Wall clock time and date at job start Tue Mar 9 2021 13:37:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46940 * 2 1 4 4 C 1.50696 * 109.47359 * 239.99786 * 2 1 3 5 5 C 1.38634 * 119.94233 * 75.02373 * 4 2 1 6 6 F 1.35102 * 119.87550 * 0.02562 * 5 4 2 7 7 C 1.38678 * 120.24122 * 180.02562 * 5 4 2 8 8 C 1.37818 * 120.11756 * 359.95047 * 7 5 4 9 9 C 1.39675 * 119.87833 * 0.02562 * 8 7 5 10 10 C 1.47723 * 120.11266 * 179.97438 * 9 8 7 11 11 O 1.21567 * 119.99655 * 180.02562 * 10 9 8 12 12 N 1.34774 * 120.00224 * 0.02562 * 10 9 8 13 13 C 1.46504 * 119.99949 * 180.02562 * 12 10 9 14 14 C 1.50701 * 112.84751 * 309.66352 * 13 12 10 15 15 C 1.38437 * 120.01158 * 170.33008 * 14 13 12 16 16 F 1.35103 * 120.02703 * 0.03125 * 15 14 13 17 17 C 1.38483 * 119.94751 * 180.02562 * 15 14 13 18 18 C 1.38176 * 119.97428 * 0.02562 * 17 15 14 19 19 C 1.38264 * 120.02592 * 0.02562 * 18 17 15 20 20 C 1.38224 * 120.05344 * 359.71835 * 19 18 17 21 21 C 1.53781 * 113.61420 * 178.47074 * 13 12 10 22 22 C 1.53780 * 87.07812 * 270.88029 * 21 13 12 23 23 H 1.09001 * 113.61613 * 219.93450 * 22 21 13 24 24 O 1.42897 * 113.61354 * 89.11819 * 22 21 13 25 25 C 1.53777 * 113.61784 * 80.86044 * 13 12 10 26 26 C 1.37865 * 119.93882 * 254.99937 * 4 2 1 27 27 H 0.96696 * 114.00254 * 300.00095 * 1 2 3 28 28 H 1.09007 * 109.46592 * 119.99586 * 2 1 3 29 29 H 1.48497 * 109.99820 * 299.99288 * 3 2 1 30 30 H 1.48499 * 110.00049 * 61.32051 * 3 2 1 31 31 H 1.08000 * 119.94065 * 180.02562 * 7 5 4 32 32 H 1.07992 * 120.05755 * 180.30199 * 8 7 5 33 33 H 0.96993 * 120.00364 * 359.97438 * 12 10 9 34 34 H 1.08002 * 120.01220 * 179.97438 * 17 15 14 35 35 H 1.08004 * 119.98433 * 179.97438 * 18 17 15 36 36 H 1.08001 * 119.97142 * 179.97438 * 19 18 17 37 37 H 1.07996 * 119.99340 * 180.27919 * 20 19 18 38 38 H 1.08994 * 113.61662 * 25.42760 * 21 13 12 39 39 H 1.09002 * 113.61475 * 156.24752 * 21 13 12 40 40 H 0.96701 * 114.00449 * 179.97438 * 24 22 21 41 41 H 1.08996 * 113.62067 * 203.66468 * 25 13 12 42 42 H 1.09011 * 113.61374 * 334.57056 * 25 13 12 43 43 H 1.08001 * 120.05824 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.8694 -0.0834 -2.4653 6 9 1.3589 1.1637 -2.5619 7 6 2.3294 -0.7316 -3.6016 8 6 2.8521 -2.0034 -3.5085 9 6 2.9174 -2.6396 -2.2667 10 6 3.4760 -4.0031 -2.1610 11 8 3.5314 -4.5550 -1.0793 12 7 3.9243 -4.6351 -3.2637 13 6 4.4778 -5.9875 -3.1589 14 6 5.5256 -6.1090 -2.0826 15 6 6.0026 -7.3566 -1.7184 16 9 5.5296 -8.4656 -2.3279 17 6 6.9651 -7.4668 -0.7288 18 6 7.4479 -6.3318 -0.1058 19 6 6.9700 -5.0865 -0.4698 20 6 6.0131 -4.9748 -1.4610 21 6 4.9100 -6.5826 -4.5094 22 6 3.4761 -7.1223 -4.6412 23 1 3.4245 -8.1271 -5.0605 24 8 2.5771 -6.2099 -5.2748 25 6 3.4063 -7.0891 -3.1027 26 6 2.4523 -1.9826 -1.1259 27 1 -0.3933 0.4417 0.7650 28 1 1.7923 -0.5138 0.8901 29 1 1.5615 2.4678 -1.2086 30 1 1.5879 2.4586 1.2242 31 1 2.2792 -0.2384 -4.5611 32 1 3.2145 -2.5054 -4.3932 33 1 3.8798 -4.1949 -4.1269 34 1 7.3376 -8.4395 -0.4435 35 1 8.1982 -6.4176 0.6662 36 1 7.3476 -4.2000 0.0180 37 1 5.6438 -4.0012 -1.7476 38 1 5.1640 -5.8308 -5.2566 39 1 5.6655 -7.3634 -4.4208 40 1 1.6737 -6.5438 -5.3610 41 1 3.7502 -8.0091 -2.6301 42 1 2.4471 -6.7458 -2.7150 43 1 2.5009 -2.4698 -0.1632 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_12496548.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:15 Heat of formation + Delta-G solvation = -83.046690 kcal Electronic energy + Delta-G solvation = -33197.946720 eV Core-core repulsion = 28427.196028 eV Total energy + Delta-G solvation = -4770.750692 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.116 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -50.28556 -50.00289 -42.16981 -40.61154 -39.36610 -39.10330 -37.73433 -36.30285 -34.28106 -32.87258 -32.15851 -31.55709 -31.25923 -27.04033 -27.02872 -26.23765 -24.77338 -23.56315 -23.39104 -22.71332 -21.46921 -20.62637 -19.05455 -18.92254 -18.64861 -18.50879 -18.22961 -17.89525 -17.46523 -16.99112 -16.85191 -16.70913 -16.51689 -16.24854 -15.99287 -15.63554 -15.35935 -15.26231 -15.07185 -14.96234 -14.65592 -14.62398 -14.27618 -14.06392 -13.78625 -13.76657 -13.67622 -13.52743 -13.34362 -12.90799 -12.84567 -12.47110 -12.35248 -12.28368 -11.87570 -11.66759 -11.30118 -11.04660 -10.84423 -10.76637 -10.19901 -10.13158 -9.81936 -9.70758 -9.50086 -4.96360 -0.47822 -0.01979 0.22553 0.34505 1.21326 1.58844 1.63105 1.90118 2.01366 2.53071 2.65306 2.92162 3.02910 3.14719 3.31570 3.34919 3.45076 3.51230 3.53913 3.61751 3.69451 3.73473 3.88304 3.91693 4.07109 4.09914 4.20402 4.26748 4.38626 4.45000 4.57939 4.60683 4.61025 4.73634 4.79951 4.85911 4.89155 4.90595 4.97937 4.99332 5.06023 5.11838 5.14828 5.37752 5.51156 5.55976 5.60399 5.96968 6.35027 6.41931 6.55941 7.16008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.074 4.074 3 Si 0.672 3.328 4 C -0.115 4.115 5 C 0.135 3.865 6 F -0.118 7.118 7 C -0.157 4.157 8 C -0.050 4.050 9 C -0.148 4.148 10 C 0.559 3.441 11 O -0.518 6.518 12 N -0.695 5.695 13 C 0.202 3.798 14 C -0.103 4.103 15 C 0.102 3.898 16 F -0.135 7.135 17 C -0.154 4.154 18 C -0.091 4.091 19 C -0.128 4.128 20 C -0.057 4.057 21 C -0.126 4.126 22 C 0.082 3.918 23 H 0.076 0.924 24 O -0.551 6.551 25 C -0.184 4.184 26 C -0.010 4.010 27 H 0.383 0.617 28 H 0.081 0.919 29 H -0.227 1.227 30 H -0.264 1.264 31 H 0.147 0.853 32 H 0.139 0.861 33 H 0.408 0.592 34 H 0.136 0.864 35 H 0.132 0.868 36 H 0.129 0.871 37 H 0.123 0.877 38 H 0.087 0.913 39 H 0.113 0.887 40 H 0.385 0.615 41 H 0.117 0.883 42 H 0.079 0.921 43 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.434 -0.043 -1.575 3.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.183 4.183 3 Si 0.571 3.429 4 C -0.116 4.116 5 C 0.116 3.884 6 F -0.096 7.096 7 C -0.176 4.176 8 C -0.069 4.069 9 C -0.151 4.151 10 C 0.347 3.653 11 O -0.394 6.394 12 N -0.348 5.348 13 C 0.115 3.885 14 C -0.105 4.105 15 C 0.083 3.917 16 F -0.114 7.114 17 C -0.172 4.172 18 C -0.109 4.109 19 C -0.146 4.146 20 C -0.076 4.076 21 C -0.163 4.163 22 C 0.023 3.977 23 H 0.094 0.906 24 O -0.357 6.357 25 C -0.223 4.223 26 C -0.029 4.029 27 H 0.231 0.769 28 H 0.100 0.900 29 H -0.150 1.150 30 H -0.190 1.190 31 H 0.165 0.835 32 H 0.157 0.843 33 H 0.245 0.755 34 H 0.154 0.846 35 H 0.150 0.850 36 H 0.146 0.854 37 H 0.141 0.859 38 H 0.106 0.894 39 H 0.131 0.869 40 H 0.233 0.767 41 H 0.135 0.865 42 H 0.098 0.902 43 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.841 0.468 -1.423 4.123 hybrid contribution -1.943 -0.282 0.134 1.968 sum 1.898 0.186 -1.289 2.302 Atomic orbital electron populations 1.86602 1.17248 1.80171 1.50035 1.24659 0.84924 1.11364 0.97350 0.95530 0.91471 0.75010 0.80886 1.19199 1.03679 0.95748 0.93015 1.17894 0.95718 0.80665 0.94153 1.91569 1.84321 1.37429 1.96325 1.21113 1.02209 0.96029 0.98240 1.21210 0.95241 0.93624 0.96836 1.19916 1.05603 0.95200 0.94373 1.18067 0.77708 0.85292 0.84240 1.90873 1.54548 1.66930 1.27029 1.45459 1.63006 1.15633 1.10671 1.19761 0.92094 0.82876 0.93802 1.19587 0.98679 0.92307 0.99965 1.17312 0.97292 0.81567 0.95532 1.91369 1.86628 1.51529 1.81839 1.21102 0.98323 1.00555 0.97264 1.21039 0.99181 0.91714 0.98953 1.21203 0.97558 0.97984 0.97889 1.20829 0.94422 0.97665 0.94650 1.23443 0.96368 1.01561 0.94973 1.22700 0.90439 0.92718 0.91836 0.90562 1.86363 1.23620 1.44751 1.81015 1.24493 0.99966 1.00079 0.97727 1.20990 0.91722 0.91036 0.99110 0.76893 0.90050 1.15036 1.18960 0.83523 0.84300 0.75462 0.84610 0.84967 0.85353 0.85885 0.89401 0.86890 0.76676 0.86505 0.90209 0.83325 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.96 12.86 -35.23 -0.45 -1.41 16 2 C -0.07 -0.03 2.79 36.00 0.10 0.07 16 3 Si 0.67 -0.07 30.77 -169.99 -5.23 -5.30 16 4 C -0.12 -0.14 4.81 -104.61 -0.50 -0.64 16 5 C 0.14 0.19 6.67 -39.27 -0.26 -0.07 16 6 F -0.12 -0.36 12.83 2.25 0.03 -0.33 16 7 C -0.16 0.10 10.01 -39.57 -0.40 -0.30 16 8 C -0.05 0.07 9.54 -39.20 -0.37 -0.30 16 9 C -0.15 -0.07 5.87 -104.97 -0.62 -0.68 16 10 C 0.56 0.92 5.71 -12.39 -0.07 0.85 16 11 O -0.52 -2.46 13.74 5.31 0.07 -2.39 16 12 N -0.70 0.08 4.31 -48.89 -0.21 -0.13 16 13 C 0.20 0.14 1.03 -132.16 -0.14 0.00 16 14 C -0.10 -0.21 4.56 -104.55 -0.48 -0.69 16 15 C 0.10 0.21 6.71 -39.42 -0.26 -0.05 16 16 F -0.14 -0.25 12.93 2.25 0.03 -0.22 16 17 C -0.15 -0.17 10.03 -39.51 -0.40 -0.57 16 18 C -0.09 -0.04 10.04 -39.59 -0.40 -0.44 16 19 C -0.13 -0.12 10.04 -39.58 -0.40 -0.52 16 20 C -0.06 -0.11 7.48 -39.59 -0.30 -0.41 16 21 C -0.13 0.11 6.87 -25.92 -0.18 -0.07 16 22 C 0.08 -0.08 5.28 -25.78 -0.14 -0.22 16 23 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 24 O -0.55 0.69 12.95 -35.23 -0.46 0.23 16 25 C -0.18 -0.15 6.92 -25.78 -0.18 -0.33 16 26 C -0.01 -0.01 9.21 -39.20 -0.36 -0.37 16 27 H 0.38 -0.84 8.74 45.56 0.40 -0.45 16 28 H 0.08 -0.12 7.77 -51.92 -0.40 -0.52 16 29 H -0.23 -0.66 5.33 56.52 0.30 -0.36 16 30 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 31 H 0.15 -0.37 8.06 -52.49 -0.42 -0.80 16 32 H 0.14 -0.55 6.40 -52.49 -0.34 -0.89 16 33 H 0.41 -0.81 6.50 -40.82 -0.27 -1.07 16 34 H 0.14 -0.08 8.06 -52.49 -0.42 -0.50 16 35 H 0.13 -0.24 8.06 -52.48 -0.42 -0.66 16 36 H 0.13 -0.13 8.06 -52.49 -0.42 -0.55 16 37 H 0.12 0.18 5.66 -52.49 -0.30 -0.11 16 38 H 0.09 -0.13 8.11 -51.93 -0.42 -0.55 16 39 H 0.11 -0.12 6.93 -51.93 -0.36 -0.48 16 40 H 0.39 -1.63 9.12 45.56 0.42 -1.22 16 41 H 0.12 0.15 5.22 -51.93 -0.27 -0.12 16 42 H 0.08 0.18 8.14 -51.92 -0.42 -0.25 16 43 H 0.15 0.12 7.59 -52.49 -0.40 -0.28 16 LS Contribution 356.97 15.07 5.38 5.38 Total: 0.00 -8.40 356.97 -9.95 -18.35 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -3.77 Total: -9.46 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -5.34 Total: -4.72 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.21 Total: -0.13 kcal Atomic # 8 Polarization: -2.73 SS G_CDS: -0.84 Total: -3.57 kcal Atomic # 9 Polarization: -0.61 SS G_CDS: 0.06 Total: -0.55 kcal Atomic # 14 Polarization: -0.07 SS G_CDS: -5.23 Total: -5.30 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -8.40 -9.95 -18.35 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_12496548.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.695 kcal (2) G-P(sol) polarization free energy of solvation -8.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.954 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.352 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.047 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds