Wall clock time and date at job start Tue Mar 9 2021 13:34:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86306 * 109.47048 * 2 1 4 4 C 1.50698 * 109.47092 * 119.99988 * 2 1 3 5 5 C 1.38261 * 119.94785 * 64.99951 * 4 2 1 6 6 C 1.38142 * 120.06017 * 180.02562 * 5 4 2 7 7 C 1.38735 * 119.94138 * 359.97438 * 6 5 4 8 8 O 1.35902 * 120.05322 * 180.02562 * 7 6 5 9 9 C 1.42907 * 117.00049 * 180.02562 * 8 7 6 10 10 C 1.50699 * 109.47079 * 180.02562 * 9 8 7 11 11 O 1.21282 * 119.99930 * 359.97438 * 10 9 8 12 12 N 1.34773 * 119.99795 * 179.97438 * 10 9 8 13 13 C 1.46494 * 120.00353 * 179.97438 * 12 10 9 14 14 C 1.50701 * 112.85091 * 50.32865 * 13 12 10 15 15 C 1.38431 * 120.01802 * 191.19679 * 14 13 12 16 16 F 1.35105 * 120.02491 * 0.05031 * 15 14 13 17 17 C 1.38478 * 119.95195 * 180.02562 * 15 14 13 18 18 C 1.38183 * 119.97246 * 0.02562 * 17 15 14 19 19 C 1.38265 * 120.02494 * 359.97438 * 18 17 15 20 20 C 1.38221 * 120.05308 * 0.25888 * 19 18 17 21 21 C 1.53784 * 113.69028 * 279.06787 * 13 12 10 22 22 C 1.53784 * 87.08127 * 270.86905 * 21 13 12 23 23 H 1.08998 * 113.61442 * 89.11360 * 22 21 13 24 24 F 1.39896 * 113.69220 * 220.00845 * 22 21 13 25 25 C 1.53778 * 113.62140 * 181.53195 * 13 12 10 26 26 C 1.38725 * 119.89089 * 0.28160 * 7 6 5 27 27 C 1.38150 * 119.94109 * 359.42232 * 26 7 6 28 28 H 0.96696 * 113.99982 * 60.00198 * 1 2 3 29 29 H 1.08999 * 109.47517 * 239.99863 * 2 1 3 30 30 H 1.48491 * 109.99900 * 298.68148 * 3 2 1 31 31 H 1.48498 * 109.99735 * 59.99928 * 3 2 1 32 32 H 1.08003 * 119.96875 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.02946 * 180.02562 * 6 5 4 34 34 H 1.08998 * 109.46959 * 59.99633 * 9 8 7 35 35 H 1.08998 * 109.46657 * 299.99726 * 9 8 7 36 36 H 0.97008 * 119.99922 * 0.02562 * 12 10 9 37 37 H 1.08004 * 120.01856 * 180.02562 * 17 15 14 38 38 H 1.08002 * 119.98355 * 179.97438 * 18 17 15 39 39 H 1.08002 * 119.97048 * 179.97438 * 19 18 17 40 40 H 1.07995 * 119.99145 * 179.72245 * 20 19 18 41 41 H 1.09000 * 113.61516 * 25.41315 * 21 13 12 42 42 H 1.09006 * 113.61642 * 156.31893 * 21 13 12 43 43 H 1.08999 * 113.61875 * 203.75019 * 25 13 12 44 44 H 1.09009 * 113.60932 * 334.64732 * 25 13 12 45 45 H 1.08000 * 120.03299 * 179.71841 * 26 7 6 46 46 H 1.08006 * 119.97049 * 180.27874 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6840 -2.0604 1.3973 6 6 2.1429 -2.7138 2.5246 7 6 2.8530 -2.0143 3.4895 8 8 3.3060 -2.6549 4.5992 9 6 4.0292 -1.8716 5.5508 10 6 4.4491 -2.7449 6.7049 11 8 4.1574 -3.9221 6.7121 12 7 5.1487 -2.2178 7.7291 13 6 5.5565 -3.0665 8.8514 14 6 6.2438 -4.3324 8.4082 15 6 6.4832 -5.3461 9.3201 16 9 6.1001 -5.2016 10.6076 17 6 7.1153 -6.5084 8.9115 18 6 7.5068 -6.6551 7.5944 19 6 7.2671 -5.6419 6.6845 20 6 6.6405 -4.4793 7.0923 21 6 4.4429 -3.3001 9.8860 22 6 4.9437 -2.0307 10.5951 23 1 4.4716 -1.1157 10.2375 24 9 4.9473 -2.1306 11.9905 25 6 6.3138 -2.3081 9.9541 26 6 3.0953 -0.6586 3.3224 27 6 2.6395 -0.0111 2.1904 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5879 2.4585 -1.2242 31 1 1.5614 2.4679 1.2085 32 1 1.1308 -2.6045 0.6460 33 1 1.9499 -3.7685 2.6542 34 1 3.3926 -1.0661 5.9170 35 1 4.9139 -1.4481 5.0755 36 1 5.3817 -1.2761 7.7236 37 1 7.3023 -7.3002 9.6219 38 1 8.0001 -7.5614 7.2756 39 1 7.5737 -5.7573 5.6554 40 1 6.4578 -3.6868 6.3817 41 1 3.4380 -3.2030 9.4752 42 1 4.5756 -4.2092 10.4726 43 1 6.9580 -2.9459 10.5594 44 1 6.8193 -1.4102 9.5983 45 1 3.6439 -0.1108 4.0743 46 1 2.8317 1.0434 2.0576 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_2989410.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:34:20 Heat of formation + Delta-G solvation = -84.013609 kcal Electronic energy + Delta-G solvation = -34091.635581 eV Core-core repulsion = 29165.305342 eV Total energy + Delta-G solvation = -4926.330239 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -50.20644 -48.62213 -42.08087 -41.21841 -39.73684 -39.06332 -38.58764 -37.29870 -34.45559 -32.49611 -32.19032 -31.80653 -31.41148 -29.59248 -27.21609 -26.33791 -25.88921 -24.14994 -23.71025 -22.96243 -22.36468 -21.79443 -20.82316 -19.47390 -18.78176 -18.58161 -18.40991 -17.98227 -17.42685 -17.23473 -17.12786 -17.08133 -16.90465 -16.76843 -16.62222 -15.94717 -15.88039 -15.69448 -15.59285 -15.45612 -14.98146 -14.92621 -14.48956 -14.44195 -14.14097 -14.08185 -13.96910 -13.79310 -13.53923 -13.48131 -13.38972 -13.03680 -12.84865 -12.74400 -12.46090 -12.23382 -12.14783 -11.88642 -11.71258 -11.59557 -11.44589 -11.05288 -10.46033 -10.42766 -10.02762 -9.87370 -9.64598 -9.21765 -4.91199 0.09039 0.21178 0.27731 0.32106 1.32650 1.33094 1.38296 1.62334 1.96656 2.47667 2.51528 2.62319 3.06720 3.14513 3.19064 3.27174 3.40347 3.45375 3.53664 3.74075 3.77178 3.80791 3.84123 3.95389 3.98718 4.06307 4.09783 4.11453 4.29927 4.30693 4.35395 4.41343 4.46358 4.50211 4.56395 4.60990 4.69589 4.75126 4.81444 4.95190 4.97605 4.99463 5.07576 5.16687 5.25472 5.27995 5.40119 5.43064 5.51870 5.68918 5.86585 6.23545 6.41071 6.60578 7.07273 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.086 4.086 3 Si 0.770 3.230 4 C -0.124 4.124 5 C -0.062 4.062 6 C -0.166 4.166 7 C 0.124 3.876 8 O -0.316 6.316 9 C 0.035 3.965 10 C 0.512 3.488 11 O -0.543 6.543 12 N -0.690 5.690 13 C 0.203 3.797 14 C -0.113 4.113 15 C 0.081 3.919 16 F -0.140 7.140 17 C -0.163 4.163 18 C -0.092 4.092 19 C -0.136 4.136 20 C -0.068 4.068 21 C -0.189 4.189 22 C 0.071 3.929 23 H 0.142 0.858 24 F -0.220 7.220 25 C -0.142 4.142 26 C -0.199 4.199 27 C -0.080 4.080 28 H 0.393 0.607 29 H 0.091 0.909 30 H -0.291 1.291 31 H -0.294 1.294 32 H 0.134 0.866 33 H 0.128 0.872 34 H 0.125 0.875 35 H 0.133 0.867 36 H 0.429 0.571 37 H 0.148 0.852 38 H 0.156 0.844 39 H 0.146 0.854 40 H 0.130 0.870 41 H 0.076 0.924 42 H 0.105 0.895 43 H 0.099 0.901 44 H 0.127 0.873 45 H 0.168 0.832 46 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.183 6.438 -4.531 10.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.194 4.194 3 Si 0.675 3.325 4 C -0.124 4.124 5 C -0.080 4.080 6 C -0.184 4.184 7 C 0.078 3.922 8 O -0.229 6.229 9 C -0.042 4.042 10 C 0.299 3.701 11 O -0.419 6.419 12 N -0.347 5.347 13 C 0.115 3.885 14 C -0.115 4.115 15 C 0.061 3.939 16 F -0.119 7.119 17 C -0.182 4.182 18 C -0.110 4.110 19 C -0.154 4.154 20 C -0.086 4.086 21 C -0.228 4.228 22 C 0.035 3.965 23 H 0.160 0.840 24 F -0.201 7.201 25 C -0.179 4.179 26 C -0.217 4.217 27 C -0.097 4.097 28 H 0.244 0.756 29 H 0.109 0.891 30 H -0.219 1.219 31 H -0.221 1.221 32 H 0.152 0.848 33 H 0.146 0.854 34 H 0.143 0.857 35 H 0.151 0.849 36 H 0.269 0.731 37 H 0.166 0.834 38 H 0.174 0.826 39 H 0.164 0.836 40 H 0.148 0.852 41 H 0.094 0.906 42 H 0.123 0.877 43 H 0.117 0.883 44 H 0.145 0.855 45 H 0.185 0.815 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 5.814 5.923 -3.853 9.151 hybrid contribution -1.548 -0.122 -0.079 1.555 sum 4.266 5.801 -3.932 8.204 Atomic orbital electron populations 1.86554 1.18873 1.80697 1.50965 1.25037 0.83823 1.12090 0.98479 0.94189 0.90108 0.71852 0.76364 1.19429 1.01652 0.94229 0.97105 1.20929 0.96587 0.94107 0.96421 1.20610 1.02327 1.01111 0.94386 1.19137 0.94750 0.91784 0.86497 1.86127 1.69260 1.38117 1.29399 1.22756 0.99794 0.93439 0.88236 1.20532 0.77738 0.88302 0.83566 1.90854 1.54036 1.18136 1.78845 1.45301 1.56437 1.13787 1.19130 1.19448 0.94811 0.88815 0.85398 1.19638 1.01843 0.95648 0.94402 1.17632 1.01491 0.96284 0.78459 1.91362 1.88799 1.95925 1.35788 1.21393 1.01179 0.96990 0.98619 1.21361 0.97979 0.99937 0.91746 1.21520 0.99180 0.93540 1.01126 1.20943 0.95311 0.98494 0.93892 1.24473 0.99644 1.00797 0.97839 1.23317 0.98483 1.00186 0.74478 0.84010 1.92796 1.97317 1.97503 1.32483 1.23942 0.96813 1.02491 0.94695 1.21480 1.06380 0.92807 1.01041 1.21057 0.96071 1.00114 0.92463 0.75629 0.89102 1.21886 1.22117 0.84825 0.85398 0.85747 0.84917 0.73058 0.83436 0.82648 0.83614 0.85221 0.90556 0.87665 0.88273 0.85499 0.81482 0.83411 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.20 12.81 -148.98 -1.91 -3.11 16 2 C -0.09 0.11 2.79 71.24 0.20 0.31 16 3 Si 0.77 -2.87 29.85 68.60 2.05 -0.83 16 4 C -0.12 -0.18 5.39 -19.85 -0.11 -0.29 16 5 C -0.06 -0.21 9.68 22.25 0.22 0.01 16 6 C -0.17 -0.74 9.99 22.37 0.22 -0.52 16 7 C 0.12 0.28 6.69 22.51 0.15 0.43 16 8 O -0.32 -1.08 9.67 -73.41 -0.71 -1.79 16 9 C 0.04 -0.23 5.22 71.24 0.37 0.14 16 10 C 0.51 -0.44 5.90 87.66 0.52 0.07 16 11 O -0.54 -5.60 13.98 16.00 0.22 -5.37 16 12 N -0.69 4.66 4.79 -423.94 -2.03 2.63 16 13 C 0.20 -0.16 1.03 3.39 0.00 -0.16 16 14 C -0.11 -0.48 4.51 -19.82 -0.09 -0.57 16 15 C 0.08 0.51 6.73 22.37 0.15 0.66 16 16 F -0.14 -1.10 12.95 44.97 0.58 -0.52 16 17 C -0.16 -0.63 10.03 22.31 0.22 -0.40 16 18 C -0.09 -0.13 10.04 22.26 0.22 0.09 16 19 C -0.14 -0.27 10.04 22.27 0.22 -0.04 16 20 C -0.07 -0.22 7.52 22.26 0.17 -0.05 16 21 C -0.19 -0.55 6.97 31.12 0.22 -0.34 16 22 C 0.07 -0.12 5.58 31.12 0.17 0.05 16 23 H 0.14 -1.18 8.14 -2.39 -0.02 -1.20 16 24 F -0.22 -1.30 17.41 44.97 0.78 -0.51 16 25 C -0.14 0.58 6.95 31.12 0.22 0.80 16 26 C -0.20 0.60 9.04 22.37 0.20 0.81 16 27 C -0.08 0.13 8.66 22.26 0.19 0.33 16 28 H 0.39 -2.28 8.74 -74.06 -0.65 -2.93 16 29 H 0.09 -0.43 7.96 -2.39 -0.02 -0.45 16 30 H -0.29 -0.32 7.11 99.48 0.71 0.39 16 31 H -0.29 -0.75 7.05 99.48 0.70 -0.05 16 32 H 0.13 0.23 8.06 -2.91 -0.02 0.21 16 33 H 0.13 0.60 8.06 -2.91 -0.02 0.57 16 34 H 0.12 -1.51 7.65 -2.39 -0.02 -1.53 16 35 H 0.13 -1.83 7.67 -2.39 -0.02 -1.85 16 36 H 0.43 -6.75 8.63 -92.70 -0.80 -7.55 16 37 H 0.15 0.09 8.06 -2.91 -0.02 0.06 16 38 H 0.16 -0.59 8.06 -2.91 -0.02 -0.62 16 39 H 0.15 -0.32 8.06 -2.91 -0.02 -0.34 16 40 H 0.13 0.08 5.80 -2.91 -0.02 0.06 16 41 H 0.08 0.33 8.14 -2.39 -0.02 0.31 16 42 H 0.11 0.78 5.08 -2.38 -0.01 0.77 16 43 H 0.10 -0.04 7.07 -2.39 -0.02 -0.06 16 44 H 0.13 -1.41 8.11 -2.38 -0.02 -1.42 16 45 H 0.17 -1.86 6.30 -2.91 -0.02 -1.88 16 46 H 0.15 -0.89 4.86 -2.91 -0.01 -0.91 16 Total: 0.00 -28.70 382.83 2.11 -26.58 By element: Atomic # 1 Polarization: -18.06 SS G_CDS: -0.35 Total: -18.41 kcal Atomic # 6 Polarization: -2.15 SS G_CDS: 3.47 Total: 1.33 kcal Atomic # 7 Polarization: 4.66 SS G_CDS: -2.03 Total: 2.63 kcal Atomic # 8 Polarization: -7.88 SS G_CDS: -2.39 Total: -10.27 kcal Atomic # 9 Polarization: -2.40 SS G_CDS: 1.37 Total: -1.03 kcal Atomic # 14 Polarization: -2.87 SS G_CDS: 2.05 Total: -0.83 kcal Total: -28.70 2.11 -26.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_2989410.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.429 kcal (2) G-P(sol) polarization free energy of solvation -28.699 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.114 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.014 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds