Wall clock time and date at job start Tue Mar 9 2021 13:35:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37649 * 125.67453 * 2 1 4 4 C 1.46665 * 126.22474 * 359.97438 * 3 2 1 5 5 O 1.21693 * 120.00447 * 355.35843 * 4 3 2 6 6 N 1.34777 * 119.99705 * 175.34861 * 4 3 2 7 7 C 1.46500 * 120.00143 * 185.36885 * 6 4 3 8 8 C 1.50701 * 112.85005 * 50.33689 * 7 6 4 9 9 C 1.38434 * 120.01725 * 189.39297 * 8 7 6 10 10 F 1.35101 * 120.02309 * 359.97438 * 9 8 7 11 11 C 1.38485 * 119.95035 * 179.73043 * 9 8 7 12 12 C 1.38174 * 119.97170 * 0.56346 * 11 9 8 13 13 C 1.38272 * 120.02854 * 359.70925 * 12 11 9 14 14 C 1.38224 * 120.00805 * 9.66671 * 8 7 6 15 15 C 1.53780 * 113.61615 * 279.14235 * 7 6 4 16 16 C 1.54055 * 86.98560 * 270.83602 * 15 7 6 17 17 H 1.08992 * 113.61157 * 89.11500 * 16 15 7 18 18 F 1.39895 * 113.69524 * 220.01112 * 16 15 7 19 19 C 1.53785 * 113.61662 * 181.53124 * 7 6 4 20 20 C 1.37885 * 107.54603 * 180.29379 * 3 2 1 21 21 C 1.39880 * 107.09128 * 359.73913 * 20 3 2 22 22 Br 1.89102 * 126.07260 * 180.02562 * 21 20 3 23 23 C 1.35506 * 107.85587 * 0.02562 * 21 20 3 24 24 C 1.50692 * 125.57162 * 180.02562 * 23 21 20 25 25 O 1.42902 * 109.47432 * 150.02313 * 24 23 21 26 26 Si 1.86307 * 109.47279 * 30.02365 * 24 23 21 27 27 H 1.09000 * 109.47824 * 275.13490 * 1 2 3 28 28 H 1.09001 * 109.47395 * 35.13395 * 1 2 3 29 29 H 1.09001 * 109.47204 * 155.12892 * 1 2 3 30 30 H 0.97001 * 120.00494 * 5.37314 * 6 4 3 31 31 H 1.07993 * 120.01615 * 180.29423 * 11 9 8 32 32 H 1.07997 * 119.98898 * 179.72655 * 12 11 9 33 33 H 1.07998 * 119.97438 * 180.02562 * 13 12 11 34 34 H 1.07992 * 119.99216 * 359.97438 * 14 8 7 35 35 H 1.08995 * 113.61533 * 25.43234 * 15 7 6 36 36 H 1.09006 * 113.61350 * 156.33263 * 15 7 6 37 37 H 1.09001 * 113.61511 * 203.66268 * 19 7 6 38 38 H 1.08998 * 113.61223 * 334.48769 * 19 7 6 39 39 H 1.07993 * 126.45092 * 179.76547 * 20 3 2 40 40 H 1.09002 * 109.47483 * 270.02364 * 24 23 21 41 41 H 0.96705 * 114.00123 * 300.00165 * 25 24 23 42 42 H 1.48490 * 109.99964 * 58.68435 * 26 24 23 43 43 H 1.48507 * 109.99735 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8121 2.5123 -0.0005 5 8 0.6246 2.7643 -0.0863 6 7 2.7085 3.5142 0.0942 7 6 2.2484 4.9001 0.2122 8 6 1.2149 5.0835 1.2936 9 6 0.5367 6.2850 1.4068 10 9 0.8012 7.2940 0.5482 11 6 -0.4167 6.4501 2.3975 12 6 -0.6816 5.4197 3.2792 13 6 0.0005 4.2220 3.1688 14 6 0.9480 4.0540 2.1765 15 6 1.8529 5.5345 -1.1317 16 6 3.3226 5.9775 -1.2623 17 1 3.9586 5.2410 -1.7532 18 9 3.4772 7.2649 -1.7874 19 6 3.3924 5.9260 0.2731 20 6 3.5781 0.6892 -0.0067 21 6 3.5528 -0.7094 -0.0047 22 35 5.0609 -1.8503 -0.0109 23 6 2.2558 -1.1015 0.0025 24 6 1.7713 -2.5284 0.0074 25 8 0.5165 -2.6032 0.6870 26 14 3.0161 -3.6039 0.8820 27 1 -0.3635 0.0920 1.0235 28 1 -0.3634 0.8404 -0.5914 29 1 -0.3634 -0.9324 -0.4322 30 1 3.6584 3.3178 0.0842 31 1 -0.9498 7.3853 2.4838 32 1 -1.4219 5.5497 4.0547 33 1 -0.2076 3.4171 3.8581 34 1 1.4798 3.1179 2.0910 35 1 1.5459 4.8079 -1.8839 36 1 1.1537 6.3649 -1.0335 37 1 3.1133 6.8632 0.7545 38 1 4.3270 5.5156 0.6555 39 1 4.4582 1.3151 -0.0121 40 1 1.6498 -2.8745 -1.0190 41 1 0.5498 -2.3100 1.6079 42 1 3.2145 -3.1231 2.2728 43 1 2.5502 -5.0139 0.8931 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17636826_5000100.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:35:22 Heat of formation + Delta-G solvation = -32.111267 kcal Electronic energy + Delta-G solvation = -34139.745481 eV Core-core repulsion = 29257.330315 eV Total energy + Delta-G solvation = -4882.415166 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 427.038 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.18812 -48.60716 -42.99729 -41.73174 -39.51735 -38.79634 -37.97956 -34.96475 -34.28678 -32.50851 -32.05498 -31.43660 -31.09616 -27.49452 -27.30839 -27.20054 -25.84678 -23.87736 -23.54474 -22.75718 -21.81216 -20.80554 -20.61742 -19.08078 -18.79327 -18.40447 -17.98317 -17.28071 -17.20269 -17.10913 -16.99244 -16.85785 -16.41037 -16.24095 -15.94106 -15.79782 -15.52856 -15.50152 -15.15344 -14.93984 -14.61814 -14.55418 -14.39900 -14.14031 -14.07409 -13.83487 -13.69935 -13.46181 -13.19364 -13.06359 -12.87249 -12.80470 -12.75179 -12.52416 -12.22044 -12.09976 -11.64010 -11.60507 -11.45139 -11.24421 -10.88359 -10.46877 -9.94236 -9.87806 -9.67620 -9.36487 -4.68936 0.06584 0.11103 0.19346 0.35568 0.88583 1.18152 1.39130 1.52642 1.89514 2.06455 2.13348 2.48866 3.05541 3.06542 3.14628 3.17284 3.25372 3.27674 3.40952 3.53660 3.73069 3.77004 3.78843 3.93668 4.07739 4.09046 4.23623 4.26558 4.32944 4.35074 4.39726 4.50423 4.55455 4.59098 4.63656 4.67282 4.75548 4.79628 4.93420 4.96842 5.06813 5.21028 5.26192 5.37832 5.40862 5.56089 5.75397 5.83655 6.22990 6.29846 6.97401 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.387 5.387 3 C -0.056 4.056 4 C 0.594 3.406 5 O -0.551 6.551 6 N -0.685 5.685 7 C 0.205 3.795 8 C -0.110 4.110 9 C 0.085 3.915 10 F -0.140 7.140 11 C -0.160 4.160 12 C -0.091 4.091 13 C -0.134 4.134 14 C -0.072 4.072 15 C -0.180 4.180 16 C 0.070 3.930 17 H 0.140 0.860 18 F -0.219 7.219 19 C -0.144 4.144 20 C -0.089 4.089 21 C -0.190 4.190 22 Br 0.089 6.911 23 C 0.060 3.940 24 C -0.040 4.040 25 O -0.542 6.542 26 Si 0.626 3.374 27 H 0.086 0.914 28 H 0.089 0.911 29 H 0.105 0.895 30 H 0.425 0.575 31 H 0.149 0.851 32 H 0.156 0.844 33 H 0.144 0.856 34 H 0.124 0.876 35 H 0.078 0.922 36 H 0.105 0.895 37 H 0.102 0.898 38 H 0.124 0.876 39 H 0.190 0.810 40 H 0.140 0.860 41 H 0.386 0.614 42 H -0.278 1.278 43 H -0.272 1.272 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.229 -1.272 1.983 4.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 N -0.059 5.059 3 C -0.170 4.170 4 C 0.383 3.617 5 O -0.430 6.430 6 N -0.339 5.339 7 C 0.118 3.882 8 C -0.112 4.112 9 C 0.065 3.935 10 F -0.118 7.118 11 C -0.179 4.179 12 C -0.109 4.109 13 C -0.152 4.152 14 C -0.090 4.090 15 C -0.219 4.219 16 C 0.035 3.965 17 H 0.158 0.842 18 F -0.200 7.200 19 C -0.182 4.182 20 C -0.116 4.116 21 C -0.276 4.276 22 Br 0.173 6.827 23 C -0.063 4.063 24 C -0.150 4.150 25 O -0.349 6.349 26 Si 0.528 3.472 27 H 0.104 0.896 28 H 0.108 0.892 29 H 0.124 0.876 30 H 0.265 0.735 31 H 0.167 0.833 32 H 0.174 0.826 33 H 0.162 0.838 34 H 0.142 0.858 35 H 0.097 0.903 36 H 0.123 0.877 37 H 0.120 0.880 38 H 0.143 0.857 39 H 0.207 0.793 40 H 0.157 0.843 41 H 0.235 0.765 42 H -0.203 1.203 43 H -0.198 1.198 Dipole moment (debyes) X Y Z Total from point charges 3.501 -2.150 1.979 4.560 hybrid contribution -1.208 0.770 0.452 1.502 sum 2.292 -1.379 2.431 3.615 Atomic orbital electron populations 1.22456 0.74296 1.05675 1.04839 1.43882 1.07637 1.03762 1.50616 1.20026 0.90315 0.87428 1.19252 1.16865 0.85518 0.83497 0.75830 1.90898 1.17218 1.84758 1.50115 1.45124 1.10570 1.03445 1.74756 1.19457 0.94159 0.81722 0.92882 1.19586 0.99772 0.93412 0.98451 1.17594 0.99067 0.85184 0.91614 1.91394 1.93099 1.59161 1.68157 1.21400 0.98594 1.02156 0.95746 1.21348 0.99086 0.92034 0.98387 1.21472 0.96431 0.98551 0.98735 1.20892 0.97308 0.97336 0.93472 1.24416 0.98260 1.02125 0.97118 1.23354 0.97737 0.80969 0.94470 0.84234 1.92797 1.96676 1.42078 1.88420 1.23971 0.99202 0.99197 0.95835 1.21551 0.95656 0.92547 1.01809 1.20689 0.90568 0.95019 1.21277 1.96333 1.32729 1.56385 1.97302 1.20992 0.89677 0.90140 1.05506 1.24674 0.93420 0.92701 1.04253 1.86554 1.29746 1.88783 1.29769 0.92731 0.92344 0.77955 0.84151 0.89590 0.89237 0.87609 0.73520 0.83329 0.82644 0.83838 0.85832 0.90324 0.87727 0.87962 0.85739 0.79295 0.84269 0.76460 1.20310 1.19757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.05 9.46 127.77 1.21 1.15 16 2 N -0.39 0.03 3.16 -519.62 -1.64 -1.61 16 3 C -0.06 0.07 6.89 40.35 0.28 0.35 16 4 C 0.59 0.13 5.51 86.44 0.48 0.61 16 5 O -0.55 -3.80 12.57 -4.33 -0.05 -3.85 16 6 N -0.69 3.35 4.80 -427.85 -2.05 1.30 16 7 C 0.21 -0.21 0.99 3.39 0.00 -0.20 16 8 C -0.11 -0.33 4.59 -19.82 -0.09 -0.42 16 9 C 0.08 0.40 6.71 22.38 0.15 0.55 16 10 F -0.14 -0.89 12.93 44.97 0.58 -0.31 16 11 C -0.16 -0.34 10.03 22.31 0.22 -0.12 16 12 C -0.09 0.02 10.04 22.26 0.22 0.24 16 13 C -0.13 -0.06 10.05 22.28 0.22 0.16 16 14 C -0.07 -0.16 7.65 22.26 0.17 0.01 16 15 C -0.18 -0.38 6.99 31.21 0.22 -0.16 16 16 C 0.07 -0.12 5.58 31.22 0.17 0.05 16 17 H 0.14 -1.07 8.14 -2.39 -0.02 -1.09 16 18 F -0.22 -1.20 17.41 44.97 0.78 -0.42 16 19 C -0.14 0.57 6.94 31.12 0.22 0.79 16 20 C -0.09 0.45 10.34 22.58 0.23 0.68 16 21 C -0.19 0.49 6.15 22.04 0.14 0.62 16 22 Br 0.09 -0.39 28.25 -20.37 -0.58 -0.97 16 23 C 0.06 -0.05 6.14 41.34 0.25 0.21 16 24 C -0.04 0.04 2.87 71.23 0.20 0.25 16 25 O -0.54 0.13 10.27 -148.98 -1.53 -1.40 16 26 Si 0.63 0.73 27.11 68.60 1.86 2.59 16 27 H 0.09 -0.20 8.14 -2.39 -0.02 -0.22 16 28 H 0.09 0.21 6.52 -2.39 -0.02 0.20 16 29 H 0.11 -0.17 6.48 -2.39 -0.02 -0.18 16 30 H 0.42 -5.04 7.53 -92.71 -0.70 -5.73 16 31 H 0.15 -0.15 8.06 -2.91 -0.02 -0.17 16 32 H 0.16 -0.83 8.06 -2.91 -0.02 -0.85 16 33 H 0.14 -0.50 8.06 -2.91 -0.02 -0.52 16 34 H 0.12 0.15 5.68 -2.91 -0.02 0.13 16 35 H 0.08 0.28 8.14 -2.39 -0.02 0.26 16 36 H 0.10 0.63 5.24 -2.38 -0.01 0.61 16 37 H 0.10 -0.08 6.90 -2.39 -0.02 -0.09 16 38 H 0.12 -1.28 8.12 -2.39 -0.02 -1.30 16 39 H 0.19 -2.33 7.45 -2.91 -0.02 -2.35 16 40 H 0.14 -0.42 7.96 -2.39 -0.02 -0.43 16 41 H 0.39 -1.77 8.70 -74.05 -0.64 -2.41 16 42 H -0.28 -1.65 7.11 99.48 0.71 -0.95 16 43 H -0.27 -2.11 7.11 99.48 0.71 -1.40 16 Total: 0.00 -17.89 366.81 1.48 -16.41 By element: Atomic # 1 Polarization: -16.31 SS G_CDS: -0.19 Total: -16.50 kcal Atomic # 6 Polarization: 0.46 SS G_CDS: 4.30 Total: 4.76 kcal Atomic # 7 Polarization: 3.38 SS G_CDS: -3.70 Total: -0.31 kcal Atomic # 8 Polarization: -3.67 SS G_CDS: -1.58 Total: -5.25 kcal Atomic # 9 Polarization: -2.10 SS G_CDS: 1.36 Total: -0.73 kcal Atomic # 14 Polarization: 0.73 SS G_CDS: 1.86 Total: 2.59 kcal Atomic # 35 Polarization: -0.39 SS G_CDS: -0.58 Total: -0.97 kcal Total: -17.89 1.48 -16.41 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_5000100.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.700 kcal (2) G-P(sol) polarization free energy of solvation -17.887 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.588 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.476 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.411 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.111 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds