Wall clock time and date at job start Tue Mar 9 2021 13:37:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46881 * 2 1 4 4 C 1.50695 * 109.47447 * 120.00116 * 2 1 3 5 5 C 1.38186 * 119.84846 * 255.02404 * 4 2 1 6 6 C 1.38306 * 120.14892 * 179.97438 * 5 4 2 7 7 F 1.35095 * 120.08282 * 180.02562 * 6 5 4 8 8 C 1.39808 * 119.83361 * 359.97438 * 6 5 4 9 9 C 1.47690 * 120.15956 * 180.27961 * 8 6 5 10 10 O 1.21579 * 119.99669 * 359.71982 * 9 8 6 11 11 N 1.34775 * 120.00460 * 179.72479 * 9 8 6 12 12 C 1.46499 * 120.00277 * 180.02562 * 11 9 8 13 13 C 1.50710 * 112.84785 * 311.19246 * 12 11 9 14 14 C 1.38433 * 120.01108 * 170.33193 * 13 12 11 15 15 F 1.35096 * 120.02782 * 0.02612 * 14 13 12 16 16 C 1.38483 * 119.94743 * 180.02562 * 14 13 12 17 17 C 1.38179 * 119.97246 * 0.02562 * 16 14 13 18 18 C 1.38272 * 120.02510 * 0.02562 * 17 16 14 19 19 C 1.38215 * 120.05003 * 359.72011 * 18 17 16 20 20 C 1.53777 * 113.61741 * 179.97438 * 12 11 9 21 21 C 1.53781 * 87.07962 * 270.88505 * 20 12 11 22 22 H 1.08998 * 113.60922 * 219.93578 * 21 20 12 23 23 O 1.42898 * 113.61943 * 89.11405 * 21 20 12 24 24 C 1.53779 * 113.61640 * 82.49768 * 12 11 9 25 25 C 1.39665 * 119.68576 * 0.02562 * 8 6 5 26 26 C 1.38061 * 119.85254 * 0.02562 * 25 8 6 27 27 F 1.35107 * 119.91718 * 180.02562 * 26 25 8 28 28 H 0.96699 * 114.00054 * 59.99421 * 1 2 3 29 29 H 1.09003 * 109.46906 * 240.00906 * 2 1 3 30 30 H 1.48491 * 110.00355 * 298.68702 * 3 2 1 31 31 H 1.48499 * 109.99636 * 60.00673 * 3 2 1 32 32 H 1.08000 * 119.91811 * 359.95494 * 5 4 2 33 33 H 0.96997 * 119.99465 * 359.97438 * 11 9 8 34 34 H 1.07993 * 120.01342 * 179.97438 * 16 14 13 35 35 H 1.08004 * 119.98356 * 179.97438 * 17 16 14 36 36 H 1.07997 * 119.96986 * 179.97438 * 18 17 16 37 37 H 1.08000 * 119.98591 * 180.27926 * 19 18 17 38 38 H 1.09002 * 113.61145 * 25.42709 * 20 12 11 39 39 H 1.08996 * 113.61878 * 156.24733 * 20 12 11 40 40 H 0.96694 * 114.00358 * 179.97438 * 23 21 20 41 41 H 1.08997 * 113.61501 * 203.66903 * 24 12 11 42 42 H 1.09001 * 113.61114 * 334.57087 * 24 12 11 43 43 H 1.08002 * 120.06643 * 179.97438 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4527 0.0197 2.2814 6 6 2.9151 -0.6258 3.4138 7 9 3.4239 0.0893 4.4408 8 6 2.8535 -2.0203 3.4935 9 6 3.3395 -2.7167 4.7018 10 8 3.7992 -2.0775 5.6282 11 7 3.2735 -4.0607 4.7776 12 6 3.7551 -4.7513 5.9764 13 6 5.1257 -4.2936 6.4047 14 6 5.6405 -4.6969 7.6248 15 9 4.9151 -5.5014 8.4320 16 6 6.8998 -4.2750 8.0172 17 6 7.6406 -3.4518 7.1910 18 6 7.1249 -3.0487 5.9730 19 6 5.8703 -3.4734 5.5780 20 6 3.6100 -6.2806 5.9065 21 6 2.2080 -6.0965 6.5109 22 1 1.9495 -6.8525 7.2522 23 8 1.1837 -5.9049 5.5331 24 6 2.7293 -4.7856 7.1215 25 6 2.3253 -2.7514 2.4271 26 6 1.8684 -2.0937 1.3025 27 9 1.3567 -2.7996 0.2704 28 1 -0.3933 0.4418 -0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5877 2.4587 -1.2241 31 1 1.5615 2.4678 1.2086 32 1 2.4994 1.0969 2.2182 33 1 2.9065 -4.5706 4.0385 34 1 7.3023 -4.5887 8.9690 35 1 8.6226 -3.1223 7.4970 36 1 7.7045 -2.4050 5.3281 37 1 5.4703 -3.1617 4.6245 38 1 3.5989 -6.6721 4.8892 39 1 4.3012 -6.8151 6.5581 40 1 0.2996 -5.7889 5.9071 41 1 3.1786 -4.9111 8.1066 42 1 2.0072 -3.9700 7.0854 43 1 2.2751 -3.8288 2.4819 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_12360598.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:08 Heat of formation + Delta-G solvation = -129.574231 kcal Electronic energy + Delta-G solvation = -36112.152262 eV Core-core repulsion = 30869.930010 eV Total energy + Delta-G solvation = -5242.222253 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.107 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -50.05719 -49.99811 -49.94098 -42.18838 -40.57962 -39.40805 -39.28848 -37.80095 -36.31228 -34.44691 -33.04552 -31.89321 -31.37319 -31.25012 -28.00862 -27.03379 -25.91802 -24.41220 -23.99994 -23.47413 -22.70502 -21.82977 -20.65313 -19.65865 -18.82923 -18.75303 -18.58674 -18.34445 -18.16771 -17.50181 -17.40503 -17.05976 -16.87063 -16.72831 -16.52645 -16.42102 -16.22240 -15.88615 -15.64581 -15.57655 -15.52176 -15.30024 -15.06278 -14.68069 -14.42049 -14.21371 -14.00019 -13.79024 -13.73612 -13.70989 -13.53772 -13.45567 -13.04941 -12.88722 -12.46978 -12.38239 -12.33177 -12.00148 -11.87040 -11.67738 -11.08757 -10.85910 -10.73517 -10.57996 -10.20003 -9.79508 -9.69278 -9.49327 -5.14099 -0.78832 -0.29620 0.23503 0.35767 1.01316 1.39914 1.45415 1.75744 1.78562 2.26768 2.65529 2.73944 2.84226 2.92162 3.02424 3.27378 3.30546 3.35170 3.38011 3.47283 3.53249 3.66904 3.71708 3.72750 3.91084 4.04004 4.08184 4.23798 4.24814 4.35406 4.38705 4.45747 4.55271 4.60175 4.60983 4.68151 4.73887 4.79109 4.88274 4.91068 4.97646 5.12604 5.14386 5.37132 5.39686 5.51359 5.57402 5.97972 6.22331 6.32734 6.55329 7.06498 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.082 4.082 3 Si 0.692 3.308 4 C -0.051 4.051 5 C -0.135 4.135 6 C 0.160 3.840 7 F -0.104 7.104 8 C -0.141 4.141 9 C 0.556 3.444 10 O -0.499 6.499 11 N -0.693 5.693 12 C 0.202 3.798 13 C -0.105 4.105 14 C 0.103 3.897 15 F -0.135 7.135 16 C -0.154 4.154 17 C -0.090 4.090 18 C -0.128 4.128 19 C -0.055 4.055 20 C -0.126 4.126 21 C 0.082 3.918 22 H 0.077 0.923 23 O -0.552 6.552 24 C -0.184 4.184 25 C -0.092 4.092 26 C 0.111 3.889 27 F -0.122 7.122 28 H 0.386 0.614 29 H 0.086 0.914 30 H -0.253 1.253 31 H -0.249 1.249 32 H 0.158 0.842 33 H 0.408 0.592 34 H 0.136 0.864 35 H 0.133 0.867 36 H 0.128 0.872 37 H 0.122 0.878 38 H 0.088 0.912 39 H 0.114 0.886 40 H 0.385 0.615 41 H 0.118 0.882 42 H 0.079 0.921 43 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.795 -1.382 -3.460 4.135 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.338 6.338 2 C -0.191 4.191 3 Si 0.592 3.408 4 C -0.053 4.053 5 C -0.153 4.153 6 C 0.139 3.861 7 F -0.082 7.082 8 C -0.145 4.145 9 C 0.342 3.658 10 O -0.374 6.374 11 N -0.346 5.346 12 C 0.115 3.885 13 C -0.107 4.107 14 C 0.084 3.916 15 F -0.114 7.114 16 C -0.173 4.173 17 C -0.108 4.108 18 C -0.146 4.146 19 C -0.073 4.073 20 C -0.163 4.163 21 C 0.023 3.977 22 H 0.095 0.905 23 O -0.358 6.358 24 C -0.223 4.223 25 C -0.111 4.111 26 C 0.091 3.909 27 F -0.100 7.100 28 H 0.235 0.765 29 H 0.104 0.896 30 H -0.177 1.177 31 H -0.174 1.174 32 H 0.175 0.825 33 H 0.246 0.754 34 H 0.154 0.846 35 H 0.151 0.849 36 H 0.146 0.854 37 H 0.139 0.861 38 H 0.106 0.894 39 H 0.132 0.868 40 H 0.234 0.766 41 H 0.136 0.864 42 H 0.098 0.902 43 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 2.470 -0.489 -2.616 3.631 hybrid contribution -1.987 -0.418 -0.412 2.072 sum 0.483 -0.908 -3.029 3.198 Atomic orbital electron populations 1.86589 1.16760 1.80400 1.50077 1.24782 0.85429 1.11715 0.97155 0.94859 0.91318 0.73674 0.80980 1.19299 0.98415 0.91810 0.95741 1.20989 1.00930 1.01687 0.91688 1.17429 0.95393 0.87886 0.85375 1.91654 1.83379 1.77121 1.56020 1.19854 1.05890 0.92471 0.96335 1.17788 0.79229 0.82295 0.86459 1.90957 1.43124 1.65633 1.37703 1.45425 1.63790 1.05904 1.19446 1.19780 0.89945 0.92358 0.86429 1.19551 0.95734 1.01116 0.94291 1.17291 0.91012 0.94425 0.88884 1.91367 1.76500 1.71009 1.72478 1.21096 0.93522 1.00936 1.01705 1.21042 0.99812 0.96199 0.93728 1.21197 0.95825 1.00522 0.97069 1.20819 0.93226 0.94232 0.99062 1.23454 0.95884 0.93251 1.03723 1.22640 0.88262 0.96216 0.90573 0.90482 1.86362 1.19361 1.95148 1.34935 1.24449 0.98872 0.99244 0.99714 1.21187 0.97530 1.01205 0.91195 1.17203 0.98941 0.88780 0.85982 1.91569 1.84327 1.78059 1.56073 0.76526 0.89572 1.17725 1.17351 0.82495 0.75398 0.84580 0.84941 0.85369 0.86050 0.89364 0.86795 0.76635 0.86400 0.90203 0.82956 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.15 12.86 -35.23 -0.45 -0.61 16 2 C -0.08 0.09 2.43 36.00 0.09 0.18 16 3 Si 0.69 -1.52 30.19 -169.99 -5.13 -6.65 16 4 C -0.05 -0.01 5.30 -104.49 -0.55 -0.56 16 5 C -0.13 -0.02 8.62 -39.58 -0.34 -0.36 16 6 C 0.16 0.29 7.28 -38.97 -0.28 0.00 16 7 F -0.10 -0.41 15.55 2.25 0.04 -0.38 16 8 C -0.14 -0.16 5.88 -104.92 -0.62 -0.77 16 9 C 0.56 1.33 5.70 -12.40 -0.07 1.26 16 10 O -0.50 -2.83 12.53 5.30 0.07 -2.77 16 11 N -0.69 -0.26 4.37 -48.90 -0.21 -0.47 16 12 C 0.20 0.21 1.07 -132.16 -0.14 0.07 16 13 C -0.11 -0.26 4.56 -104.55 -0.48 -0.74 16 14 C 0.10 0.25 6.71 -39.42 -0.26 -0.02 16 15 F -0.13 -0.28 12.93 2.25 0.03 -0.25 16 16 C -0.15 -0.22 10.03 -39.51 -0.40 -0.62 16 17 C -0.09 -0.08 10.04 -39.59 -0.40 -0.48 16 18 C -0.13 -0.20 10.04 -39.58 -0.40 -0.59 16 19 C -0.06 -0.14 7.38 -39.60 -0.29 -0.43 16 20 C -0.13 0.08 6.87 -25.92 -0.18 -0.10 16 21 C 0.08 -0.07 5.28 -25.95 -0.14 -0.20 16 22 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 23 O -0.55 0.56 12.91 -35.23 -0.45 0.11 16 24 C -0.18 -0.19 6.91 -25.95 -0.18 -0.37 16 25 C -0.09 0.05 9.52 -39.11 -0.37 -0.32 16 26 C 0.11 0.05 7.23 -39.49 -0.29 -0.23 16 27 F -0.12 -0.18 16.73 2.25 0.04 -0.14 16 28 H 0.39 -1.46 8.74 45.56 0.40 -1.06 16 29 H 0.09 -0.22 7.89 -51.93 -0.41 -0.63 16 30 H -0.25 0.08 7.11 56.52 0.40 0.48 16 31 H -0.25 -0.14 6.74 56.52 0.38 0.24 16 32 H 0.16 -0.19 4.87 -52.49 -0.26 -0.45 16 33 H 0.41 -0.61 6.45 -40.82 -0.26 -0.87 16 34 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 35 H 0.13 -0.19 8.06 -52.48 -0.42 -0.61 16 36 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 37 H 0.12 0.27 5.57 -52.49 -0.29 -0.02 16 38 H 0.09 -0.11 8.12 -51.93 -0.42 -0.53 16 39 H 0.11 -0.10 6.93 -51.93 -0.36 -0.46 16 40 H 0.39 -1.56 9.12 45.56 0.42 -1.14 16 41 H 0.12 0.17 5.23 -51.93 -0.27 -0.10 16 42 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 43 H 0.15 -0.44 6.40 -52.49 -0.34 -0.78 16 LS Contribution 362.55 15.07 5.46 5.46 Total: 0.00 -8.59 362.55 -9.05 -17.64 By element: Atomic # 1 Polarization: -4.52 SS G_CDS: -3.13 Total: -7.65 kcal Atomic # 6 Polarization: 1.00 SS G_CDS: -5.30 Total: -4.30 kcal Atomic # 7 Polarization: -0.26 SS G_CDS: -0.21 Total: -0.47 kcal Atomic # 8 Polarization: -2.43 SS G_CDS: -0.84 Total: -3.27 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.10 Total: -0.76 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.13 Total: -6.65 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -8.59 -9.05 -17.64 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_12360598.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.938 kcal (2) G-P(sol) polarization free energy of solvation -8.590 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -120.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.047 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.636 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.574 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds