Wall clock time and date at job start Tue Mar 9 2021 13:35:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86297 * 109.47205 * 2 1 4 4 C 1.50694 * 109.47328 * 120.00365 * 2 1 3 5 5 C 1.35454 * 125.56626 * 245.02493 * 4 2 1 6 6 C 1.39835 * 107.86590 * 179.97438 * 5 4 2 7 7 C 1.37871 * 107.08355 * 359.97438 * 6 5 4 8 8 C 1.46683 * 126.22745 * 179.97438 * 7 6 5 9 9 O 1.21690 * 120.00224 * 0.02811 * 8 7 6 10 10 N 1.34774 * 119.99745 * 180.02562 * 8 7 6 11 11 C 1.46506 * 120.00175 * 180.02562 * 10 8 7 12 12 C 1.50701 * 112.84143 * 311.19595 * 11 10 8 13 13 C 1.38444 * 120.00847 * 170.33488 * 12 11 10 14 14 F 1.35099 * 120.02239 * 0.02562 * 13 12 11 15 15 C 1.38478 * 119.94923 * 179.97438 * 13 12 11 16 16 C 1.38171 * 119.97547 * 0.02562 * 15 13 12 17 17 C 1.38271 * 120.02720 * 359.97438 * 16 15 13 18 18 C 1.38217 * 120.02072 * 350.05635 * 12 11 10 19 19 C 1.53775 * 113.61344 * 180.02562 * 11 10 8 20 20 C 1.53772 * 87.08164 * 270.88087 * 19 11 10 21 21 H 1.09002 * 113.61599 * 89.12134 * 20 19 11 22 22 F 1.39903 * 113.61442 * 220.02199 * 20 19 11 23 23 C 1.53772 * 113.61477 * 82.49879 * 11 10 8 24 24 N 1.35533 * 125.56422 * 65.01806 * 4 2 1 25 25 H 0.96700 * 113.99996 * 300.00192 * 1 2 3 26 26 H 1.09009 * 109.46710 * 240.00350 * 2 1 3 27 27 H 1.48498 * 110.00348 * 299.99986 * 3 2 1 28 28 H 1.48500 * 110.00045 * 61.32498 * 3 2 1 29 29 H 1.07998 * 126.06414 * 0.26265 * 5 4 2 30 30 H 1.07997 * 126.45558 * 179.97438 * 6 5 4 31 31 H 0.97006 * 120.00117 * 359.97438 * 10 8 7 32 32 H 1.07997 * 120.01366 * 179.97438 * 15 13 12 33 33 H 1.07998 * 119.98892 * 179.97438 * 16 15 13 34 34 H 1.07998 * 119.98110 * 180.02562 * 17 16 15 35 35 H 1.08003 * 119.98375 * 0.02562 * 18 12 11 36 36 H 1.08997 * 113.61730 * 25.43632 * 19 11 10 37 37 H 1.09001 * 113.61110 * 156.24608 * 19 11 10 38 38 H 1.09006 * 113.61470 * 203.66292 * 23 11 10 39 39 H 1.08997 * 113.61775 * 334.57202 * 23 11 10 40 40 H 0.97004 * 125.67975 * 359.97438 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6326 -0.1394 2.2388 6 6 2.9069 -1.1310 3.1858 7 6 2.3524 -2.3030 2.7172 8 6 2.3933 -3.6088 3.3843 9 8 2.9568 -3.7270 4.4564 10 7 1.8067 -4.6776 2.8099 11 6 1.8470 -5.9816 3.4763 12 6 3.2305 -6.3596 3.9391 13 6 3.4096 -7.4605 4.7591 14 9 2.3445 -8.1968 5.1445 15 6 4.6815 -7.8070 5.1832 16 6 5.7702 -7.0536 4.7879 17 6 5.5901 -5.9542 3.9689 18 6 4.3217 -5.6108 3.5403 19 6 1.1339 -7.0962 2.6927 20 6 -0.1480 -6.6940 3.4407 21 1 -0.7235 -5.9185 2.9351 22 9 -0.9316 -7.7836 3.8356 23 6 0.7654 -6.1556 4.5555 24 7 1.7551 -2.0252 1.5086 25 1 -0.3933 0.4417 0.7650 26 1 1.7922 -0.5138 -0.8901 27 1 1.5615 2.4679 -1.2084 28 1 1.5880 2.4585 1.2243 29 1 2.9237 0.8987 2.3024 30 1 3.4507 -1.0028 4.1100 31 1 1.3571 -4.5833 1.9555 32 1 4.8224 -8.6654 5.8233 33 1 6.7622 -7.3234 5.1189 34 1 6.4416 -5.3660 3.6600 35 1 4.1826 -4.7543 2.8972 36 1 1.0883 -6.9145 1.6189 37 1 1.4882 -8.0975 2.9377 38 1 1.0179 -6.9000 5.3107 39 1 0.4221 -5.2146 4.9853 40 1 1.2851 -2.6637 0.9498 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17636826_6580494.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:35:38 Heat of formation + Delta-G solvation = -37.503195 kcal Electronic energy + Delta-G solvation = -29333.495675 eV Core-core repulsion = 24946.202319 eV Total energy + Delta-G solvation = -4387.293356 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.112 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -50.04311 -48.54357 -42.74303 -41.66003 -39.39493 -38.79992 -37.94622 -34.52042 -32.37918 -32.11656 -31.35382 -31.33578 -27.33252 -27.23933 -25.95073 -23.95811 -23.48779 -22.68691 -21.79845 -21.24763 -20.74865 -20.07325 -18.72509 -18.33774 -17.94496 -17.19070 -17.11195 -16.90148 -16.84497 -16.73089 -16.38820 -16.16652 -15.86044 -15.74118 -15.30663 -15.18899 -14.95978 -14.69256 -14.47454 -14.26002 -14.08579 -13.93522 -13.82374 -13.68451 -13.53290 -12.99864 -12.83638 -12.73011 -12.43831 -12.14593 -11.97419 -11.63221 -11.49579 -11.33893 -10.96567 -10.49365 -10.18064 -9.80718 -9.57585 -9.37438 -5.04160 0.15704 0.20035 0.32832 1.03269 1.45310 1.53009 1.65726 1.76811 2.04153 2.21379 2.56889 2.99308 3.09579 3.12194 3.25113 3.27454 3.40889 3.45042 3.60612 3.63110 3.83285 3.92223 4.09135 4.13413 4.17754 4.30472 4.33950 4.37320 4.41405 4.49251 4.50648 4.75368 4.81968 4.90328 4.92979 4.98893 5.06368 5.09269 5.29931 5.39579 5.48259 5.49106 5.71737 5.91584 6.05511 6.14963 6.23953 6.95095 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.027 3.973 5 C -0.199 4.199 6 C -0.094 4.094 7 C -0.054 4.054 8 C 0.588 3.412 9 O -0.501 6.501 10 N -0.715 5.715 11 C 0.201 3.799 12 C -0.105 4.105 13 C 0.105 3.895 14 F -0.132 7.132 15 C -0.153 4.153 16 C -0.087 4.087 17 C -0.128 4.128 18 C -0.054 4.054 19 C -0.154 4.154 20 C 0.071 3.929 21 H 0.109 0.891 22 F -0.199 7.199 23 C -0.174 4.174 24 N -0.524 5.524 25 H 0.381 0.619 26 H 0.120 0.880 27 H -0.255 1.255 28 H -0.254 1.254 29 H 0.152 0.848 30 H 0.154 0.846 31 H 0.399 0.601 32 H 0.138 0.862 33 H 0.134 0.866 34 H 0.130 0.870 35 H 0.123 0.877 36 H 0.090 0.910 37 H 0.115 0.885 38 H 0.125 0.875 39 H 0.086 0.914 40 H 0.416 0.584 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.808 2.258 -4.253 5.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.171 4.171 3 Si 0.617 3.383 4 C -0.091 4.091 5 C -0.224 4.224 6 C -0.120 4.120 7 C -0.167 4.167 8 C 0.376 3.624 9 O -0.375 6.375 10 N -0.368 5.368 11 C 0.114 3.886 12 C -0.107 4.107 13 C 0.085 3.915 14 F -0.111 7.111 15 C -0.172 4.172 16 C -0.105 4.105 17 C -0.147 4.147 18 C -0.072 4.072 19 C -0.192 4.192 20 C 0.034 3.966 21 H 0.126 0.874 22 F -0.179 7.179 23 C -0.213 4.213 24 N -0.121 5.121 25 H 0.229 0.771 26 H 0.138 0.862 27 H -0.180 1.180 28 H -0.179 1.179 29 H 0.169 0.831 30 H 0.171 0.829 31 H 0.234 0.766 32 H 0.156 0.844 33 H 0.152 0.848 34 H 0.148 0.852 35 H 0.141 0.859 36 H 0.109 0.891 37 H 0.133 0.867 38 H 0.143 0.857 39 H 0.105 0.895 40 H 0.254 0.746 Dipole moment (debyes) X Y Z Total from point charges 2.945 2.501 -4.056 5.602 hybrid contribution -1.771 -0.638 -0.058 1.884 sum 1.173 1.864 -4.114 4.667 Atomic orbital electron populations 1.86602 1.17503 1.80218 1.49708 1.24910 0.84099 1.11890 0.96233 0.94234 0.91381 0.72098 0.80625 1.21114 1.04385 0.84156 0.99438 1.20755 1.05990 1.00357 0.95255 1.21342 1.00575 0.89985 1.00112 1.20395 1.10260 0.95663 0.90400 1.17027 0.78506 0.81899 0.84930 1.90963 1.42439 1.83833 1.20243 1.45597 1.58717 1.07725 1.24730 1.19527 0.91488 0.83035 0.94552 1.19365 0.94680 0.96065 1.00610 1.17337 0.83935 0.91692 0.98491 1.91403 1.54344 1.75754 1.89577 1.21117 0.90917 1.02341 1.02845 1.21067 0.98669 0.94347 0.96443 1.21203 0.97275 0.97523 0.98661 1.20815 0.91380 0.97139 0.97869 1.24032 0.94641 0.99927 1.00626 1.23025 0.89429 0.86888 0.97208 0.87373 1.92842 1.76776 1.56491 1.91828 1.24439 0.94339 1.04323 0.98176 1.41962 1.43202 1.09404 1.17519 0.77093 0.86241 1.17999 1.17864 0.83090 0.82875 0.76564 0.84450 0.84829 0.85250 0.85905 0.89132 0.86657 0.85704 0.89494 0.74645 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.63 12.88 -35.23 -0.45 0.18 16 2 C -0.06 0.16 3.08 36.00 0.11 0.27 16 3 Si 0.72 -2.09 30.56 -169.99 -5.19 -7.28 16 4 C 0.03 -0.05 6.46 -81.95 -0.53 -0.58 16 5 C -0.20 0.23 9.32 -39.98 -0.37 -0.14 16 6 C -0.09 -0.03 10.65 -39.12 -0.42 -0.45 16 7 C -0.05 0.01 7.06 -81.98 -0.58 -0.57 16 8 C 0.59 0.55 5.72 -12.85 -0.07 0.48 16 9 O -0.50 -2.22 14.08 5.20 0.07 -2.15 16 10 N -0.72 1.05 4.84 -49.22 -0.24 0.81 16 11 C 0.20 0.04 1.06 -132.16 -0.14 -0.10 16 12 C -0.11 -0.20 4.56 -104.55 -0.48 -0.68 16 13 C 0.11 0.25 6.71 -39.42 -0.26 -0.01 16 14 F -0.13 -0.38 12.93 2.25 0.03 -0.35 16 15 C -0.15 -0.20 10.03 -39.52 -0.40 -0.60 16 16 C -0.09 -0.04 10.04 -39.59 -0.40 -0.44 16 17 C -0.13 -0.12 10.04 -39.57 -0.40 -0.52 16 18 C -0.05 -0.10 7.38 -39.59 -0.29 -0.39 16 19 C -0.15 0.16 6.93 -25.93 -0.18 -0.02 16 20 C 0.07 -0.01 5.58 -25.89 -0.14 -0.15 16 21 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 22 F -0.20 -0.61 17.41 2.25 0.04 -0.57 16 23 C -0.17 -0.21 6.99 -25.89 -0.18 -0.39 16 24 N -0.52 1.20 5.99 -5.70 -0.03 1.16 16 25 H 0.38 -1.34 8.70 45.56 0.40 -0.94 16 26 H 0.12 -0.44 7.96 -51.92 -0.41 -0.85 16 27 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 28 H -0.25 0.19 7.11 56.52 0.40 0.59 16 29 H 0.15 -0.42 6.19 -52.49 -0.33 -0.75 16 30 H 0.15 0.03 8.06 -52.49 -0.42 -0.39 16 31 H 0.40 -1.77 7.76 -40.82 -0.32 -2.09 16 32 H 0.14 -0.05 8.06 -52.49 -0.42 -0.47 16 33 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 34 H 0.13 -0.11 8.06 -52.49 -0.42 -0.54 16 35 H 0.12 0.17 5.58 -52.48 -0.29 -0.13 16 36 H 0.09 -0.30 8.12 -51.93 -0.42 -0.72 16 37 H 0.12 0.00 6.93 -51.93 -0.36 -0.36 16 38 H 0.13 0.31 5.23 -51.93 -0.27 0.04 16 39 H 0.09 0.15 8.14 -51.93 -0.42 -0.28 16 40 H 0.42 -1.91 8.19 -40.82 -0.33 -2.24 16 LS Contribution 337.71 15.07 5.09 5.09 Total: 0.00 -8.06 337.71 -9.49 -17.56 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -4.07 Total: -10.16 kcal Atomic # 6 Polarization: 0.44 SS G_CDS: -4.73 Total: -4.29 kcal Atomic # 7 Polarization: 2.25 SS G_CDS: -0.27 Total: 1.97 kcal Atomic # 8 Polarization: -1.59 SS G_CDS: -0.38 Total: -1.97 kcal Atomic # 9 Polarization: -0.98 SS G_CDS: 0.07 Total: -0.91 kcal Atomic # 14 Polarization: -2.09 SS G_CDS: -5.19 Total: -7.28 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -8.06 -9.49 -17.56 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17636826_6580494.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.948 kcal (2) G-P(sol) polarization free energy of solvation -8.061 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.009 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.555 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.503 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds