Wall clock time and date at job start Tue Mar 9 2021 13:39:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86301 * 109.47353 * 2 1 4 4 C 1.50700 * 109.47381 * 120.00108 * 2 1 3 5 5 C 1.38239 * 119.97165 * 245.00210 * 4 2 1 6 6 C 1.38288 * 120.11401 * 180.02562 * 5 4 2 7 7 C 1.38129 * 120.05174 * 0.02562 * 6 5 4 8 8 C 1.38746 * 119.94595 * 359.97438 * 7 6 5 9 9 O 1.35896 * 120.05833 * 180.02562 * 8 7 6 10 10 C 1.42905 * 116.99835 * 0.02562 * 9 8 7 11 11 C 1.50702 * 109.47043 * 179.97438 * 10 9 8 12 12 O 1.21279 * 119.99993 * 359.97438 * 11 10 9 13 13 N 1.34776 * 120.00184 * 179.97438 * 11 10 9 14 14 C 1.46496 * 120.00371 * 180.02562 * 13 11 10 15 15 C 1.50699 * 112.84720 * 309.66667 * 14 13 11 16 16 C 1.38440 * 120.01197 * 168.52989 * 15 14 13 17 17 F 1.35103 * 120.02569 * 0.24883 * 16 15 14 18 18 C 1.38479 * 119.95045 * 180.23545 * 16 15 14 19 19 C 1.38182 * 119.97488 * 0.05901 * 18 16 15 20 20 C 1.38274 * 120.02410 * 359.96020 * 19 18 16 21 21 C 1.38219 * 120.04966 * 0.02562 * 20 19 18 22 22 C 1.53782 * 113.61336 * 178.47579 * 14 13 11 23 23 C 1.53785 * 87.07514 * 270.79520 * 22 14 13 24 24 H 1.09003 * 113.61240 * 219.93362 * 23 22 14 25 25 O 1.42904 * 113.61031 * 89.12165 * 23 22 14 26 26 C 1.53778 * 87.08611 * 334.56850 * 23 22 14 27 27 C 1.38166 * 119.96896 * 65.24834 * 4 2 1 28 28 H 0.96696 * 113.99726 * 300.00312 * 1 2 3 29 29 H 1.09009 * 109.47427 * 239.99807 * 2 1 3 30 30 H 1.48502 * 109.99868 * 178.68217 * 3 2 1 31 31 H 1.48500 * 110.00008 * 299.99764 * 3 2 1 32 32 H 1.08004 * 119.94900 * 359.97438 * 5 4 2 33 33 H 1.07997 * 119.97996 * 179.97438 * 6 5 4 34 34 H 1.07998 * 120.02811 * 179.97438 * 7 6 5 35 35 H 1.09006 * 109.46777 * 60.00265 * 10 9 8 36 36 H 1.08990 * 109.47107 * 299.99912 * 10 9 8 37 37 H 0.97003 * 119.99564 * 0.02562 * 13 11 10 38 38 H 1.07997 * 120.01371 * 180.02562 * 18 16 15 39 39 H 1.07994 * 119.99136 * 179.97438 * 19 18 16 40 40 H 1.07990 * 119.97322 * 180.02562 * 20 19 18 41 41 H 1.07998 * 119.98906 * 180.02562 * 21 20 19 42 42 H 1.08990 * 113.61932 * 25.34182 * 22 14 13 43 43 H 1.09002 * 113.61112 * 156.17212 * 22 14 13 44 44 H 0.96702 * 113.99565 * 179.97438 * 25 23 22 45 45 H 1.09002 * 113.61319 * 270.88895 * 26 23 22 46 46 H 1.09000 * 113.61443 * 139.97513 * 26 23 22 47 47 H 1.07996 * 120.03451 * 0.02562 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6387 -0.0117 2.1909 6 6 3.1015 -0.6608 3.3208 7 6 2.8584 -2.0097 3.4922 8 6 2.1487 -2.7132 2.5296 9 8 1.9077 -4.0402 2.6961 10 6 2.4140 -4.6472 3.8867 11 6 2.0522 -6.1101 3.8977 12 8 1.4224 -6.5859 2.9770 13 7 2.4285 -6.8896 4.9308 14 6 2.0773 -8.3118 4.9412 15 6 0.6151 -8.5554 4.6703 16 6 0.1633 -9.8380 4.4103 17 9 1.0321 -10.8725 4.4042 18 6 -1.1799 -10.0597 4.1566 19 6 -2.0675 -9.0006 4.1622 20 6 -1.6151 -7.7200 4.4216 21 6 -0.2747 -7.4976 4.6752 22 6 2.6109 -9.0690 6.1688 23 6 3.8854 -9.3373 5.3511 24 1 4.2882 -10.3410 5.4872 25 8 4.8777 -8.3179 5.4869 26 6 3.0152 -9.1862 4.0923 27 6 1.6889 -2.0606 1.3951 28 1 -0.3933 0.4417 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 3.5346 1.7702 0.0321 31 1 1.5616 2.4679 -1.2085 32 1 2.8309 1.0428 2.0582 33 1 3.6542 -0.1129 4.0696 34 1 3.2204 -2.5163 4.3746 35 1 1.9770 -4.1586 4.7577 36 1 3.4983 -4.5405 3.9160 37 1 2.9320 -6.5089 5.6673 38 1 -1.5335 -11.0598 3.9541 39 1 -3.1150 -9.1732 3.9640 40 1 -2.3095 -6.8930 4.4261 41 1 0.0776 -6.4971 4.8781 42 1 2.7755 -8.4316 7.0374 43 1 2.0450 -9.9700 6.4059 44 1 5.6818 -8.4813 4.9752 45 1 2.5607 -10.1199 3.7610 46 1 3.5062 -8.6432 3.2847 47 1 1.1401 -2.6071 0.6424 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_4860298.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:39:53 Heat of formation + Delta-G solvation = -82.834966 kcal Electronic energy + Delta-G solvation = -34294.000844 eV Core-core repulsion = 29518.493498 eV Total energy + Delta-G solvation = -4775.507346 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.141 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.04332 -42.15172 -41.30258 -39.81299 -39.38358 -38.75787 -37.21179 -36.31057 -34.11263 -32.50294 -32.09666 -31.56474 -31.27958 -29.31411 -27.06093 -26.83596 -25.79750 -23.70204 -23.69198 -23.14160 -22.43436 -21.56550 -20.67929 -19.33955 -18.86512 -18.52439 -18.19485 -17.75376 -17.48035 -17.43809 -17.23377 -16.97739 -16.80922 -16.70094 -16.47986 -16.13954 -15.65775 -15.59216 -15.32074 -15.24019 -14.95363 -14.73267 -14.58405 -14.32512 -14.14905 -13.95408 -13.80242 -13.71316 -13.58949 -13.39261 -12.98985 -12.90702 -12.57788 -12.49887 -12.34309 -12.19394 -11.96919 -11.89009 -11.70472 -11.66997 -10.99480 -10.83173 -10.47436 -10.21597 -9.95800 -9.75699 -9.52116 -9.28835 -5.03196 0.17806 0.20851 0.32362 0.37817 1.24534 1.39282 1.47033 1.64506 1.97721 2.47729 2.62598 2.64507 2.89187 3.28527 3.31722 3.39099 3.45328 3.48448 3.62426 3.62943 3.69543 3.73236 3.86125 3.88626 3.90267 3.99239 4.06467 4.16288 4.22756 4.33564 4.37049 4.42729 4.51577 4.57791 4.57915 4.60107 4.76952 4.86002 4.88356 4.94347 4.96431 5.09512 5.12008 5.20967 5.32594 5.35383 5.41254 5.49086 5.54739 5.62846 5.95201 6.23345 6.38057 6.51879 6.57934 7.10368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.071 4.071 3 Si 0.692 3.308 4 C -0.080 4.080 5 C -0.153 4.153 6 C -0.073 4.073 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.287 6.287 10 C 0.041 3.959 11 C 0.512 3.488 12 O -0.497 6.497 13 N -0.697 5.697 14 C 0.204 3.796 15 C -0.105 4.105 16 C 0.103 3.897 17 F -0.134 7.134 18 C -0.152 4.152 19 C -0.090 4.090 20 C -0.127 4.127 21 C -0.059 4.059 22 C -0.124 4.124 23 C 0.083 3.917 24 H 0.077 0.923 25 O -0.552 6.552 26 C -0.188 4.188 27 C -0.121 4.121 28 H 0.379 0.621 29 H 0.115 0.885 30 H -0.257 1.257 31 H -0.254 1.254 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.130 0.870 35 H 0.094 0.906 36 H 0.095 0.905 37 H 0.410 0.590 38 H 0.137 0.863 39 H 0.133 0.867 40 H 0.129 0.871 41 H 0.121 0.879 42 H 0.088 0.912 43 H 0.113 0.887 44 H 0.385 0.615 45 H 0.121 0.879 46 H 0.079 0.921 47 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.621 1.821 6.470 6.914 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.181 4.181 3 Si 0.594 3.406 4 C -0.080 4.080 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.296 3.704 12 O -0.369 6.369 13 N -0.352 5.352 14 C 0.117 3.883 15 C -0.107 4.107 16 C 0.083 3.917 17 F -0.113 7.113 18 C -0.171 4.171 19 C -0.108 4.108 20 C -0.145 4.145 21 C -0.077 4.077 22 C -0.162 4.162 23 C 0.023 3.977 24 H 0.095 0.905 25 O -0.358 6.358 26 C -0.226 4.226 27 C -0.139 4.139 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.182 1.182 31 H -0.180 1.180 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.148 0.852 35 H 0.112 0.888 36 H 0.113 0.887 37 H 0.246 0.754 38 H 0.155 0.845 39 H 0.151 0.849 40 H 0.147 0.853 41 H 0.139 0.861 42 H 0.107 0.893 43 H 0.131 0.869 44 H 0.233 0.767 45 H 0.138 0.862 46 H 0.097 0.903 47 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.218 1.861 5.060 5.527 hybrid contribution 1.094 -0.794 -0.014 1.352 sum 2.312 1.066 5.046 5.652 Atomic orbital electron populations 1.86527 1.16858 1.81713 1.49178 1.25135 0.85433 1.10263 0.97301 0.94701 0.81022 0.77753 0.87155 1.20153 0.97780 0.93582 0.96516 1.20923 1.01451 0.99556 0.95118 1.20913 0.97535 0.93609 0.97005 1.21302 1.04669 0.96068 1.00435 1.19042 0.95355 0.82442 0.94755 1.86172 1.73717 1.20049 1.40028 1.22449 1.00804 0.91808 0.88702 1.19997 0.80127 0.87458 0.82805 1.90847 1.37118 1.74479 1.34489 1.45368 1.58031 1.08016 1.23749 1.19751 0.89489 0.80957 0.98132 1.19589 0.95101 0.92246 1.03735 1.17297 0.87532 0.83256 1.03584 1.91345 1.68404 1.57429 1.94081 1.21110 0.91390 1.01022 1.03593 1.21049 0.99845 0.92038 0.97889 1.21207 0.95668 0.97367 1.00250 1.20770 0.92604 0.97832 0.96489 1.23436 0.94970 1.01356 0.96440 1.22653 0.88400 0.91201 0.95416 0.90519 1.86364 1.29384 1.47520 1.72538 1.24527 0.97847 1.02061 0.98192 1.20276 1.02895 0.93651 0.97104 0.77339 0.86744 1.18225 1.17951 0.85320 0.85050 0.85229 0.88832 0.88690 0.75404 0.84525 0.84884 0.85345 0.86150 0.89340 0.86898 0.76689 0.86152 0.90278 0.84694 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.49 12.84 -35.23 -0.45 -0.95 16 2 C -0.07 -0.03 2.80 36.01 0.10 0.07 16 3 Si 0.69 -0.62 29.80 -169.99 -5.07 -5.68 16 4 C -0.08 -0.07 5.35 -104.65 -0.56 -0.63 16 5 C -0.15 0.08 8.67 -39.56 -0.34 -0.27 16 6 C -0.07 0.07 10.04 -39.60 -0.40 -0.33 16 7 C -0.21 0.06 9.04 -39.43 -0.36 -0.30 16 8 C 0.13 0.26 6.69 -39.22 -0.26 0.00 16 9 O -0.29 -0.88 9.67 -39.32 -0.38 -1.26 16 10 C 0.04 -0.02 5.22 36.01 0.19 0.16 16 11 C 0.51 0.85 5.89 -10.98 -0.06 0.79 16 12 O -0.50 -3.02 13.97 -14.35 -0.20 -3.22 16 13 N -0.70 0.32 4.34 -47.93 -0.21 0.11 16 14 C 0.20 0.15 1.03 -132.16 -0.14 0.01 16 15 C -0.10 -0.25 4.52 -104.55 -0.47 -0.73 16 16 C 0.10 0.25 6.73 -39.42 -0.27 -0.01 16 17 F -0.13 -0.28 12.95 2.25 0.03 -0.25 16 18 C -0.15 -0.24 10.03 -39.51 -0.40 -0.64 16 19 C -0.09 -0.10 10.04 -39.59 -0.40 -0.49 16 20 C -0.13 -0.22 10.04 -39.58 -0.40 -0.61 16 21 C -0.06 -0.15 7.50 -39.59 -0.30 -0.44 16 22 C -0.12 0.11 6.89 -25.92 -0.18 -0.06 16 23 C 0.08 -0.09 5.28 -25.92 -0.14 -0.23 16 24 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 25 O -0.55 0.84 12.96 -35.23 -0.46 0.38 16 26 C -0.19 -0.17 6.91 -25.92 -0.18 -0.35 16 27 C -0.12 -0.29 9.63 -39.43 -0.38 -0.67 16 28 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 29 H 0.12 0.11 7.96 -51.92 -0.41 -0.30 16 30 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 31 H -0.25 -0.61 7.11 56.52 0.40 -0.21 16 32 H 0.13 -0.33 4.90 -52.48 -0.26 -0.59 16 33 H 0.13 -0.43 8.06 -52.49 -0.42 -0.85 16 34 H 0.13 -0.36 6.30 -52.49 -0.33 -0.69 16 35 H 0.09 -0.31 7.66 -51.93 -0.40 -0.70 16 36 H 0.10 -0.25 7.66 -51.93 -0.40 -0.65 16 37 H 0.41 -1.14 8.47 -40.82 -0.35 -1.48 16 38 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 39 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 40 H 0.13 0.00 8.06 -52.49 -0.42 -0.43 16 41 H 0.12 0.23 5.79 -52.49 -0.30 -0.07 16 42 H 0.09 -0.15 8.11 -51.93 -0.42 -0.57 16 43 H 0.11 -0.12 7.09 -51.93 -0.37 -0.49 16 44 H 0.38 -1.77 9.12 45.56 0.42 -1.35 16 45 H 0.12 0.18 5.07 -51.93 -0.26 -0.09 16 46 H 0.08 0.18 8.14 -51.93 -0.42 -0.24 16 47 H 0.14 0.43 8.06 -52.49 -0.42 0.01 16 LS Contribution 386.46 15.07 5.82 5.82 Total: 0.00 -10.15 386.46 -10.69 -20.84 By element: Atomic # 1 Polarization: -6.22 SS G_CDS: -4.85 Total: -11.06 kcal Atomic # 6 Polarization: 0.20 SS G_CDS: -4.93 Total: -4.73 kcal Atomic # 7 Polarization: 0.32 SS G_CDS: -0.21 Total: 0.11 kcal Atomic # 8 Polarization: -3.56 SS G_CDS: -1.49 Total: -5.05 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.03 Total: -0.25 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: -5.07 Total: -5.68 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -10.15 -10.69 -20.84 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_4860298.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.996 kcal (2) G-P(sol) polarization free energy of solvation -10.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.687 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.839 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds