Wall clock time and date at job start Tue Mar 9 2021 13:36:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 O 1.42904 * 109.46703 * 2 1 4 4 C 1.35898 * 117.00100 * 84.95254 * 3 2 1 5 5 C 1.38736 * 120.05564 * 174.27361 * 4 3 2 6 6 C 1.38147 * 119.94498 * 179.74105 * 5 4 3 7 7 C 1.38271 * 120.05444 * 0.50934 * 6 5 4 8 8 C 1.50695 * 119.94468 * 179.74247 * 7 6 5 9 9 O 1.42904 * 109.47336 * 245.02144 * 8 7 6 10 10 Si 1.86297 * 109.47142 * 5.02562 * 8 7 6 11 11 C 1.38270 * 120.10937 * 359.76834 * 7 6 5 12 12 C 1.38144 * 120.05778 * 359.97438 * 11 7 6 13 13 C 1.50696 * 109.47096 * 239.99936 * 2 1 3 14 14 O 1.21286 * 119.99431 * 114.99986 * 13 2 1 15 15 N 1.34766 * 120.00206 * 294.99549 * 13 2 1 16 16 C 1.46496 * 120.00502 * 180.02562 * 15 13 2 17 17 C 1.50707 * 112.84684 * 50.33546 * 16 15 13 18 18 C 1.38442 * 120.01038 * 189.66815 * 17 16 15 19 19 F 1.35091 * 120.02620 * 359.95722 * 18 17 16 20 20 C 1.38485 * 119.94600 * 180.22646 * 18 17 16 21 21 C 1.38184 * 119.97189 * 359.47637 * 20 18 17 22 22 C 1.38268 * 120.02409 * 0.55046 * 21 20 18 23 23 C 1.38215 * 120.01161 * 9.64586 * 17 16 15 24 24 C 1.53784 * 113.61534 * 279.14084 * 16 15 13 25 25 C 1.53950 * 87.02135 * 270.76703 * 24 16 15 26 26 H 1.09001 * 113.74484 * 220.06249 * 25 24 16 27 27 O 1.42901 * 113.53831 * 89.18512 * 25 24 16 28 28 C 1.53776 * 113.61875 * 181.53346 * 16 15 13 29 29 H 1.08997 * 109.47173 * 60.00063 * 1 2 3 30 30 H 1.08999 * 109.46994 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47254 * 300.00365 * 1 2 3 32 32 H 1.09003 * 109.46901 * 119.99298 * 2 1 3 33 33 H 1.07999 * 120.03118 * 359.97438 * 5 4 3 34 34 H 1.07998 * 119.97272 * 180.27261 * 6 5 4 35 35 H 1.09001 * 109.46773 * 125.01976 * 8 7 6 36 36 H 0.96698 * 113.99758 * 179.97438 * 9 8 7 37 37 H 1.48504 * 110.00072 * 178.68314 * 10 8 7 38 38 H 1.48504 * 109.99903 * 299.99433 * 10 8 7 39 39 H 1.08001 * 119.96929 * 180.02562 * 11 7 6 40 40 H 1.07996 * 120.02818 * 179.97438 * 12 11 7 41 41 H 0.97006 * 120.00098 * 0.02562 * 15 13 2 42 42 H 1.07993 * 120.01180 * 179.74887 * 20 18 17 43 43 H 1.07994 * 119.98420 * 180.29101 * 21 20 18 44 44 H 1.07999 * 119.97105 * 179.72354 * 22 21 20 45 45 H 1.08001 * 119.99045 * 0.04150 * 23 17 16 46 46 H 1.08998 * 113.61262 * 25.35079 * 24 16 15 47 47 H 1.09003 * 113.61176 * 156.24479 * 24 16 15 48 48 H 0.96699 * 113.99658 * 82.50632 * 27 25 24 49 49 H 1.09008 * 113.61855 * 203.75176 * 28 16 15 50 50 H 1.09000 * 113.61539 * 334.56549 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 2.1114 1.9646 1.2062 5 6 2.6775 3.2282 1.2930 6 6 2.7784 3.8557 2.5196 7 6 2.3254 3.2212 3.6615 8 6 2.4420 3.9056 4.9990 9 8 3.3411 3.1719 5.8328 10 14 3.0907 5.6352 4.7570 11 6 1.7661 1.9594 3.5783 12 6 1.6581 1.3298 2.3534 13 6 2.0323 -0.7104 -1.2304 14 8 2.6530 -0.0978 -2.0734 15 7 1.7920 -2.0263 -1.3941 16 6 2.2808 -2.7171 -2.5899 17 6 3.7427 -2.4646 -2.8551 18 6 4.3112 -2.8765 -4.0483 19 9 3.5562 -3.5058 -4.9751 20 6 5.6558 -2.6480 -4.2886 21 6 6.4258 -1.9996 -3.3420 22 6 5.8569 -1.5891 -2.1505 23 6 4.5161 -1.8213 -1.9074 24 6 1.3871 -2.5172 -3.8254 25 6 0.6073 -3.7615 -3.3630 26 1 0.3128 -4.4228 -4.1779 27 8 -0.4710 -3.4616 -2.4744 28 6 1.8927 -4.2041 -2.6443 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 1.8933 -0.5137 0.8901 33 1 3.0356 3.7225 0.4021 34 1 3.2150 4.8412 2.5872 35 1 1.4609 3.9484 5.4719 36 1 3.4648 3.5562 6.7115 37 1 3.1802 6.3317 6.0655 38 1 4.4280 5.5905 4.1129 39 1 1.4126 1.4660 4.4716 40 1 1.2215 0.3441 2.2890 41 1 1.2953 -2.5162 -0.7200 42 1 6.1013 -2.9725 -5.2173 43 1 7.4732 -1.8171 -3.5312 44 1 6.4605 -1.0864 -1.4094 45 1 4.0729 -1.5001 -0.9764 46 1 0.8017 -1.5982 -3.7967 47 1 1.9114 -2.6569 -4.7707 48 1 -1.2822 -3.1826 -2.9206 49 1 2.5555 -4.8060 -3.2662 50 1 1.7163 -4.6455 -1.6634 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_10157680.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:36:07 Heat of formation + Delta-G solvation = -82.204162 kcal Electronic energy + Delta-G solvation = -37011.215239 eV Core-core repulsion = 32080.197628 eV Total energy + Delta-G solvation = -4931.017611 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.20 seconds Orbital eigenvalues (eV) -50.01145 -42.23410 -41.34088 -39.84472 -39.36830 -38.75210 -37.31169 -36.29142 -34.42859 -32.92598 -32.06882 -31.91292 -31.32382 -31.26063 -27.04360 -26.80541 -26.22366 -25.15761 -24.13300 -23.58111 -22.86926 -22.23451 -21.38918 -20.63267 -19.44666 -18.88190 -18.57279 -18.43358 -18.14571 -17.55850 -17.06097 -16.93987 -16.78913 -16.69068 -16.68113 -16.48597 -15.97470 -15.75914 -15.58430 -15.35831 -15.22402 -14.92731 -14.60833 -14.40565 -14.32437 -14.24922 -13.88504 -13.87319 -13.78814 -13.73342 -13.63433 -13.41022 -13.32230 -12.91893 -12.89748 -12.47747 -12.35089 -12.32826 -12.06486 -11.94876 -11.87244 -11.68066 -11.62254 -10.95167 -10.74361 -10.47699 -10.18505 -9.99462 -9.73469 -9.50688 -9.14699 -4.96131 0.22239 0.28990 0.33811 0.39385 1.28816 1.42946 1.50625 1.59371 1.95725 2.43394 2.64063 2.65383 2.90799 3.29550 3.32943 3.37588 3.38844 3.46156 3.57391 3.66560 3.70170 3.77518 3.82301 3.86113 3.90807 3.92779 4.07549 4.23183 4.24317 4.31726 4.37364 4.37977 4.44230 4.49334 4.59306 4.59613 4.62018 4.63823 4.78470 4.87259 4.89818 4.95439 4.97332 5.02426 5.11122 5.13512 5.22187 5.33769 5.36911 5.50755 5.54392 5.57139 5.69704 5.96619 6.27710 6.41971 6.44718 6.53617 7.13511 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.067 3.933 3 O -0.283 6.283 4 C 0.135 3.865 5 C -0.141 4.141 6 C -0.074 4.074 7 C -0.111 4.111 8 C -0.071 4.071 9 O -0.537 6.537 10 Si 0.681 3.319 11 C -0.050 4.050 12 C -0.212 4.212 13 C 0.515 3.485 14 O -0.497 6.497 15 N -0.696 5.696 16 C 0.203 3.797 17 C -0.105 4.105 18 C 0.103 3.897 19 F -0.135 7.135 20 C -0.153 4.153 21 C -0.090 4.090 22 C -0.128 4.128 23 C -0.057 4.057 24 C -0.184 4.184 25 C 0.083 3.917 26 H 0.077 0.923 27 O -0.551 6.551 28 C -0.125 4.125 29 H 0.076 0.924 30 H 0.082 0.918 31 H 0.078 0.922 32 H 0.098 0.902 33 H 0.138 0.862 34 H 0.134 0.866 35 H 0.075 0.925 36 H 0.379 0.621 37 H -0.262 1.262 38 H -0.255 1.255 39 H 0.128 0.872 40 H 0.132 0.868 41 H 0.409 0.591 42 H 0.137 0.863 43 H 0.133 0.867 44 H 0.128 0.872 45 H 0.120 0.880 46 H 0.079 0.921 47 H 0.117 0.883 48 H 0.385 0.615 49 H 0.113 0.887 50 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.632 -1.598 1.938 4.416 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.007 3.993 3 O -0.195 6.195 4 C 0.090 3.910 5 C -0.160 4.160 6 C -0.091 4.091 7 C -0.111 4.111 8 C -0.180 4.180 9 O -0.344 6.344 10 Si 0.582 3.418 11 C -0.068 4.068 12 C -0.230 4.230 13 C 0.300 3.700 14 O -0.370 6.370 15 N -0.350 5.350 16 C 0.116 3.884 17 C -0.107 4.107 18 C 0.084 3.916 19 F -0.113 7.113 20 C -0.172 4.172 21 C -0.108 4.108 22 C -0.146 4.146 23 C -0.076 4.076 24 C -0.222 4.222 25 C 0.024 3.976 26 H 0.095 0.905 27 O -0.357 6.357 28 C -0.163 4.163 29 H 0.095 0.905 30 H 0.101 0.899 31 H 0.097 0.903 32 H 0.116 0.884 33 H 0.156 0.844 34 H 0.151 0.849 35 H 0.093 0.907 36 H 0.227 0.773 37 H -0.187 1.187 38 H -0.179 1.179 39 H 0.146 0.854 40 H 0.149 0.851 41 H 0.245 0.755 42 H 0.155 0.845 43 H 0.151 0.849 44 H 0.146 0.854 45 H 0.138 0.862 46 H 0.098 0.902 47 H 0.135 0.865 48 H 0.233 0.767 49 H 0.131 0.869 50 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.060 -1.046 1.200 2.603 hybrid contribution -0.499 -0.766 1.006 1.360 sum -2.560 -1.812 2.206 3.834 Atomic orbital electron populations 1.22337 0.92079 1.04181 1.04710 1.22178 0.96164 0.83204 0.97742 1.86222 1.80927 1.25383 1.26970 1.19063 0.95118 0.92855 0.83993 1.20380 1.03293 0.93665 0.98652 1.20815 0.97577 0.99277 0.91461 1.19141 1.02778 0.96159 0.93027 1.24718 0.96518 1.05717 0.91077 1.86596 1.66409 1.52631 1.28795 0.95059 0.85485 0.76921 0.84316 1.20771 0.95719 0.93446 0.96873 1.21301 1.07325 1.01796 0.92608 1.20045 0.80144 0.82101 0.87751 1.90836 1.37796 1.65367 1.42992 1.45412 1.57826 1.08601 1.23174 1.19761 0.88863 0.93148 0.86606 1.19594 0.95044 1.01980 0.94111 1.17293 0.89485 0.98144 0.86722 1.91365 1.75286 1.79891 1.64781 1.21106 0.92118 1.02447 1.01515 1.21042 1.00132 0.96585 0.93043 1.21208 0.95061 1.00481 0.97831 1.20790 0.93265 0.95091 0.98414 1.24475 0.98810 0.99926 0.99013 1.22681 0.87058 0.95725 0.92138 0.90526 1.86365 1.23522 1.89679 1.36161 1.23444 0.95863 0.93965 1.03021 0.90526 0.89897 0.90350 0.88438 0.84441 0.84891 0.90731 0.77336 1.18698 1.17925 0.85449 0.85076 0.75459 0.84535 0.84913 0.85410 0.86198 0.90187 0.86509 0.76719 0.86896 0.89365 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.29 9.13 37.16 0.34 0.63 16 2 C 0.07 0.02 2.64 -27.88 -0.07 -0.06 16 3 O -0.28 -0.89 9.34 -39.28 -0.37 -1.26 16 4 C 0.14 0.31 6.60 -39.21 -0.26 0.05 16 5 C -0.14 -0.29 9.99 -39.43 -0.39 -0.68 16 6 C -0.07 -0.09 8.66 -39.60 -0.34 -0.43 16 7 C -0.11 -0.16 5.39 -104.60 -0.56 -0.72 16 8 C -0.07 0.00 2.79 36.00 0.10 0.10 16 9 O -0.54 -0.69 12.81 -35.23 -0.45 -1.14 16 10 Si 0.68 -0.45 29.85 -169.99 -5.07 -5.52 16 11 C -0.05 -0.06 9.68 -39.60 -0.38 -0.44 16 12 C -0.21 -0.17 8.24 -39.43 -0.33 -0.49 16 13 C 0.52 1.05 5.12 -10.99 -0.06 0.99 16 14 O -0.50 -3.07 13.89 -14.31 -0.20 -3.26 16 15 N -0.70 0.10 4.33 -47.93 -0.21 -0.11 16 16 C 0.20 0.18 1.03 -132.16 -0.14 0.04 16 17 C -0.11 -0.28 4.57 -104.55 -0.48 -0.76 16 18 C 0.10 0.27 6.71 -39.41 -0.26 0.00 16 19 F -0.13 -0.29 12.93 2.25 0.03 -0.26 16 20 C -0.15 -0.27 10.03 -39.51 -0.40 -0.66 16 21 C -0.09 -0.12 10.04 -39.59 -0.40 -0.52 16 22 C -0.13 -0.27 10.04 -39.58 -0.40 -0.67 16 23 C -0.06 -0.17 7.48 -39.59 -0.30 -0.47 16 24 C -0.18 -0.15 6.92 -25.83 -0.18 -0.33 16 25 C 0.08 -0.10 5.28 -25.83 -0.14 -0.23 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 27 O -0.55 0.94 12.96 -35.23 -0.46 0.48 16 28 C -0.13 0.10 6.88 -25.92 -0.18 -0.08 16 29 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.08 -0.28 7.92 -51.93 -0.41 -0.70 16 31 H 0.08 -0.16 6.91 -51.93 -0.36 -0.52 16 32 H 0.10 -0.17 6.31 -51.93 -0.33 -0.50 16 33 H 0.14 0.16 8.06 -52.49 -0.42 -0.26 16 34 H 0.13 -0.07 4.86 -52.49 -0.26 -0.32 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 36 H 0.38 -1.01 8.74 45.56 0.40 -0.62 16 37 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 38 H -0.25 -0.63 7.05 56.52 0.40 -0.23 16 39 H 0.13 -0.01 8.06 -52.49 -0.42 -0.44 16 40 H 0.13 -0.20 5.43 -52.49 -0.29 -0.48 16 41 H 0.41 -0.92 8.26 -40.82 -0.34 -1.26 16 42 H 0.14 -0.01 8.06 -52.49 -0.42 -0.44 16 43 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 44 H 0.13 0.07 8.06 -52.49 -0.42 -0.35 16 45 H 0.12 0.33 5.64 -52.49 -0.30 0.03 16 46 H 0.08 0.17 8.14 -51.93 -0.42 -0.26 16 47 H 0.12 0.17 5.22 -51.93 -0.27 -0.10 16 48 H 0.38 -1.85 9.12 45.56 0.42 -1.43 16 49 H 0.11 -0.10 6.93 -51.92 -0.36 -0.46 16 50 H 0.09 -0.12 8.11 -51.93 -0.42 -0.55 16 LS Contribution 403.62 15.07 6.08 6.08 Total: 0.00 -9.69 403.62 -10.97 -20.65 By element: Atomic # 1 Polarization: -5.43 SS G_CDS: -5.51 Total: -10.94 kcal Atomic # 6 Polarization: 0.09 SS G_CDS: -4.82 Total: -4.73 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.21 Total: -0.11 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -1.47 Total: -5.18 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.03 Total: -0.26 kcal Atomic # 14 Polarization: -0.45 SS G_CDS: -5.07 Total: -5.52 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.69 -10.97 -20.65 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_10157680.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.552 kcal (2) G-P(sol) polarization free energy of solvation -9.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.967 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.653 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.20 seconds