Wall clock time and date at job start Tue Mar 9 2021 13:40:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37645 * 125.67024 * 2 1 4 4 C 1.46665 * 126.22781 * 359.97438 * 3 2 1 5 5 O 1.21697 * 120.00203 * 4.68713 * 4 3 2 6 6 N 1.34778 * 119.99939 * 184.67624 * 4 3 2 7 7 C 1.46504 * 119.99835 * 174.60028 * 6 4 3 8 8 C 1.50703 * 112.85068 * 309.67423 * 7 6 4 9 9 C 1.38441 * 120.01030 * 170.31079 * 8 7 6 10 10 F 1.35097 * 120.02652 * 0.02562 * 9 8 7 11 11 C 1.38481 * 119.94308 * 180.02562 * 9 8 7 12 12 C 1.38171 * 119.97920 * 359.97438 * 11 9 8 13 13 C 1.38266 * 120.02523 * 359.75016 * 12 11 9 14 14 C 1.38210 * 120.01367 * 350.32653 * 8 7 6 15 15 C 1.53784 * 113.61284 * 178.47365 * 7 6 4 16 16 C 1.53775 * 87.08095 * 270.80175 * 15 7 6 17 17 H 1.09000 * 113.61873 * 220.01817 * 16 15 7 18 18 O 1.42901 * 113.61524 * 89.20305 * 16 15 7 19 19 C 1.53787 * 113.61332 * 80.86854 * 7 6 4 20 20 C 1.37892 * 107.54418 * 179.72331 * 3 2 1 21 21 C 1.39872 * 107.09156 * 0.24214 * 20 3 2 22 22 Br 1.89103 * 126.06970 * 179.97438 * 21 20 3 23 23 C 1.35506 * 107.85563 * 0.02562 * 21 20 3 24 24 C 1.50699 * 125.56942 * 180.02562 * 23 21 20 25 25 O 1.42903 * 109.47134 * 149.97440 * 24 23 21 26 26 Si 1.86301 * 109.47375 * 29.97203 * 24 23 21 27 27 H 1.09000 * 109.47148 * 95.16886 * 1 2 3 28 28 H 1.08996 * 109.46973 * 215.16336 * 1 2 3 29 29 H 1.08995 * 109.47470 * 335.16922 * 1 2 3 30 30 H 0.96995 * 120.00278 * 354.60787 * 6 4 3 31 31 H 1.08009 * 120.00671 * 179.97438 * 11 9 8 32 32 H 1.07994 * 119.98841 * 180.02562 * 12 11 9 33 33 H 1.08003 * 119.97851 * 180.27184 * 13 12 11 34 34 H 1.08007 * 119.98665 * 359.96634 * 14 8 7 35 35 H 1.08997 * 113.61270 * 25.35299 * 15 7 6 36 36 H 1.08999 * 113.61028 * 156.16917 * 15 7 6 37 37 H 0.96704 * 114.00045 * 180.02562 * 18 16 15 38 38 H 1.08995 * 113.61423 * 203.74597 * 19 7 6 39 39 H 1.08997 * 113.60950 * 334.65215 * 19 7 6 40 40 H 1.07995 * 126.45178 * 180.24038 * 20 3 2 41 41 H 1.09000 * 109.47352 * 269.97155 * 24 23 21 42 42 H 0.96695 * 113.99567 * 300.00036 * 25 24 23 43 43 H 1.48501 * 109.99846 * 58.68137 * 26 24 23 44 44 H 1.48496 * 109.99973 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1182 0.0000 4 6 1.8120 2.5123 -0.0005 5 8 0.6245 2.7643 0.0851 6 7 2.7084 3.5142 -0.0956 7 6 2.2481 4.8999 -0.2154 8 6 1.2152 5.0821 -1.2975 9 6 0.5325 6.2813 -1.4083 10 9 0.7922 7.2891 -0.5469 11 6 -0.4167 6.4470 -2.4029 12 6 -0.6811 5.4158 -3.2837 13 6 0.0054 4.2204 -3.1756 14 6 0.9489 4.0518 -2.1795 15 6 3.3921 5.9259 -0.2766 16 6 3.3199 5.9806 1.2584 17 1 3.4382 6.9847 1.6657 18 8 4.1544 5.0177 1.9054 19 6 1.8519 5.5357 1.1277 20 6 3.5781 0.6892 0.0063 21 6 3.5529 -0.7093 0.0045 22 35 5.0611 -1.8500 0.0104 23 6 2.2558 -1.1014 -0.0033 24 6 1.7715 -2.5284 -0.0072 25 8 0.5099 -2.6051 0.6596 26 14 3.0076 -3.6063 0.8766 27 1 -0.3633 -0.0926 -1.0235 28 1 -0.3633 -0.8401 0.5918 29 1 -0.3634 0.9326 0.4315 30 1 3.6582 3.3179 -0.0849 31 1 -0.9502 7.3821 -2.4901 32 1 -1.4210 5.5449 -4.0596 33 1 -0.1987 3.4164 -3.8672 34 1 1.4816 3.1162 -2.0934 35 1 4.3277 5.5144 -0.6554 36 1 3.1139 6.8614 -0.7618 37 1 4.1130 5.0470 2.8711 38 1 1.1515 6.3649 1.0285 39 1 1.5460 4.8097 1.8809 40 1 4.4582 1.3152 0.0117 41 1 1.6602 -2.8716 -1.0358 42 1 0.5341 -2.3145 1.5815 43 1 3.1920 -3.1293 2.2708 44 1 2.5412 -5.0161 0.8802 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_5000100.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:03 Heat of formation + Delta-G solvation = -27.682143 kcal Electronic energy + Delta-G solvation = -34190.353079 eV Core-core repulsion = 29458.901758 eV Total energy + Delta-G solvation = -4731.451321 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 425.047 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.13725 -43.00896 -41.87855 -39.50913 -39.42051 -38.05563 -36.30282 -34.80898 -34.12490 -32.36526 -31.97306 -31.36383 -31.11938 -27.53565 -27.24829 -27.03600 -25.67733 -23.84398 -23.52284 -22.66059 -21.68228 -20.77575 -20.57035 -19.08180 -18.78962 -18.40387 -18.10354 -17.63692 -17.25031 -17.05324 -16.92767 -16.68332 -16.43331 -16.15418 -15.82224 -15.56260 -15.50837 -15.28900 -15.01970 -14.78220 -14.64616 -14.57380 -14.33545 -14.08627 -13.84395 -13.73792 -13.65256 -13.46393 -13.20403 -13.00384 -12.80906 -12.53708 -12.46865 -12.36973 -12.06803 -11.94568 -11.68512 -11.62868 -11.20495 -10.87383 -10.81916 -10.28539 -9.92454 -9.87911 -9.63237 -9.36102 -4.70387 0.10182 0.11582 0.21809 0.33728 0.88244 1.16736 1.41311 1.53478 1.89839 2.09389 2.17222 2.53554 3.00954 3.02823 3.20058 3.25867 3.31703 3.41883 3.48425 3.64151 3.72985 3.75529 3.85610 4.02195 4.09611 4.24746 4.26435 4.30092 4.32992 4.38832 4.39795 4.61255 4.61571 4.66268 4.71211 4.80874 4.83661 4.88779 4.90489 4.99377 5.06600 5.20215 5.28739 5.41013 5.49570 5.55387 5.75595 5.86755 6.18068 6.36085 6.80601 7.02354 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 N -0.386 5.386 3 C -0.056 4.056 4 C 0.592 3.408 5 O -0.558 6.558 6 N -0.676 5.676 7 C 0.198 3.802 8 C -0.112 4.112 9 C 0.088 3.912 10 F -0.136 7.136 11 C -0.158 4.158 12 C -0.093 4.093 13 C -0.135 4.135 14 C -0.077 4.077 15 C -0.120 4.120 16 C 0.093 3.907 17 H 0.090 0.910 18 O -0.558 6.558 19 C -0.186 4.186 20 C -0.092 4.092 21 C -0.189 4.189 22 Br 0.090 6.910 23 C 0.058 3.942 24 C -0.039 4.039 25 O -0.540 6.540 26 Si 0.628 3.372 27 H 0.081 0.919 28 H 0.114 0.886 29 H 0.095 0.905 30 H 0.419 0.581 31 H 0.152 0.848 32 H 0.156 0.844 33 H 0.141 0.859 34 H 0.117 0.883 35 H 0.098 0.902 36 H 0.116 0.884 37 H 0.398 0.602 38 H 0.110 0.890 39 H 0.061 0.939 40 H 0.181 0.819 41 H 0.142 0.858 42 H 0.387 0.613 43 H -0.280 1.280 44 H -0.268 1.268 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.388 2.372 -2.054 4.618 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 N -0.058 5.058 3 C -0.170 4.170 4 C 0.380 3.620 5 O -0.438 6.438 6 N -0.327 5.327 7 C 0.111 3.889 8 C -0.114 4.114 9 C 0.069 3.931 10 F -0.114 7.114 11 C -0.177 4.177 12 C -0.111 4.111 13 C -0.153 4.153 14 C -0.095 4.095 15 C -0.158 4.158 16 C 0.033 3.967 17 H 0.108 0.892 18 O -0.366 6.366 19 C -0.224 4.224 20 C -0.119 4.119 21 C -0.274 4.274 22 Br 0.174 6.826 23 C -0.065 4.065 24 C -0.149 4.149 25 O -0.347 6.347 26 Si 0.529 3.471 27 H 0.100 0.900 28 H 0.132 0.868 29 H 0.114 0.886 30 H 0.258 0.742 31 H 0.170 0.830 32 H 0.174 0.826 33 H 0.159 0.841 34 H 0.135 0.865 35 H 0.116 0.884 36 H 0.134 0.866 37 H 0.248 0.752 38 H 0.128 0.872 39 H 0.080 0.920 40 H 0.199 0.801 41 H 0.159 0.841 42 H 0.236 0.764 43 H -0.206 1.206 44 H -0.193 1.193 Dipole moment (debyes) X Y Z Total from point charges 2.810 1.312 -2.473 3.967 hybrid contribution -1.264 0.678 1.597 2.147 sum 1.546 1.990 -0.876 2.668 Atomic orbital electron populations 1.22717 0.74333 1.06505 1.05104 1.43889 1.07633 1.03657 1.50624 1.20098 0.90329 0.87679 1.18899 1.16874 0.85548 0.83536 0.75999 1.90844 1.17127 1.84752 1.51030 1.45083 1.10187 1.03830 1.73619 1.19877 0.94010 0.81817 0.93205 1.19764 0.99724 0.93488 0.98427 1.17486 0.98998 0.85110 0.91551 1.91363 1.93199 1.59001 1.67863 1.21404 0.98628 1.02072 0.95607 1.21334 0.99097 0.92021 0.98614 1.21455 0.96517 0.98692 0.98644 1.20875 0.97497 0.97352 0.93773 1.23439 0.97783 0.98871 0.95691 1.22613 0.88085 0.92462 0.93529 0.89206 1.86345 1.66030 1.58574 1.25690 1.24450 0.99932 1.01711 0.96345 1.21473 0.95601 0.92662 1.02148 1.20660 0.90672 0.94807 1.21303 1.96315 1.32770 1.56182 1.97355 1.20981 0.89580 0.90247 1.05656 1.24707 0.92997 0.92550 1.04663 1.86545 1.29685 1.88545 1.29965 0.92714 0.92526 0.78006 0.83815 0.90030 0.86784 0.88614 0.74191 0.83014 0.82627 0.84110 0.86539 0.88365 0.86603 0.75178 0.87198 0.92002 0.80148 0.84077 0.76374 1.20570 1.19335 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.09 10.31 127.77 1.32 1.41 16 2 N -0.39 -1.13 3.16 -519.62 -1.64 -2.77 16 3 C -0.06 -0.16 6.89 40.35 0.28 0.12 16 4 C 0.59 2.72 5.51 86.44 0.48 3.19 16 5 O -0.56 -5.72 12.36 -4.34 -0.05 -5.78 16 6 N -0.68 -0.37 4.35 -427.82 -1.86 -2.23 16 7 C 0.20 0.34 0.99 3.39 0.00 0.35 16 8 C -0.11 -0.52 4.59 -19.82 -0.09 -0.61 16 9 C 0.09 0.39 6.71 22.38 0.15 0.54 16 10 F -0.14 -0.53 12.93 44.97 0.58 0.05 16 11 C -0.16 -0.32 10.03 22.31 0.22 -0.10 16 12 C -0.09 -0.05 10.04 22.26 0.22 0.17 16 13 C -0.14 -0.31 10.04 22.27 0.22 -0.08 16 14 C -0.08 -0.37 7.65 22.26 0.17 -0.20 16 15 C -0.12 0.25 6.88 31.12 0.21 0.46 16 16 C 0.09 -0.23 5.28 31.18 0.16 -0.07 16 17 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 18 O -0.56 1.78 12.97 -148.98 -1.93 -0.15 16 19 C -0.19 -0.40 6.92 31.18 0.22 -0.18 16 20 C -0.09 0.05 10.34 22.58 0.23 0.28 16 21 C -0.19 -0.09 6.15 22.03 0.14 0.04 16 22 Br 0.09 -0.19 28.25 -20.37 -0.58 -0.77 16 23 C 0.06 0.10 6.15 41.35 0.25 0.35 16 24 C -0.04 -0.02 2.99 71.24 0.21 0.19 16 25 O -0.54 -0.67 10.10 -148.98 -1.51 -2.18 16 26 Si 0.63 1.64 27.11 68.60 1.86 3.50 16 27 H 0.08 0.08 8.14 -2.39 -0.02 0.07 16 28 H 0.11 -0.09 5.21 -2.39 -0.01 -0.10 16 29 H 0.10 0.47 5.95 -2.39 -0.01 0.46 16 30 H 0.42 -1.35 7.38 -92.71 -0.68 -2.04 16 31 H 0.15 -0.28 8.06 -2.91 -0.02 -0.30 16 32 H 0.16 -0.73 8.06 -2.91 -0.02 -0.76 16 33 H 0.14 -0.19 8.06 -2.91 -0.02 -0.21 16 34 H 0.12 0.59 5.68 -2.91 -0.02 0.57 16 35 H 0.10 -0.37 8.11 -2.39 -0.02 -0.39 16 36 H 0.12 -0.29 6.93 -2.39 -0.02 -0.30 16 37 H 0.40 -3.66 9.12 -74.05 -0.68 -4.34 16 38 H 0.11 0.37 5.22 -2.39 -0.01 0.35 16 39 H 0.06 0.35 8.14 -2.39 -0.02 0.33 16 40 H 0.18 -1.08 7.45 -2.91 -0.02 -1.10 16 41 H 0.14 -0.24 7.96 -2.39 -0.02 -0.26 16 42 H 0.39 -1.15 8.30 -74.06 -0.61 -1.77 16 43 H -0.28 -2.19 7.11 99.48 0.71 -1.49 16 44 H -0.27 -2.29 7.11 99.48 0.71 -1.58 16 Total: 0.00 -16.26 368.83 -1.55 -17.81 By element: Atomic # 1 Polarization: -12.52 SS G_CDS: -0.82 Total: -13.34 kcal Atomic # 6 Polarization: 1.47 SS G_CDS: 4.41 Total: 5.87 kcal Atomic # 7 Polarization: -1.50 SS G_CDS: -3.51 Total: -5.00 kcal Atomic # 8 Polarization: -4.62 SS G_CDS: -3.49 Total: -8.11 kcal Atomic # 9 Polarization: -0.53 SS G_CDS: 0.58 Total: 0.05 kcal Atomic # 14 Polarization: 1.64 SS G_CDS: 1.86 Total: 3.50 kcal Atomic # 35 Polarization: -0.19 SS G_CDS: -0.58 Total: -0.77 kcal Total: -16.26 -1.55 -17.81 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_5000100.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.877 kcal (2) G-P(sol) polarization free energy of solvation -16.259 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.547 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds