Wall clock time and date at job start Tue Mar 9 2021 13:37:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.46954 * 2 1 4 4 C 1.50696 * 109.47763 * 119.99943 * 2 1 3 5 5 C 1.38401 * 119.82204 * 64.99977 * 4 2 1 6 6 C 1.37895 * 120.17104 * 180.02562 * 5 4 2 7 7 C 1.39840 * 119.82478 * 0.02562 * 6 5 4 8 8 C 1.47207 * 120.17135 * 179.97438 * 7 6 5 9 9 C 1.34808 * 120.00030 * 180.27726 * 8 7 6 10 10 C 1.46425 * 119.99920 * 179.72181 * 9 8 7 11 11 O 1.21693 * 120.00132 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99668 * 179.97438 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.97438 * 12 10 9 14 14 C 1.50703 * 112.84713 * 309.66620 * 13 12 10 15 15 C 1.38442 * 120.00957 * 170.05540 * 14 13 12 16 16 F 1.35104 * 120.02571 * 0.02562 * 15 14 13 17 17 C 1.38479 * 119.94710 * 179.76941 * 15 14 13 18 18 C 1.38174 * 119.97724 * 0.49150 * 17 15 14 19 19 C 1.38274 * 120.01886 * 359.78490 * 18 17 15 20 20 C 1.38209 * 120.01663 * 350.33769 * 14 13 12 21 21 C 1.53780 * 113.61356 * 178.47273 * 13 12 10 22 22 C 1.53773 * 87.07981 * 270.88260 * 21 13 12 23 23 H 1.09000 * 113.61627 * 219.93347 * 22 21 13 24 24 O 1.42898 * 113.61345 * 89.11984 * 22 21 13 25 25 C 1.53776 * 113.61295 * 80.86436 * 13 12 10 26 26 C 1.39838 * 119.66008 * 0.25314 * 7 6 5 27 27 C 1.37891 * 119.82419 * 359.51134 * 26 7 6 28 28 H 0.96696 * 114.00073 * 299.99351 * 1 2 3 29 29 H 1.09005 * 109.47028 * 240.00435 * 2 1 3 30 30 H 1.48502 * 110.00141 * 178.68185 * 3 2 1 31 31 H 1.48507 * 110.00224 * 300.00356 * 3 2 1 32 32 H 1.07996 * 119.92056 * 0.02562 * 5 4 2 33 33 H 1.07999 * 120.08848 * 179.97438 * 6 5 4 34 34 H 1.08002 * 119.99660 * 359.97438 * 8 7 6 35 35 H 1.08001 * 119.99718 * 359.71499 * 9 8 7 36 36 H 0.97000 * 120.00483 * 0.02562 * 12 10 9 37 37 H 1.08001 * 120.01167 * 180.24599 * 17 15 14 38 38 H 1.07996 * 119.99169 * 179.76370 * 18 17 15 39 39 H 1.08005 * 119.96913 * 179.97438 * 19 18 17 40 40 H 1.08007 * 119.98788 * 359.97438 * 20 14 13 41 41 H 1.08998 * 113.61426 * 25.43420 * 21 13 12 42 42 H 1.08995 * 113.61426 * 156.33366 * 21 13 12 43 43 H 0.96704 * 114.00234 * 180.02562 * 24 22 21 44 44 H 1.09007 * 113.61208 * 203.66362 * 25 13 12 45 45 H 1.08999 * 113.61822 * 334.56854 * 25 13 12 46 46 H 1.07992 * 120.08794 * 179.75001 * 26 7 6 47 47 H 1.08006 * 119.91926 * 180.22743 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7103 1.2304 5 6 1.6825 -2.0618 1.3948 6 6 2.1385 -2.7189 2.5181 7 6 2.8536 -2.0159 3.4928 8 6 3.3435 -2.7096 4.6952 9 6 4.0277 -2.0274 5.6353 10 6 4.5096 -2.7161 6.8342 11 8 4.2922 -3.9043 6.9822 12 7 5.1941 -2.0341 7.7738 13 6 5.6758 -2.7231 8.9736 14 6 4.6004 -3.5265 9.6586 15 6 4.9327 -4.3978 10.6818 16 9 6.2211 -4.5281 11.0671 17 6 3.9429 -5.1318 11.3135 18 6 2.6262 -5.0015 10.9153 19 6 2.2963 -4.1351 9.8893 20 6 3.2828 -3.3980 9.2616 21 6 6.4692 -1.8155 9.9284 22 6 7.7250 -2.2094 9.1332 23 1 8.6029 -2.3754 9.7575 24 8 7.9897 -1.3532 8.0201 25 6 6.9820 -3.5041 8.7528 26 6 3.0960 -0.6493 3.3221 27 6 2.6377 -0.0075 2.1910 28 1 -0.3933 0.4416 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 3.5345 1.7704 0.0321 31 1 1.5613 2.4680 -1.2085 32 1 1.1298 -2.6033 0.6414 33 1 1.9432 -3.7734 2.6452 34 1 3.1505 -3.7641 4.8265 35 1 4.2204 -0.9728 5.5040 36 1 5.3672 -1.0870 7.6560 37 1 4.2004 -5.8089 12.1145 38 1 1.8545 -5.5766 11.4052 39 1 1.2669 -4.0341 9.5784 40 1 3.0238 -2.7214 8.4606 41 1 6.2112 -0.7599 9.8426 42 1 6.4772 -2.1677 10.9598 43 1 8.7782 -1.5961 7.5157 44 1 7.1299 -4.3173 9.4635 45 1 7.1378 -3.8109 7.7186 46 1 3.6440 -0.0988 4.0724 47 1 2.8272 1.0472 2.0559 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_12360594.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:05 Heat of formation + Delta-G solvation = -37.585950 kcal Electronic energy + Delta-G solvation = -32899.880086 eV Core-core repulsion = 28316.790936 eV Total energy + Delta-G solvation = -4583.089150 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.141 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -49.98832 -41.99124 -40.72470 -39.58739 -39.33368 -37.81848 -36.28639 -35.05749 -33.87125 -32.29514 -31.97808 -31.24053 -31.18580 -27.39146 -26.99524 -25.89838 -24.33845 -23.97354 -23.47839 -22.72029 -21.99328 -20.58200 -20.45674 -18.96222 -18.64834 -18.23081 -18.02903 -17.59770 -17.17047 -16.93242 -16.72968 -16.55017 -16.47827 -16.24816 -15.90565 -15.75815 -15.46808 -15.24684 -15.12263 -14.80560 -14.62477 -14.57111 -14.22784 -14.15668 -13.86039 -13.73940 -13.64877 -13.44722 -13.32254 -13.03768 -12.88950 -12.45164 -12.30289 -12.26701 -12.08052 -11.85742 -11.78650 -11.63433 -11.35233 -10.97160 -10.78467 -10.49521 -10.09667 -10.07114 -9.71485 -9.48732 -9.29336 -5.09797 -0.58739 0.24488 0.30308 0.36397 0.88638 1.22372 1.57965 1.92246 2.06092 2.27278 2.66773 2.75678 2.95145 3.33528 3.37644 3.39047 3.47758 3.52752 3.58010 3.66615 3.74531 3.77073 3.81403 3.91256 4.07262 4.11114 4.18841 4.24611 4.28748 4.36291 4.40689 4.46120 4.47381 4.62929 4.64185 4.75398 4.84117 4.88390 4.92346 4.92948 4.99988 5.02501 5.08665 5.13758 5.17708 5.31251 5.39846 5.41361 5.54032 5.54510 5.65388 5.80925 5.98929 6.49929 6.52636 6.59703 7.28762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.071 4.071 3 Si 0.686 3.314 4 C -0.108 4.108 5 C -0.095 4.095 6 C -0.092 4.092 7 C -0.072 4.072 8 C -0.016 4.016 9 C -0.213 4.213 10 C 0.544 3.456 11 O -0.529 6.529 12 N -0.696 5.696 13 C 0.202 3.798 14 C -0.103 4.103 15 C 0.102 3.898 16 F -0.135 7.135 17 C -0.154 4.154 18 C -0.091 4.091 19 C -0.130 4.130 20 C -0.056 4.056 21 C -0.126 4.126 22 C 0.082 3.918 23 H 0.076 0.924 24 O -0.551 6.551 25 C -0.184 4.184 26 C -0.096 4.096 27 C -0.118 4.118 28 H 0.380 0.620 29 H 0.115 0.885 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.130 0.870 33 H 0.131 0.869 34 H 0.137 0.863 35 H 0.131 0.869 36 H 0.409 0.591 37 H 0.136 0.864 38 H 0.132 0.868 39 H 0.128 0.872 40 H 0.123 0.877 41 H 0.087 0.913 42 H 0.112 0.888 43 H 0.384 0.616 44 H 0.116 0.884 45 H 0.078 0.922 46 H 0.132 0.868 47 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.288 3.607 2.089 4.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.182 4.182 3 Si 0.588 3.412 4 C -0.108 4.108 5 C -0.113 4.113 6 C -0.110 4.110 7 C -0.072 4.072 8 C -0.036 4.036 9 C -0.233 4.233 10 C 0.334 3.666 11 O -0.407 6.407 12 N -0.347 5.347 13 C 0.114 3.886 14 C -0.105 4.105 15 C 0.083 3.917 16 F -0.114 7.114 17 C -0.173 4.173 18 C -0.109 4.109 19 C -0.148 4.148 20 C -0.074 4.074 21 C -0.164 4.164 22 C 0.023 3.977 23 H 0.094 0.906 24 O -0.357 6.357 25 C -0.223 4.223 26 C -0.113 4.113 27 C -0.135 4.135 28 H 0.227 0.773 29 H 0.132 0.868 30 H -0.182 1.182 31 H -0.179 1.179 32 H 0.148 0.852 33 H 0.149 0.851 34 H 0.155 0.845 35 H 0.148 0.852 36 H 0.246 0.754 37 H 0.154 0.846 38 H 0.150 0.850 39 H 0.146 0.854 40 H 0.141 0.859 41 H 0.106 0.894 42 H 0.130 0.870 43 H 0.232 0.768 44 H 0.134 0.866 45 H 0.097 0.903 46 H 0.150 0.850 47 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.344 3.358 1.439 3.669 hybrid contribution 0.923 -0.563 -0.440 1.167 sum 0.579 2.795 0.999 3.024 Atomic orbital electron populations 1.86519 1.16916 1.81708 1.49246 1.25100 0.85380 1.10208 0.97480 0.94776 0.81102 0.77950 0.87355 1.20520 0.98681 0.95015 0.96619 1.20997 0.98820 0.93736 0.97721 1.21463 0.96278 1.00162 0.93140 1.19061 0.99703 0.93598 0.94844 1.22392 0.91004 0.99971 0.90218 1.22893 1.04079 1.00936 0.95407 1.18301 0.78072 0.87038 0.83203 1.90897 1.56860 1.14965 1.78004 1.45456 1.56569 1.13301 1.19363 1.19735 0.90343 0.93079 0.85407 1.19610 0.95334 0.98980 0.96576 1.17321 0.78516 0.99031 0.96874 1.91364 1.35086 1.94934 1.89986 1.21095 0.92774 1.01409 1.02030 1.21033 0.95517 0.97778 0.96596 1.21205 0.99776 0.97168 0.96628 1.20828 0.91185 0.98109 0.97303 1.23434 0.93577 1.00711 0.98648 1.22697 0.96789 0.89949 0.88252 0.90642 1.86377 1.50844 1.54867 1.43575 1.24493 0.94657 0.98841 1.04293 1.21367 0.98853 0.93666 0.97448 1.20934 0.98979 0.99381 0.94211 0.77314 0.86808 1.18192 1.17884 0.85220 0.85091 0.84491 0.85171 0.75449 0.84617 0.84986 0.85443 0.85875 0.89415 0.87022 0.76771 0.86573 0.90302 0.85007 0.85249 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.08 12.83 -35.23 -0.45 -0.37 16 2 C -0.07 0.05 2.80 36.00 0.10 0.15 16 3 Si 0.69 -1.02 29.78 -169.99 -5.06 -6.08 16 4 C -0.11 0.05 5.36 -104.50 -0.56 -0.51 16 5 C -0.09 0.00 9.66 -39.65 -0.38 -0.38 16 6 C -0.09 0.01 9.80 -39.11 -0.38 -0.37 16 7 C -0.07 0.01 5.87 -105.06 -0.62 -0.60 16 8 C -0.02 0.00 9.46 -37.16 -0.35 -0.35 16 9 C -0.21 0.08 9.41 -37.50 -0.35 -0.28 16 10 C 0.54 1.00 5.68 -12.96 -0.07 0.92 16 11 O -0.53 -2.79 13.62 5.20 0.07 -2.72 16 12 N -0.70 -0.21 4.36 -49.30 -0.21 -0.42 16 13 C 0.20 0.24 1.03 -132.16 -0.14 0.11 16 14 C -0.10 -0.27 4.57 -104.56 -0.48 -0.75 16 15 C 0.10 0.27 6.72 -39.42 -0.26 0.00 16 16 F -0.14 -0.31 12.93 2.25 0.03 -0.28 16 17 C -0.15 -0.25 10.03 -39.52 -0.40 -0.65 16 18 C -0.09 -0.09 10.04 -39.59 -0.40 -0.49 16 19 C -0.13 -0.21 10.04 -39.57 -0.40 -0.60 16 20 C -0.06 -0.15 7.48 -39.60 -0.30 -0.44 16 21 C -0.13 0.04 6.88 -25.92 -0.18 -0.14 16 22 C 0.08 -0.05 5.28 -25.78 -0.14 -0.18 16 23 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 24 O -0.55 0.46 12.96 -35.23 -0.46 0.01 16 25 C -0.18 -0.24 6.92 -25.78 -0.18 -0.42 16 26 C -0.10 0.11 9.41 -39.11 -0.37 -0.26 16 27 C -0.12 0.15 8.65 -39.65 -0.34 -0.19 16 28 H 0.38 -1.52 8.70 45.56 0.40 -1.13 16 29 H 0.11 -0.02 7.96 -51.93 -0.41 -0.44 16 30 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 31 H -0.25 -0.49 7.11 56.52 0.40 -0.08 16 32 H 0.13 -0.06 8.06 -52.49 -0.42 -0.49 16 33 H 0.13 -0.19 8.06 -52.49 -0.42 -0.62 16 34 H 0.14 0.11 7.52 -52.49 -0.39 -0.28 16 35 H 0.13 -0.37 6.07 -52.49 -0.32 -0.69 16 36 H 0.41 -0.63 8.45 -40.82 -0.34 -0.97 16 37 H 0.14 -0.02 8.06 -52.49 -0.42 -0.44 16 38 H 0.13 -0.17 8.06 -52.49 -0.42 -0.59 16 39 H 0.13 -0.03 8.06 -52.48 -0.42 -0.46 16 40 H 0.12 0.28 5.65 -52.48 -0.30 -0.02 16 41 H 0.09 -0.08 8.11 -51.93 -0.42 -0.50 16 42 H 0.11 -0.06 6.95 -51.93 -0.36 -0.42 16 43 H 0.38 -1.53 9.12 45.56 0.42 -1.11 16 44 H 0.12 0.21 5.20 -51.93 -0.27 -0.06 16 45 H 0.08 0.21 8.14 -51.93 -0.42 -0.21 16 46 H 0.13 -0.42 6.17 -52.49 -0.32 -0.75 16 47 H 0.13 -0.42 4.88 -52.48 -0.26 -0.68 16 LS Contribution 387.14 15.07 5.83 5.83 Total: 0.00 -8.60 387.14 -11.19 -19.79 By element: Atomic # 1 Polarization: -5.56 SS G_CDS: -4.75 Total: -10.31 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: -6.19 Total: -5.44 kcal Atomic # 7 Polarization: -0.21 SS G_CDS: -0.21 Total: -0.42 kcal Atomic # 8 Polarization: -2.24 SS G_CDS: -0.84 Total: -3.08 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.03 Total: -0.28 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.06 Total: -6.08 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -8.60 -11.19 -19.79 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_12360594.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.799 kcal (2) G-P(sol) polarization free energy of solvation -8.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.397 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.189 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.787 kcal (6) G-S(sol) free energy of system = (1) + (5) -37.586 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds