Wall clock time and date at job start Tue Mar 9 2021 13:37:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86302 * 109.46881 * 2 1 4 4 C 1.50695 * 109.47447 * 120.00116 * 2 1 3 5 5 C 1.38186 * 119.84846 * 255.02404 * 4 2 1 6 6 C 1.38306 * 120.14892 * 179.97438 * 5 4 2 7 7 F 1.35095 * 120.08282 * 180.02562 * 6 5 4 8 8 C 1.39808 * 119.83361 * 359.97438 * 6 5 4 9 9 C 1.47690 * 120.15956 * 180.27961 * 8 6 5 10 10 O 1.21579 * 119.99669 * 359.71982 * 9 8 6 11 11 N 1.34775 * 120.00460 * 179.72479 * 9 8 6 12 12 C 1.46499 * 120.00277 * 180.02562 * 11 9 8 13 13 C 1.50710 * 112.84785 * 311.19246 * 12 11 9 14 14 C 1.38433 * 120.01108 * 170.33193 * 13 12 11 15 15 F 1.35096 * 120.02782 * 0.02612 * 14 13 12 16 16 C 1.38483 * 119.94743 * 180.02562 * 14 13 12 17 17 C 1.38179 * 119.97246 * 0.02562 * 16 14 13 18 18 C 1.38272 * 120.02510 * 0.02562 * 17 16 14 19 19 C 1.38215 * 120.05003 * 359.72011 * 18 17 16 20 20 C 1.53777 * 113.61741 * 179.97438 * 12 11 9 21 21 C 1.53781 * 87.07962 * 270.88505 * 20 12 11 22 22 H 1.08998 * 113.60922 * 219.93578 * 21 20 12 23 23 O 1.42898 * 113.61943 * 89.11405 * 21 20 12 24 24 C 1.53779 * 113.61640 * 82.49768 * 12 11 9 25 25 C 1.39665 * 119.68576 * 0.02562 * 8 6 5 26 26 C 1.38061 * 119.85254 * 0.02562 * 25 8 6 27 27 F 1.35107 * 119.91718 * 180.02562 * 26 25 8 28 28 H 0.96699 * 114.00054 * 59.99421 * 1 2 3 29 29 H 1.09003 * 109.46906 * 240.00906 * 2 1 3 30 30 H 1.48491 * 110.00355 * 298.68702 * 3 2 1 31 31 H 1.48499 * 109.99636 * 60.00673 * 3 2 1 32 32 H 1.08000 * 119.91811 * 359.95494 * 5 4 2 33 33 H 0.96997 * 119.99465 * 359.97438 * 11 9 8 34 34 H 1.07993 * 120.01342 * 179.97438 * 16 14 13 35 35 H 1.08004 * 119.98356 * 179.97438 * 17 16 14 36 36 H 1.07997 * 119.96986 * 179.97438 * 18 17 16 37 37 H 1.08000 * 119.98591 * 180.27926 * 19 18 17 38 38 H 1.09002 * 113.61145 * 25.42709 * 20 12 11 39 39 H 1.08996 * 113.61878 * 156.24733 * 20 12 11 40 40 H 0.96694 * 114.00358 * 179.97438 * 23 21 20 41 41 H 1.08997 * 113.61501 * 203.66903 * 24 12 11 42 42 H 1.09001 * 113.61114 * 334.57087 * 24 12 11 43 43 H 1.08002 * 120.06643 * 179.97438 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4527 0.0197 2.2814 6 6 2.9151 -0.6258 3.4138 7 9 3.4239 0.0893 4.4408 8 6 2.8535 -2.0203 3.4935 9 6 3.3395 -2.7167 4.7018 10 8 3.7992 -2.0775 5.6282 11 7 3.2735 -4.0607 4.7776 12 6 3.7551 -4.7513 5.9764 13 6 5.1257 -4.2936 6.4047 14 6 5.6405 -4.6969 7.6248 15 9 4.9151 -5.5014 8.4320 16 6 6.8998 -4.2750 8.0172 17 6 7.6406 -3.4518 7.1910 18 6 7.1249 -3.0487 5.9730 19 6 5.8703 -3.4734 5.5780 20 6 3.6100 -6.2806 5.9065 21 6 2.2080 -6.0965 6.5109 22 1 1.9495 -6.8525 7.2522 23 8 1.1837 -5.9049 5.5331 24 6 2.7293 -4.7856 7.1215 25 6 2.3253 -2.7514 2.4271 26 6 1.8684 -2.0937 1.3025 27 9 1.3567 -2.7996 0.2704 28 1 -0.3933 0.4418 -0.7650 29 1 1.7923 -0.5137 -0.8901 30 1 1.5877 2.4587 -1.2241 31 1 1.5615 2.4678 1.2086 32 1 2.4994 1.0969 2.2182 33 1 2.9065 -4.5706 4.0385 34 1 7.3023 -4.5887 8.9690 35 1 8.6226 -3.1223 7.4970 36 1 7.7045 -2.4050 5.3281 37 1 5.4703 -3.1617 4.6245 38 1 3.5989 -6.6721 4.8892 39 1 4.3012 -6.8151 6.5581 40 1 0.2996 -5.7889 5.9071 41 1 3.1786 -4.9111 8.1066 42 1 2.0072 -3.9700 7.0854 43 1 2.2751 -3.8288 2.4819 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_12360598.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:07 Heat of formation + Delta-G solvation = -129.330574 kcal Electronic energy + Delta-G solvation = -36112.141696 eV Core-core repulsion = 30869.930010 eV Total energy + Delta-G solvation = -5242.211687 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.107 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -50.13311 -50.12073 -50.11937 -42.27087 -40.61497 -39.45720 -39.37675 -37.77876 -36.30007 -34.53678 -33.06743 -31.96261 -31.41837 -31.33085 -28.02204 -27.05046 -25.94245 -24.42830 -24.06748 -23.57017 -22.74546 -21.88671 -20.72038 -19.71780 -18.83683 -18.77071 -18.61839 -18.43806 -18.16529 -17.56826 -17.47660 -17.17557 -16.94222 -16.83651 -16.60428 -16.53123 -16.22701 -16.04376 -15.71824 -15.62796 -15.49253 -15.31082 -15.06972 -14.73979 -14.50208 -14.32517 -14.00009 -13.85170 -13.75192 -13.71513 -13.56512 -13.45611 -13.12019 -12.96326 -12.50606 -12.39915 -12.36253 -11.99537 -11.93096 -11.66511 -11.24377 -10.86259 -10.64497 -10.61507 -10.28439 -9.87321 -9.79684 -9.58845 -4.98045 -0.84133 -0.33407 0.13834 0.25540 1.14129 1.34363 1.54680 1.69860 1.87742 2.18611 2.57094 2.72664 2.80410 3.00542 3.03963 3.22343 3.26687 3.35217 3.38103 3.44576 3.58095 3.65842 3.70621 3.73616 3.86047 4.05617 4.11792 4.26335 4.29313 4.32535 4.33903 4.41000 4.53822 4.60450 4.66165 4.68737 4.71265 4.79842 4.84198 4.86506 4.89938 5.02976 5.08224 5.30809 5.34991 5.43756 5.48551 5.90517 6.27453 6.48204 6.78162 6.96515 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.092 4.092 3 Si 0.769 3.231 4 C -0.053 4.053 5 C -0.131 4.131 6 C 0.143 3.857 7 F -0.122 7.122 8 C -0.146 4.146 9 C 0.556 3.444 10 O -0.537 6.537 11 N -0.679 5.679 12 C 0.194 3.806 13 C -0.116 4.116 14 C 0.087 3.913 15 F -0.136 7.136 16 C -0.161 4.161 17 C -0.092 4.092 18 C -0.137 4.137 19 C -0.070 4.070 20 C -0.120 4.120 21 C 0.093 3.907 22 H 0.091 0.909 23 O -0.560 6.560 24 C -0.188 4.188 25 C -0.077 4.077 26 C 0.104 3.896 27 F -0.126 7.126 28 H 0.402 0.598 29 H 0.105 0.895 30 H -0.275 1.275 31 H -0.289 1.289 32 H 0.168 0.832 33 H 0.418 0.582 34 H 0.152 0.848 35 H 0.156 0.844 36 H 0.143 0.857 37 H 0.118 0.882 38 H 0.098 0.902 39 H 0.116 0.884 40 H 0.398 0.602 41 H 0.111 0.889 42 H 0.061 0.939 43 H 0.176 0.824 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.906 -2.264 -4.413 5.313 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.200 4.200 3 Si 0.672 3.328 4 C -0.054 4.054 5 C -0.149 4.149 6 C 0.122 3.878 7 F -0.100 7.100 8 C -0.151 4.151 9 C 0.344 3.656 10 O -0.415 6.415 11 N -0.332 5.332 12 C 0.107 3.893 13 C -0.118 4.118 14 C 0.068 3.932 15 F -0.115 7.115 16 C -0.180 4.180 17 C -0.110 4.110 18 C -0.155 4.155 19 C -0.089 4.089 20 C -0.157 4.157 21 C 0.034 3.966 22 H 0.109 0.891 23 O -0.368 6.368 24 C -0.226 4.226 25 C -0.096 4.096 26 C 0.085 3.915 27 F -0.104 7.104 28 H 0.253 0.747 29 H 0.123 0.877 30 H -0.201 1.201 31 H -0.216 1.216 32 H 0.185 0.815 33 H 0.257 0.743 34 H 0.169 0.831 35 H 0.174 0.826 36 H 0.161 0.839 37 H 0.136 0.864 38 H 0.116 0.884 39 H 0.135 0.865 40 H 0.249 0.751 41 H 0.129 0.871 42 H 0.080 0.920 43 H 0.194 0.806 Dipole moment (debyes) X Y Z Total from point charges 2.561 -1.411 -3.603 4.640 hybrid contribution -2.068 -0.111 -0.131 2.076 sum 0.493 -1.523 -3.733 4.062 Atomic orbital electron populations 1.86539 1.17449 1.80984 1.51420 1.25012 0.85059 1.12707 0.97220 0.93951 0.90097 0.71302 0.77469 1.19498 0.97903 0.91966 0.96082 1.21048 1.00554 1.02167 0.91157 1.17688 0.96241 0.88297 0.85530 1.91605 1.83870 1.77560 1.56957 1.19790 1.06572 0.92274 0.96426 1.17962 0.78649 0.82691 0.86330 1.90934 1.45023 1.66466 1.39096 1.45325 1.62961 1.05345 1.19574 1.19922 0.89386 0.93497 0.86531 1.19743 0.96367 1.01192 0.94459 1.17484 0.91598 0.95030 0.89129 1.91356 1.76607 1.71060 1.72462 1.21388 0.93298 1.00826 1.02460 1.21344 1.00715 0.95684 0.93280 1.21477 0.95743 1.00591 0.97703 1.20924 0.93889 0.94782 0.99271 1.23443 0.96035 0.91817 1.04410 1.22569 0.88344 0.95145 0.90582 0.89086 1.86324 1.20195 1.95067 1.35200 1.24438 0.98696 0.99864 0.99646 1.21320 0.96028 1.02195 0.90082 1.17313 0.99171 0.88959 0.86106 1.91560 1.84451 1.78152 1.56277 0.74688 0.87719 1.20082 1.21594 0.81539 0.74251 0.83058 0.82591 0.83931 0.86364 0.88361 0.86549 0.75102 0.87086 0.92015 0.80643 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.08 12.86 -148.98 -1.92 -2.00 16 2 C -0.09 0.25 2.43 71.23 0.17 0.43 16 3 Si 0.77 -3.50 30.19 68.60 2.07 -1.43 16 4 C -0.05 -0.01 5.30 -19.78 -0.10 -0.11 16 5 C -0.13 -0.12 8.62 22.27 0.19 0.07 16 6 C 0.14 0.69 7.28 22.67 0.17 0.86 16 7 F -0.12 -1.22 15.55 44.97 0.70 -0.53 16 8 C -0.15 -0.44 5.88 -20.06 -0.12 -0.56 16 9 C 0.56 3.36 5.70 86.74 0.49 3.86 16 10 O -0.54 -7.23 12.53 -3.96 -0.05 -7.28 16 11 N -0.68 -0.88 4.37 -426.90 -1.86 -2.74 16 12 C 0.19 0.55 1.07 3.38 0.00 0.55 16 13 C -0.12 -0.70 4.56 -19.82 -0.09 -0.79 16 14 C 0.09 0.50 6.71 22.37 0.15 0.65 16 15 F -0.14 -0.68 12.93 44.97 0.58 -0.10 16 16 C -0.16 -0.53 10.03 22.31 0.22 -0.31 16 17 C -0.09 -0.17 10.04 22.26 0.22 0.05 16 18 C -0.14 -0.51 10.04 22.27 0.22 -0.29 16 19 C -0.07 -0.44 7.38 22.26 0.16 -0.28 16 20 C -0.12 0.17 6.87 31.12 0.21 0.39 16 21 C 0.09 -0.18 5.28 31.10 0.16 -0.01 16 22 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 23 O -0.56 1.56 12.91 -148.98 -1.92 -0.37 16 24 C -0.19 -0.59 6.91 31.10 0.22 -0.37 16 25 C -0.08 0.11 9.52 22.57 0.21 0.33 16 26 C 0.10 0.05 7.23 22.33 0.16 0.21 16 27 F -0.13 -0.25 16.73 44.97 0.75 0.50 16 28 H 0.40 -3.25 8.74 -74.06 -0.65 -3.89 16 29 H 0.10 -0.67 7.89 -2.39 -0.02 -0.69 16 30 H -0.27 0.25 7.11 99.48 0.71 0.95 16 31 H -0.29 -0.58 6.74 99.48 0.67 0.09 16 32 H 0.17 -0.28 4.87 -2.91 -0.01 -0.30 16 33 H 0.42 -1.39 6.45 -92.71 -0.60 -1.99 16 34 H 0.15 -0.10 8.06 -2.91 -0.02 -0.13 16 35 H 0.16 -0.57 8.06 -2.91 -0.02 -0.59 16 36 H 0.14 -0.03 8.06 -2.91 -0.02 -0.05 16 37 H 0.12 0.71 5.57 -2.91 -0.02 0.69 16 38 H 0.10 -0.34 8.12 -2.39 -0.02 -0.36 16 39 H 0.12 -0.21 6.93 -2.39 -0.02 -0.23 16 40 H 0.40 -3.50 9.12 -74.06 -0.68 -4.17 16 41 H 0.11 0.48 5.23 -2.39 -0.01 0.47 16 42 H 0.06 0.40 8.14 -2.39 -0.02 0.38 16 43 H 0.18 -1.22 6.40 -2.91 -0.02 -1.24 16 Total: 0.00 -21.00 362.55 0.25 -20.75 By element: Atomic # 1 Polarization: -10.71 SS G_CDS: -0.77 Total: -11.47 kcal Atomic # 6 Polarization: 2.00 SS G_CDS: 2.67 Total: 4.67 kcal Atomic # 7 Polarization: -0.88 SS G_CDS: -1.86 Total: -2.74 kcal Atomic # 8 Polarization: -5.76 SS G_CDS: -3.89 Total: -9.64 kcal Atomic # 9 Polarization: -2.16 SS G_CDS: 2.03 Total: -0.13 kcal Atomic # 14 Polarization: -3.50 SS G_CDS: 2.07 Total: -1.43 kcal Total: -21.00 0.25 -20.75 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_12360598.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.580 kcal (2) G-P(sol) polarization free energy of solvation -21.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.750 kcal (6) G-S(sol) free energy of system = (1) + (5) -129.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds