Wall clock time and date at job start Tue Mar 9 2021 13:35:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86303 * 109.46927 * 2 1 4 4 C 1.50703 * 109.47171 * 119.99815 * 2 1 3 5 5 C 1.38245 * 119.97168 * 244.72698 * 4 2 1 6 6 C 1.38293 * 120.11207 * 179.76639 * 5 4 2 7 7 C 1.38115 * 120.05301 * 0.50895 * 6 5 4 8 8 C 1.38755 * 119.94774 * 359.74403 * 7 6 5 9 9 O 1.35902 * 120.05813 * 179.97438 * 8 7 6 10 10 C 1.42898 * 116.99780 * 0.02807 * 9 8 7 11 11 C 1.50698 * 109.46788 * 179.97438 * 10 9 8 12 12 O 1.21277 * 120.00334 * 359.97438 * 11 10 9 13 13 N 1.34777 * 119.99747 * 179.97438 * 11 10 9 14 14 C 1.46506 * 119.99578 * 180.02562 * 13 11 10 15 15 C 1.50695 * 112.85282 * 50.33529 * 14 13 11 16 16 C 1.38441 * 120.01512 * 189.66310 * 15 14 13 17 17 F 1.35095 * 120.02294 * 0.02776 * 16 15 14 18 18 C 1.38481 * 119.94762 * 180.02562 * 16 15 14 19 19 C 1.38172 * 119.97387 * 0.02562 * 18 16 15 20 20 C 1.38268 * 120.02899 * 359.97438 * 19 18 16 21 21 C 1.38216 * 120.05060 * 359.72695 * 20 19 18 22 22 C 1.53777 * 113.61473 * 279.13556 * 14 13 11 23 23 C 1.54052 * 86.98872 * 270.84273 * 22 14 13 24 24 H 1.08999 * 113.69093 * 89.12650 * 23 22 14 25 25 F 1.39903 * 113.62017 * 220.02384 * 23 22 14 26 26 C 1.53784 * 113.61163 * 181.52968 * 14 13 11 27 27 C 1.38159 * 119.97168 * 65.00069 * 4 2 1 28 28 H 0.96698 * 113.99898 * 299.99797 * 1 2 3 29 29 H 1.09002 * 109.47259 * 239.99966 * 2 1 3 30 30 H 1.48501 * 109.99761 * 178.67994 * 3 2 1 31 31 H 1.48504 * 109.99730 * 299.99986 * 3 2 1 32 32 H 1.07999 * 119.94339 * 359.97438 * 5 4 2 33 33 H 1.07996 * 119.97202 * 180.23075 * 6 5 4 34 34 H 1.07998 * 120.02825 * 179.71902 * 7 6 5 35 35 H 1.09000 * 109.47198 * 299.99247 * 10 9 8 36 36 H 1.08997 * 109.47444 * 59.99613 * 10 9 8 37 37 H 0.97000 * 120.00665 * 0.02562 * 13 11 10 38 38 H 1.07998 * 120.00922 * 179.97438 * 18 16 15 39 39 H 1.08005 * 119.98198 * 179.97438 * 19 18 16 40 40 H 1.08005 * 119.97303 * 180.02562 * 20 19 18 41 41 H 1.08001 * 119.98951 * 180.27869 * 21 20 19 42 42 H 1.08995 * 113.61387 * 25.43645 * 22 14 13 43 43 H 1.08999 * 113.61559 * 156.34073 * 22 14 13 44 44 H 1.08998 * 113.61584 * 203.66842 * 26 14 13 45 45 H 1.09004 * 113.61390 * 334.56800 * 26 14 13 46 46 H 1.08005 * 120.03090 * 359.95820 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.6436 -0.0128 2.1883 6 6 3.1018 -0.6607 3.3209 7 6 2.8577 -2.0092 3.4927 8 6 2.1476 -2.7128 2.5304 9 8 1.9066 -4.0399 2.6970 10 6 2.4133 -4.6468 3.8874 11 6 2.0514 -6.1096 3.8985 12 8 1.4213 -6.5855 2.9781 13 7 2.4281 -6.8891 4.9315 14 6 2.0767 -8.3114 4.9420 15 6 2.4409 -9.0137 3.6594 16 6 1.9992 -10.3051 3.4275 17 9 1.2411 -10.9362 4.3505 18 6 2.3351 -10.9493 2.2486 19 6 3.1110 -10.3029 1.3055 20 6 3.5516 -9.0132 1.5382 21 6 3.2118 -8.3669 2.7118 22 6 0.6374 -8.5869 5.4080 23 6 1.2015 -8.6609 6.8396 24 1 1.2240 -7.6990 7.3517 25 9 0.6311 -9.6761 7.6151 26 6 2.5464 -9.0525 6.2049 27 6 1.6846 -2.0594 1.3978 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 3.5345 1.7703 0.0321 31 1 1.5613 2.4679 -1.2085 32 1 2.8396 1.0406 2.0533 33 1 3.6548 -0.1128 4.0694 34 1 3.2197 -2.5158 4.3752 35 1 3.4977 -4.5402 3.9163 36 1 1.9768 -4.1582 4.7585 37 1 2.9318 -6.5085 5.6679 38 1 1.9914 -11.9569 2.0668 39 1 3.3734 -10.8055 0.3862 40 1 4.1577 -8.5086 0.8003 41 1 3.5527 -7.3578 2.8905 42 1 -0.0414 -7.7494 5.2474 43 1 0.2355 -9.5338 5.0476 44 1 2.6656 -10.1265 6.0620 45 1 3.4079 -8.5906 6.6874 46 1 1.1313 -2.6048 0.6474 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_4860298.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:35:10 Heat of formation + Delta-G solvation = -86.027841 kcal Electronic energy + Delta-G solvation = -34243.404500 eV Core-core repulsion = 29316.986917 eV Total energy + Delta-G solvation = -4926.417583 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -50.21402 -48.62648 -42.12354 -41.24719 -39.77468 -39.09217 -38.60600 -37.21808 -34.47762 -32.47508 -32.34222 -31.56570 -31.44333 -29.30107 -27.23053 -26.84726 -25.99243 -23.84191 -23.67121 -23.20928 -22.58796 -21.70756 -20.83247 -19.33933 -18.83598 -18.59528 -18.00078 -17.71840 -17.44641 -17.26183 -17.13460 -17.12115 -16.90788 -16.89740 -16.57938 -16.18821 -15.95417 -15.87195 -15.65839 -15.36237 -14.96006 -14.93380 -14.67517 -14.44566 -14.19457 -14.13535 -14.01337 -13.83609 -13.49930 -13.43348 -13.10145 -12.91915 -12.87991 -12.76792 -12.59745 -12.23351 -12.11545 -12.01545 -11.68299 -11.62434 -11.46530 -11.08063 -10.49314 -10.45783 -9.93282 -9.90174 -9.67948 -9.27929 -4.99236 0.05417 0.17806 0.21297 0.39604 1.24254 1.34796 1.36111 1.65452 1.97141 2.46434 2.48255 2.67926 3.04575 3.12244 3.16115 3.24825 3.38401 3.50430 3.53554 3.68332 3.72177 3.76906 3.82836 3.93906 4.00975 4.06350 4.08008 4.13911 4.25535 4.26312 4.32200 4.34866 4.48403 4.49430 4.54459 4.59335 4.64399 4.73221 4.77957 4.92170 4.95804 4.98241 5.04992 5.24356 5.24863 5.36640 5.37861 5.40070 5.45820 5.69612 5.83010 6.22950 6.40015 6.74561 7.04312 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.086 4.086 3 Si 0.794 3.206 4 C -0.085 4.085 5 C -0.156 4.156 6 C -0.070 4.070 7 C -0.201 4.201 8 C 0.116 3.884 9 O -0.321 6.321 10 C 0.038 3.962 11 C 0.511 3.489 12 O -0.544 6.544 13 N -0.689 5.689 14 C 0.202 3.798 15 C -0.115 4.115 16 C 0.083 3.917 17 F -0.139 7.139 18 C -0.163 4.163 19 C -0.092 4.092 20 C -0.138 4.138 21 C -0.067 4.067 22 C -0.185 4.185 23 C 0.072 3.928 24 H 0.144 0.856 25 F -0.220 7.220 26 C -0.142 4.142 27 C -0.151 4.151 28 H 0.396 0.604 29 H 0.099 0.901 30 H -0.280 1.280 31 H -0.303 1.303 32 H 0.150 0.850 33 H 0.164 0.836 34 H 0.163 0.837 35 H 0.129 0.871 36 H 0.128 0.872 37 H 0.429 0.571 38 H 0.149 0.851 39 H 0.156 0.844 40 H 0.143 0.857 41 H 0.128 0.872 42 H 0.077 0.923 43 H 0.102 0.898 44 H 0.099 0.901 45 H 0.127 0.873 46 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.692 5.753 6.829 11.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.195 4.195 3 Si 0.699 3.301 4 C -0.086 4.086 5 C -0.174 4.174 6 C -0.088 4.088 7 C -0.220 4.220 8 C 0.071 3.929 9 O -0.234 6.234 10 C -0.040 4.040 11 C 0.298 3.702 12 O -0.420 6.420 13 N -0.346 5.346 14 C 0.114 3.886 15 C -0.117 4.117 16 C 0.063 3.937 17 F -0.118 7.118 18 C -0.182 4.182 19 C -0.110 4.110 20 C -0.157 4.157 21 C -0.086 4.086 22 C -0.224 4.224 23 C 0.037 3.963 24 H 0.162 0.838 25 F -0.201 7.201 26 C -0.180 4.180 27 C -0.170 4.170 28 H 0.246 0.754 29 H 0.117 0.883 30 H -0.207 1.207 31 H -0.231 1.231 32 H 0.167 0.833 33 H 0.181 0.819 34 H 0.180 0.820 35 H 0.146 0.854 36 H 0.146 0.854 37 H 0.270 0.730 38 H 0.167 0.833 39 H 0.173 0.827 40 H 0.161 0.839 41 H 0.146 0.854 42 H 0.096 0.904 43 H 0.120 0.880 44 H 0.117 0.883 45 H 0.145 0.855 46 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 6.652 5.513 5.149 10.057 hybrid contribution -0.312 -1.072 -0.147 1.126 sum 6.340 4.441 5.001 9.215 Atomic orbital electron populations 1.86483 1.17398 1.82310 1.50450 1.25417 0.85298 1.11822 0.96940 0.93565 0.77754 0.74137 0.84602 1.20190 0.98254 0.93103 0.97029 1.21214 1.00666 1.00592 0.94895 1.21352 0.96745 0.93625 0.97079 1.21641 1.03451 0.96324 1.00535 1.19149 0.96225 0.82300 0.95253 1.86123 1.74651 1.20772 1.41903 1.22724 1.02760 0.89646 0.88842 1.20549 0.79188 0.88497 0.81994 1.90860 1.39232 1.75291 1.36591 1.45299 1.58352 1.06777 1.24160 1.19470 0.95783 0.81300 0.91996 1.19653 1.01024 0.92908 0.98089 1.17616 0.95729 0.91635 0.88693 1.91384 1.73503 1.82012 1.64910 1.21393 1.01520 1.02168 0.93090 1.21353 0.95557 0.94731 0.99327 1.21506 1.00909 0.95472 0.97766 1.20945 0.95557 0.99024 0.93026 1.24448 0.97023 1.04759 0.96149 1.23370 0.93323 0.90607 0.89026 0.83831 1.92799 1.86420 1.63304 1.77530 1.23951 0.98924 1.02496 0.92658 1.20290 1.04337 0.94605 0.97779 0.75450 0.88328 1.20694 1.23136 0.83267 0.81880 0.81964 0.85381 0.85421 0.73041 0.83316 0.82663 0.83878 0.85444 0.90408 0.87974 0.88266 0.85507 0.87296 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.55 12.83 -148.98 -1.91 -3.46 16 2 C -0.09 -0.11 2.80 71.24 0.20 0.09 16 3 Si 0.79 -2.03 29.80 68.60 2.04 0.02 16 4 C -0.09 -0.11 5.35 -19.88 -0.11 -0.21 16 5 C -0.16 0.56 8.67 22.28 0.19 0.75 16 6 C -0.07 0.43 10.04 22.25 0.22 0.65 16 7 C -0.20 0.97 9.04 22.36 0.20 1.18 16 8 C 0.12 0.26 6.69 22.51 0.15 0.42 16 9 O -0.32 -1.37 9.67 -73.41 -0.71 -2.08 16 10 C 0.04 -0.23 5.22 71.24 0.37 0.14 16 11 C 0.51 -0.21 5.84 87.66 0.51 0.31 16 12 O -0.54 -6.00 13.87 16.02 0.22 -5.78 16 13 N -0.69 4.48 4.82 -423.93 -2.04 2.44 16 14 C 0.20 -0.11 1.03 3.38 0.00 -0.11 16 15 C -0.11 -0.55 4.58 -19.82 -0.09 -0.64 16 16 C 0.08 0.55 6.71 22.38 0.15 0.70 16 17 F -0.14 -1.12 12.93 44.97 0.58 -0.53 16 18 C -0.16 -0.71 10.03 22.31 0.22 -0.48 16 19 C -0.09 -0.21 10.04 22.26 0.22 0.02 16 20 C -0.14 -0.44 10.04 22.27 0.22 -0.21 16 21 C -0.07 -0.29 7.48 22.26 0.17 -0.13 16 22 C -0.19 -0.53 6.99 31.21 0.22 -0.32 16 23 C 0.07 -0.14 5.58 31.21 0.17 0.04 16 24 H 0.14 -1.26 8.14 -2.39 -0.02 -1.28 16 25 F -0.22 -1.24 17.41 44.97 0.78 -0.45 16 26 C -0.14 0.57 6.94 31.12 0.22 0.79 16 27 C -0.15 -0.82 9.62 22.37 0.22 -0.60 16 28 H 0.40 -2.36 8.70 -74.06 -0.64 -3.01 16 29 H 0.10 0.35 7.96 -2.39 -0.02 0.33 16 30 H -0.28 -0.35 7.11 99.48 0.71 0.36 16 31 H -0.30 -1.65 7.11 99.48 0.71 -0.95 16 32 H 0.15 -1.24 4.90 -2.91 -0.01 -1.26 16 33 H 0.16 -2.02 8.06 -2.91 -0.02 -2.04 16 34 H 0.16 -1.99 6.30 -2.91 -0.02 -2.01 16 35 H 0.13 -1.66 7.66 -2.39 -0.02 -1.68 16 36 H 0.13 -1.60 7.66 -2.39 -0.02 -1.62 16 37 H 0.43 -6.70 8.63 -92.71 -0.80 -7.50 16 38 H 0.15 0.14 8.06 -2.91 -0.02 0.11 16 39 H 0.16 -0.46 8.06 -2.91 -0.02 -0.49 16 40 H 0.14 -0.09 8.06 -2.91 -0.02 -0.11 16 41 H 0.13 0.27 5.62 -2.91 -0.02 0.25 16 42 H 0.08 0.33 8.14 -2.39 -0.02 0.31 16 43 H 0.10 0.76 5.22 -2.39 -0.01 0.75 16 44 H 0.10 -0.02 6.93 -2.39 -0.02 -0.04 16 45 H 0.13 -1.39 8.12 -2.38 -0.02 -1.41 16 46 H 0.11 1.02 8.06 -2.91 -0.02 0.99 16 Total: 0.00 -29.87 382.51 2.10 -27.77 By element: Atomic # 1 Polarization: -19.95 SS G_CDS: -0.34 Total: -20.29 kcal Atomic # 6 Polarization: -1.10 SS G_CDS: 3.47 Total: 2.37 kcal Atomic # 7 Polarization: 4.48 SS G_CDS: -2.04 Total: 2.44 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -2.40 Total: -11.32 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 1.36 Total: -0.99 kcal Atomic # 14 Polarization: -2.03 SS G_CDS: 2.04 Total: 0.02 kcal Total: -29.87 2.10 -27.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_4860298.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.258 kcal (2) G-P(sol) polarization free energy of solvation -29.868 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -88.126 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.770 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds