.59 16 21 C 0.07 -0.05 5.58 31.14 0.17 0.12 16 22 H 0.14 -1.07 8.14 -2.39 -0.02 -1.09 16 23 F -0.22 -1.48 17.41 44.97 0.78 -0.70 16 24 C -0.18 -0.71 6.99 31.14 0.22 -0.49 16 25 N -0.53 -2.01 6.07 -171.13 -1.04 -3.05 16 26 H 0.40 -3.75 8.74 -74.06 -0.65 -4.39 16 27 H 0.10 -0.43 7.96 -2.39 -0.02 -0.45 16 28 H -0.31 -2.81 7.11 99.48 0.71 -2.11 16 29 H -0.29 -1.41 7.11 99.48 0.71 -0.70 16 30 H 0.12 1.29 6.24 -2.91 -0.02 1.27 16 31 H 0.14 0.58 8.06 -2.91 -0.02 0.55 16 32 H 0.14 -1.75 8.14 -2.39 -0.02 -1.77 16 33 H 0.15 -1.88 8.14 -2.39 -0.02 -1.90 16 34 H 0.43 -6.00 8.63 -92.71 -0.80 -6.80 16 35 H 0.15 0.34 8.06 -2.91 -0.02 0.32 16 36 H 0.15 -0.25 8.06 -2.91 -0.02 -0.28 16 37 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 38 H 0.13 0.35 5.55 -2.91 -0.02 0.33 16 39 H 0.12 -1.14 8.12 -2.39 -0.02 -1.16 16 40 H 0.10 0.13 6.95 -2.39 -0.02 0.11 16 41 H 0.10 0.86 5.20 -2.39 -0.01 0.85 16 42 H 0.08 0.37 8.14 -2.39 -0.02 0.35 16 43 H 0.42 -0.37 8.96 -92.71 -0.83 -1.20 16 Total: 0.00 -30.61 360.07 0.63 -29.98 By element: Atomic # 1 Polarization: -16.88 SS G_CDS: -1.14 Total: -18.02 kcal Atomic # 6 Polarization: -5.95 SS G_CDS: 3.36 Total: -2.60 kcal Atomic # 7 Polarization: 1.97 SS G_CDS: -3.10 Total: -1.12 kcal Atomic # 8 Polarization: -6.73 SS G_CDS: -1.96 Total: -8.69 kcal Atomic # 9 Polarization: -2.80 SS G_CDS: 1.36 Total: -1.44 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: 2.10 Total: 1.88 kcal Total: -30.61 0.63 -29.98 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_14644196.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -8.999 kcal (2) G-P(sol) polarization free energy of solvation -30.610 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.608 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.979 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.977 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds