Wall clock time and date at job start Tue Mar 9 2021 13:37:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.46954 * 2 1 4 4 C 1.50696 * 109.47763 * 119.99943 * 2 1 3 5 5 C 1.38401 * 119.82204 * 64.99977 * 4 2 1 6 6 C 1.37895 * 120.17104 * 180.02562 * 5 4 2 7 7 C 1.39840 * 119.82478 * 0.02562 * 6 5 4 8 8 C 1.47207 * 120.17135 * 179.97438 * 7 6 5 9 9 C 1.34808 * 120.00030 * 180.27726 * 8 7 6 10 10 C 1.46425 * 119.99920 * 179.72181 * 9 8 7 11 11 O 1.21693 * 120.00132 * 359.97438 * 10 9 8 12 12 N 1.34777 * 119.99668 * 179.97438 * 10 9 8 13 13 C 1.46505 * 119.99724 * 179.97438 * 12 10 9 14 14 C 1.50703 * 112.84713 * 309.66620 * 13 12 10 15 15 C 1.38442 * 120.00957 * 170.05540 * 14 13 12 16 16 F 1.35104 * 120.02571 * 0.02562 * 15 14 13 17 17 C 1.38479 * 119.94710 * 179.76941 * 15 14 13 18 18 C 1.38174 * 119.97724 * 0.49150 * 17 15 14 19 19 C 1.38274 * 120.01886 * 359.78490 * 18 17 15 20 20 C 1.38209 * 120.01663 * 350.33769 * 14 13 12 21 21 C 1.53780 * 113.61356 * 178.47273 * 13 12 10 22 22 C 1.53773 * 87.07981 * 270.88260 * 21 13 12 23 23 H 1.09000 * 113.61627 * 219.93347 * 22 21 13 24 24 O 1.42898 * 113.61345 * 89.11984 * 22 21 13 25 25 C 1.53776 * 113.61295 * 80.86436 * 13 12 10 26 26 C 1.39838 * 119.66008 * 0.25314 * 7 6 5 27 27 C 1.37891 * 119.82419 * 359.51134 * 26 7 6 28 28 H 0.96696 * 114.00073 * 299.99351 * 1 2 3 29 29 H 1.09005 * 109.47028 * 240.00435 * 2 1 3 30 30 H 1.48502 * 110.00141 * 178.68185 * 3 2 1 31 31 H 1.48507 * 110.00224 * 300.00356 * 3 2 1 32 32 H 1.07996 * 119.92056 * 0.02562 * 5 4 2 33 33 H 1.07999 * 120.08848 * 179.97438 * 6 5 4 34 34 H 1.08002 * 119.99660 * 359.97438 * 8 7 6 35 35 H 1.08001 * 119.99718 * 359.71499 * 9 8 7 36 36 H 0.97000 * 120.00483 * 0.02562 * 12 10 9 37 37 H 1.08001 * 120.01167 * 180.24599 * 17 15 14 38 38 H 1.07996 * 119.99169 * 179.76370 * 18 17 15 39 39 H 1.08005 * 119.96913 * 179.97438 * 19 18 17 40 40 H 1.08007 * 119.98788 * 359.97438 * 20 14 13 41 41 H 1.08998 * 113.61426 * 25.43420 * 21 13 12 42 42 H 1.08995 * 113.61426 * 156.33366 * 21 13 12 43 43 H 0.96704 * 114.00234 * 180.02562 * 24 22 21 44 44 H 1.09007 * 113.61208 * 203.66362 * 25 13 12 45 45 H 1.08999 * 113.61822 * 334.56854 * 25 13 12 46 46 H 1.07992 * 120.08794 * 179.75001 * 26 7 6 47 47 H 1.08006 * 119.91926 * 180.22743 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9315 -0.7103 1.2304 5 6 1.6825 -2.0618 1.3948 6 6 2.1385 -2.7189 2.5181 7 6 2.8536 -2.0159 3.4928 8 6 3.3435 -2.7096 4.6952 9 6 4.0277 -2.0274 5.6353 10 6 4.5096 -2.7161 6.8342 11 8 4.2922 -3.9043 6.9822 12 7 5.1941 -2.0341 7.7738 13 6 5.6758 -2.7231 8.9736 14 6 4.6004 -3.5265 9.6586 15 6 4.9327 -4.3978 10.6818 16 9 6.2211 -4.5281 11.0671 17 6 3.9429 -5.1318 11.3135 18 6 2.6262 -5.0015 10.9153 19 6 2.2963 -4.1351 9.8893 20 6 3.2828 -3.3980 9.2616 21 6 6.4692 -1.8155 9.9284 22 6 7.7250 -2.2094 9.1332 23 1 8.6029 -2.3754 9.7575 24 8 7.9897 -1.3532 8.0201 25 6 6.9820 -3.5041 8.7528 26 6 3.0960 -0.6493 3.3221 27 6 2.6377 -0.0075 2.1910 28 1 -0.3933 0.4416 0.7651 29 1 1.7923 -0.5138 -0.8901 30 1 3.5345 1.7704 0.0321 31 1 1.5613 2.4680 -1.2085 32 1 1.1298 -2.6033 0.6414 33 1 1.9432 -3.7734 2.6452 34 1 3.1505 -3.7641 4.8265 35 1 4.2204 -0.9728 5.5040 36 1 5.3672 -1.0870 7.6560 37 1 4.2004 -5.8089 12.1145 38 1 1.8545 -5.5766 11.4052 39 1 1.2669 -4.0341 9.5784 40 1 3.0238 -2.7214 8.4606 41 1 6.2112 -0.7599 9.8426 42 1 6.4772 -2.1677 10.9598 43 1 8.7782 -1.5961 7.5157 44 1 7.1299 -4.3173 9.4635 45 1 7.1378 -3.8109 7.7186 46 1 3.6440 -0.0988 4.0724 47 1 2.8272 1.0472 2.0559 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_12360594.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:04 Heat of formation + Delta-G solvation = -36.437915 kcal Electronic energy + Delta-G solvation = -32899.830303 eV Core-core repulsion = 28316.790936 eV Total energy + Delta-G solvation = -4583.039367 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.141 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -50.12614 -42.05741 -40.65346 -39.67407 -39.39047 -37.76879 -36.26158 -35.05612 -33.94251 -32.22911 -32.02892 -31.33030 -31.14950 -27.37598 -27.02741 -25.91429 -24.32493 -23.93794 -23.56885 -22.73831 -21.97607 -20.65488 -20.44583 -18.97177 -18.66372 -18.22596 -18.02049 -17.65905 -17.16620 -17.01079 -16.79784 -16.60160 -16.47580 -16.21141 -16.01442 -15.75694 -15.47076 -15.21571 -15.10905 -14.82872 -14.64846 -14.53602 -14.32513 -14.18082 -13.81632 -13.80543 -13.63453 -13.45694 -13.27339 -13.03414 -12.96262 -12.50020 -12.35204 -12.25767 -12.06441 -11.92417 -11.72914 -11.62224 -11.34180 -11.08656 -10.81064 -10.43939 -10.18569 -9.99170 -9.82523 -9.59125 -9.24986 -5.00640 -0.55765 0.13700 0.25411 0.38633 0.88776 1.30385 1.63801 1.96961 2.02419 2.21680 2.57477 2.80839 3.03269 3.23286 3.37011 3.44483 3.48241 3.55350 3.64357 3.69400 3.75661 3.79495 3.87234 3.94598 4.04854 4.18695 4.20898 4.29403 4.34464 4.35669 4.41459 4.42978 4.52418 4.61209 4.70288 4.82825 4.83869 4.86349 4.88920 4.91425 4.96858 5.03320 5.08377 5.10571 5.15629 5.32174 5.37796 5.44882 5.47361 5.57589 5.60032 5.89305 5.90494 6.53282 6.75578 6.80042 7.22414 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.079 4.079 3 Si 0.779 3.221 4 C -0.112 4.112 5 C -0.108 4.108 6 C -0.103 4.103 7 C -0.080 4.080 8 C -0.018 4.018 9 C -0.208 4.208 10 C 0.541 3.459 11 O -0.570 6.570 12 N -0.684 5.684 13 C 0.195 3.805 14 C -0.115 4.115 15 C 0.084 3.916 16 F -0.137 7.137 17 C -0.162 4.162 18 C -0.094 4.094 19 C -0.138 4.138 20 C -0.071 4.071 21 C -0.121 4.121 22 C 0.093 3.907 23 H 0.089 0.911 24 O -0.558 6.558 25 C -0.188 4.188 26 C -0.095 4.095 27 C -0.120 4.120 28 H 0.396 0.604 29 H 0.105 0.895 30 H -0.284 1.284 31 H -0.303 1.303 32 H 0.128 0.872 33 H 0.135 0.865 34 H 0.123 0.877 35 H 0.160 0.840 36 H 0.419 0.581 37 H 0.151 0.849 38 H 0.156 0.844 39 H 0.143 0.857 40 H 0.122 0.878 41 H 0.097 0.903 42 H 0.112 0.888 43 H 0.398 0.602 44 H 0.108 0.892 45 H 0.060 0.940 46 H 0.156 0.844 47 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.113 5.003 2.813 5.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.188 4.188 3 Si 0.685 3.315 4 C -0.113 4.113 5 C -0.126 4.126 6 C -0.121 4.121 7 C -0.080 4.080 8 C -0.038 4.038 9 C -0.228 4.228 10 C 0.332 3.668 11 O -0.451 6.451 12 N -0.335 5.335 13 C 0.107 3.893 14 C -0.116 4.116 15 C 0.065 3.935 16 F -0.116 7.116 17 C -0.181 4.181 18 C -0.112 4.112 19 C -0.156 4.156 20 C -0.089 4.089 21 C -0.158 4.158 22 C 0.034 3.966 23 H 0.106 0.894 24 O -0.366 6.366 25 C -0.227 4.227 26 C -0.112 4.112 27 C -0.137 4.137 28 H 0.246 0.754 29 H 0.122 0.878 30 H -0.211 1.211 31 H -0.231 1.231 32 H 0.146 0.854 33 H 0.153 0.847 34 H 0.140 0.860 35 H 0.177 0.823 36 H 0.258 0.742 37 H 0.169 0.831 38 H 0.174 0.826 39 H 0.161 0.839 40 H 0.140 0.860 41 H 0.115 0.885 42 H 0.131 0.869 43 H 0.248 0.752 44 H 0.126 0.874 45 H 0.079 0.921 46 H 0.174 0.826 47 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -0.164 4.764 2.189 5.245 hybrid contribution 0.847 -1.034 -0.723 1.519 sum 0.683 3.730 1.466 4.065 Atomic orbital electron populations 1.86479 1.17180 1.82213 1.50512 1.25253 0.85357 1.11061 0.97152 0.93740 0.77852 0.75017 0.84859 1.20609 0.98866 0.94904 0.96908 1.21079 0.99380 0.94256 0.97909 1.21598 0.96521 1.00628 0.93313 1.19107 1.00047 0.94254 0.94599 1.22326 0.91292 0.99478 0.90688 1.22972 1.03624 1.02064 0.94138 1.18660 0.77706 0.86638 0.83803 1.90877 1.58503 1.16787 1.78924 1.45371 1.55725 1.13656 1.18754 1.19846 0.89979 0.93545 0.85948 1.19820 0.95812 0.99285 0.96726 1.17535 0.78758 0.99740 0.97501 1.91352 1.35187 1.95005 1.90036 1.21386 0.92949 1.01403 1.02323 1.21340 0.95888 0.97616 0.96354 1.21490 1.00447 0.96991 0.96667 1.20944 0.91590 0.98744 0.97633 1.23414 0.93194 1.00853 0.98377 1.22614 0.97050 0.88609 0.88337 0.89355 1.86339 1.51901 1.54682 1.43663 1.24472 0.95674 0.99643 1.02871 1.21659 0.98421 0.93232 0.97932 1.21173 0.98360 1.00379 0.93793 0.75429 0.87770 1.21064 1.23097 0.85423 0.84670 0.85955 0.82257 0.74241 0.83137 0.82628 0.83913 0.86048 0.88474 0.86947 0.75182 0.87411 0.92132 0.82605 0.83140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.17 12.83 -148.98 -1.91 -1.74 16 2 C -0.08 0.10 2.80 71.23 0.20 0.30 16 3 Si 0.78 -2.65 29.78 68.60 2.04 -0.61 16 4 C -0.11 0.12 5.36 -19.79 -0.11 0.02 16 5 C -0.11 -0.07 9.66 22.23 0.21 0.14 16 6 C -0.10 -0.04 9.80 22.58 0.22 0.18 16 7 C -0.08 0.03 5.87 -20.15 -0.12 -0.08 16 8 C -0.02 -0.01 9.46 23.84 0.23 0.21 16 9 C -0.21 0.21 9.41 23.62 0.22 0.44 16 10 C 0.54 2.33 5.68 86.37 0.49 2.82 16 11 O -0.57 -6.99 13.62 -4.33 -0.06 -7.05 16 12 N -0.68 -0.50 4.36 -428.10 -1.87 -2.37 16 13 C 0.19 0.59 1.03 3.38 0.00 0.59 16 14 C -0.11 -0.73 4.57 -19.82 -0.09 -0.82 16 15 C 0.08 0.53 6.72 22.38 0.15 0.68 16 16 F -0.14 -0.78 12.93 44.97 0.58 -0.20 16 17 C -0.16 -0.59 10.03 22.31 0.22 -0.37 16 18 C -0.09 -0.19 10.04 22.26 0.22 0.04 16 19 C -0.14 -0.50 10.04 22.27 0.22 -0.27 16 20 C -0.07 -0.44 7.48 22.26 0.17 -0.27 16 21 C -0.12 0.10 6.88 31.12 0.21 0.32 16 22 C 0.09 -0.13 5.28 31.21 0.16 0.03 16 23 H 0.09 -0.34 8.14 -2.39 -0.02 -0.36 16 24 O -0.56 1.45 12.96 -148.98 -1.93 -0.48 16 25 C -0.19 -0.67 6.92 31.21 0.22 -0.46 16 26 C -0.09 0.35 9.41 22.57 0.21 0.56 16 27 C -0.12 0.46 8.65 22.23 0.19 0.65 16 28 H 0.40 -3.38 8.70 -74.06 -0.64 -4.02 16 29 H 0.10 0.03 7.96 -2.38 -0.02 0.01 16 30 H -0.28 -0.31 7.11 99.48 0.71 0.40 16 31 H -0.30 -1.43 7.11 99.48 0.71 -0.72 16 32 H 0.13 0.04 8.06 -2.91 -0.02 0.01 16 33 H 0.14 -0.21 8.06 -2.91 -0.02 -0.23 16 34 H 0.12 0.43 7.52 -2.91 -0.02 0.41 16 35 H 0.16 -1.22 6.07 -2.91 -0.02 -1.24 16 36 H 0.42 -1.61 8.45 -92.71 -0.78 -2.39 16 37 H 0.15 -0.05 8.06 -2.91 -0.02 -0.07 16 38 H 0.16 -0.55 8.06 -2.91 -0.02 -0.57 16 39 H 0.14 -0.06 8.06 -2.91 -0.02 -0.09 16 40 H 0.12 0.68 5.65 -2.91 -0.02 0.66 16 41 H 0.10 -0.27 8.11 -2.39 -0.02 -0.29 16 42 H 0.11 -0.11 6.95 -2.39 -0.02 -0.13 16 43 H 0.40 -3.52 9.12 -74.05 -0.68 -4.19 16 44 H 0.11 0.55 5.20 -2.38 -0.01 0.53 16 45 H 0.06 0.42 8.14 -2.39 -0.02 0.40 16 46 H 0.16 -1.42 6.17 -2.91 -0.02 -1.44 16 47 H 0.15 -1.30 4.88 -2.91 -0.01 -1.31 16 Total: 0.00 -21.48 387.14 -0.89 -22.37 By element: Atomic # 1 Polarization: -13.62 SS G_CDS: -1.00 Total: -14.62 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: 3.25 Total: 4.70 kcal Atomic # 7 Polarization: -0.50 SS G_CDS: -1.87 Total: -2.37 kcal Atomic # 8 Polarization: -5.38 SS G_CDS: -3.90 Total: -9.28 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 0.58 Total: -0.20 kcal Atomic # 14 Polarization: -2.65 SS G_CDS: 2.04 Total: -0.61 kcal Total: -21.48 -0.89 -22.37 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_12360594.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.071 kcal (2) G-P(sol) polarization free energy of solvation -21.475 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.546 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.892 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.367 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.438 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds