Wall clock time and date at job start Tue Mar 9 2021 13:40:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47198 * 2 1 4 4 C 1.50699 * 109.47084 * 239.99442 * 2 1 3 5 5 C 1.35453 * 125.56257 * 120.02722 * 4 2 1 6 6 C 1.39834 * 107.86702 * 179.97438 * 5 4 2 7 7 C 1.37871 * 107.08173 * 359.97438 * 6 5 4 8 8 C 1.46684 * 126.22908 * 179.97438 * 7 6 5 9 9 O 1.21693 * 120.00134 * 0.03058 * 8 7 6 10 10 N 1.34777 * 119.99868 * 180.02562 * 8 7 6 11 11 C 1.46490 * 119.99966 * 180.02562 * 10 8 7 12 12 C 1.50708 * 112.84977 * 309.66528 * 11 10 8 13 13 C 1.38437 * 120.01160 * 169.08063 * 12 11 10 14 14 F 1.35099 * 120.02745 * 0.02562 * 13 12 11 15 15 C 1.38481 * 119.94410 * 180.27909 * 13 12 11 16 16 C 1.38183 * 119.97388 * 359.42064 * 15 13 12 17 17 C 1.38265 * 120.02323 * 0.30257 * 16 15 13 18 18 C 1.38214 * 120.00753 * 348.80537 * 12 11 10 19 19 C 1.53781 * 113.61691 * 178.47056 * 11 10 8 20 20 C 1.53785 * 87.08099 * 270.79743 * 19 11 10 21 21 H 1.08999 * 113.61246 * 219.93031 * 20 19 11 22 22 O 1.42903 * 113.61205 * 89.11128 * 20 19 11 23 23 C 1.53782 * 87.08094 * 334.56406 * 20 19 11 24 24 N 1.35527 * 125.56818 * 300.29324 * 4 2 1 25 25 H 0.96700 * 113.99945 * 60.00175 * 1 2 3 26 26 H 1.09009 * 109.47244 * 119.99873 * 2 1 3 27 27 H 1.48498 * 109.99812 * 298.67805 * 3 2 1 28 28 H 1.48494 * 110.00164 * 59.99751 * 3 2 1 29 29 H 1.08006 * 126.06444 * 359.97438 * 5 4 2 30 30 H 1.08001 * 126.45470 * 179.97438 * 6 5 4 31 31 H 0.96997 * 119.99547 * 0.02562 * 10 8 7 32 32 H 1.08002 * 120.01535 * 179.70304 * 15 13 12 33 33 H 1.07999 * 119.98736 * 180.27371 * 16 15 13 34 34 H 1.08004 * 119.96758 * 179.97438 * 17 16 15 35 35 H 1.08000 * 119.99561 * 359.97438 * 18 12 11 36 36 H 1.09002 * 113.61508 * 25.34350 * 19 11 10 37 37 H 1.08998 * 113.61783 * 156.16188 * 19 11 10 38 38 H 0.96699 * 113.99862 * 179.97438 * 22 20 19 39 39 H 1.08991 * 113.61395 * 270.88408 * 23 20 19 40 40 H 1.08997 * 113.61252 * 139.98043 * 23 20 19 41 41 H 0.97003 * 125.67651 * 0.07530 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7137 -0.1639 -2.1915 6 6 2.9578 -1.1463 -3.1562 7 6 2.3032 -2.2882 -2.7459 8 6 2.2798 -3.5746 -3.4504 9 8 2.8785 -3.7035 -4.5020 10 7 1.5952 -4.6139 -2.9330 11 6 1.5723 -5.8988 -3.6362 12 6 1.2024 -5.7632 -5.0909 13 6 1.3534 -6.8406 -5.9471 14 9 1.8320 -8.0141 -5.4792 15 6 1.0185 -6.7127 -7.2847 16 6 0.5227 -5.5139 -7.7607 17 6 0.3670 -4.4404 -6.9033 18 6 0.7068 -4.5650 -5.5693 19 6 0.7801 -6.9909 -2.8984 20 6 2.0928 -7.3486 -2.1815 21 1 2.2446 -8.4209 -2.0579 22 8 2.3033 -6.6153 -0.9732 23 6 2.8260 -6.7568 -3.3969 24 7 1.6698 -1.9992 -1.5585 25 1 -0.3933 0.4417 -0.7651 26 1 1.7924 -0.5138 0.8901 27 1 1.5879 2.4585 -1.2243 28 1 1.5615 2.4679 1.2084 29 1 3.0835 0.8507 -2.2095 30 1 3.5478 -1.0320 -4.0536 31 1 1.1178 -4.5111 -2.0949 32 1 1.1404 -7.5510 -7.9547 33 1 0.2573 -5.4153 -8.8029 34 1 -0.0202 -3.5038 -7.2765 35 1 0.5843 -3.7258 -4.9006 36 1 0.0118 -6.5984 -2.2322 37 1 0.4097 -7.7796 -3.5533 38 1 3.1271 -6.8362 -0.5175 39 1 3.0161 -7.4822 -4.1878 40 1 3.7093 -6.1752 -3.1332 41 1 1.1282 -2.6159 -1.0415 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_6580494.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:19 Heat of formation + Delta-G solvation = -34.585203 kcal Electronic energy + Delta-G solvation = -29400.596903 eV Core-core repulsion = 25164.201865 eV Total energy + Delta-G solvation = -4236.395039 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.121 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -50.03292 -42.63129 -41.73718 -39.40463 -39.31348 -37.88636 -36.32466 -34.12978 -32.18563 -31.95599 -31.27457 -31.23882 -27.20697 -27.05005 -25.74761 -23.83931 -23.39613 -22.52618 -21.63488 -21.08412 -20.59699 -19.93214 -18.76529 -18.31117 -18.13123 -17.58691 -17.01433 -16.82854 -16.68192 -16.56511 -16.34862 -15.98135 -15.57837 -15.33260 -15.18046 -15.01965 -14.82297 -14.58517 -14.33210 -14.09019 -13.97714 -13.81206 -13.74486 -13.57182 -13.46437 -12.91705 -12.49378 -12.38075 -12.33229 -11.92574 -11.89365 -11.69745 -11.20799 -10.93700 -10.84068 -10.21635 -10.07005 -9.76450 -9.52369 -9.25048 -4.98715 0.21322 0.30687 0.39847 1.10534 1.56247 1.59369 1.81516 1.90667 2.15262 2.37149 2.63826 2.89248 3.18201 3.30332 3.33245 3.45535 3.52827 3.55912 3.70591 3.78398 3.93971 4.07157 4.22157 4.24400 4.28564 4.36798 4.43271 4.43619 4.57455 4.57934 4.76946 4.86783 4.89233 4.97168 5.00823 5.08817 5.10659 5.12874 5.36041 5.49125 5.55589 5.61049 5.83321 5.95808 6.19086 6.23520 6.44374 6.52583 7.15245 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.062 4.062 3 Si 0.718 3.282 4 C 0.024 3.976 5 C -0.199 4.199 6 C -0.099 4.099 7 C -0.050 4.050 8 C 0.587 3.413 9 O -0.510 6.510 10 N -0.702 5.702 11 C 0.203 3.797 12 C -0.103 4.103 13 C 0.103 3.897 14 F -0.134 7.134 15 C -0.153 4.153 16 C -0.090 4.090 17 C -0.127 4.127 18 C -0.058 4.058 19 C -0.126 4.126 20 C 0.083 3.917 21 H 0.077 0.923 22 O -0.553 6.553 23 C -0.186 4.186 24 N -0.522 5.522 25 H 0.380 0.620 26 H 0.120 0.880 27 H -0.255 1.255 28 H -0.256 1.256 29 H 0.151 0.849 30 H 0.152 0.848 31 H 0.402 0.598 32 H 0.137 0.863 33 H 0.133 0.867 34 H 0.128 0.872 35 H 0.121 0.879 36 H 0.086 0.914 37 H 0.113 0.887 38 H 0.385 0.615 39 H 0.120 0.880 40 H 0.079 0.921 41 H 0.417 0.583 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.182 0.148 1.844 1.859 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.171 4.171 3 Si 0.616 3.384 4 C -0.095 4.095 5 C -0.224 4.224 6 C -0.125 4.125 7 C -0.163 4.163 8 C 0.375 3.625 9 O -0.385 6.385 10 N -0.353 5.353 11 C 0.116 3.884 12 C -0.105 4.105 13 C 0.083 3.917 14 F -0.113 7.113 15 C -0.171 4.171 16 C -0.108 4.108 17 C -0.146 4.146 18 C -0.076 4.076 19 C -0.164 4.164 20 C 0.023 3.977 21 H 0.095 0.905 22 O -0.359 6.359 23 C -0.224 4.224 24 N -0.118 5.118 25 H 0.228 0.772 26 H 0.138 0.862 27 H -0.179 1.179 28 H -0.180 1.180 29 H 0.168 0.832 30 H 0.170 0.830 31 H 0.237 0.763 32 H 0.155 0.845 33 H 0.151 0.849 34 H 0.146 0.854 35 H 0.139 0.861 36 H 0.104 0.896 37 H 0.131 0.869 38 H 0.233 0.767 39 H 0.138 0.862 40 H 0.098 0.902 41 H 0.255 0.745 Dipole moment (debyes) X Y Z Total from point charges -0.523 0.652 1.549 1.760 hybrid contribution -0.851 -0.913 0.329 1.291 sum -1.374 -0.261 1.878 2.341 Atomic orbital electron populations 1.86599 1.17614 1.80198 1.49662 1.24924 0.83991 1.11844 0.96341 0.94246 0.91428 0.72127 0.80561 1.21088 1.03665 0.85212 0.99503 1.20703 1.05139 1.00685 0.95832 1.21313 1.00500 0.90497 1.00184 1.20457 1.08050 0.96501 0.91337 1.17041 0.79054 0.81887 0.84557 1.90931 1.43271 1.82744 1.21539 1.45450 1.53591 1.10208 1.26074 1.19747 0.97787 0.83223 0.87677 1.19574 1.02445 0.93838 0.94652 1.17298 1.00578 0.81264 0.92536 1.91350 1.85547 1.45738 1.88645 1.21106 1.02591 0.99840 0.93598 1.21043 0.97558 0.92052 1.00193 1.21203 1.00694 0.99235 0.93428 1.20795 0.95353 0.95736 0.95755 1.23450 0.96765 0.97798 0.98357 1.22653 0.96016 0.94888 0.84110 0.90490 1.86358 1.45803 1.66615 1.37118 1.24499 0.97546 1.00170 1.00214 1.41966 1.39734 1.11177 1.18966 0.77205 0.86200 1.17898 1.18042 0.83152 0.83004 0.76279 0.84530 0.84904 0.85386 0.86081 0.89573 0.86863 0.76672 0.86198 0.90182 0.74510 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.20 12.88 -35.23 -0.45 -0.26 16 2 C -0.06 0.10 3.08 36.01 0.11 0.21 16 3 Si 0.72 -1.56 30.54 -169.99 -5.19 -6.75 16 4 C 0.02 -0.01 6.47 -81.95 -0.53 -0.55 16 5 C -0.20 0.02 9.32 -39.98 -0.37 -0.35 16 6 C -0.10 -0.15 10.65 -39.12 -0.42 -0.57 16 7 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 8 C 0.59 1.55 5.77 -12.85 -0.07 1.48 16 9 O -0.51 -3.00 14.35 5.20 0.07 -2.93 16 10 N -0.70 -0.42 4.34 -49.21 -0.21 -0.64 16 11 C 0.20 0.25 1.03 -132.16 -0.14 0.12 16 12 C -0.10 -0.28 4.52 -104.55 -0.47 -0.75 16 13 C 0.10 0.26 6.73 -39.42 -0.27 0.00 16 14 F -0.13 -0.29 12.95 2.25 0.03 -0.26 16 15 C -0.15 -0.24 10.03 -39.51 -0.40 -0.63 16 16 C -0.09 -0.09 10.04 -39.59 -0.40 -0.49 16 17 C -0.13 -0.22 10.04 -39.58 -0.40 -0.62 16 18 C -0.06 -0.16 7.51 -39.60 -0.30 -0.46 16 19 C -0.13 0.04 6.88 -25.92 -0.18 -0.14 16 20 C 0.08 -0.05 5.28 -25.92 -0.14 -0.19 16 21 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 22 O -0.55 0.52 12.96 -35.23 -0.46 0.06 16 23 C -0.19 -0.22 6.91 -25.91 -0.18 -0.40 16 24 N -0.52 0.32 5.99 -5.70 -0.03 0.29 16 25 H 0.38 -1.07 8.70 45.56 0.40 -0.68 16 26 H 0.12 -0.30 7.96 -51.92 -0.41 -0.71 16 27 H -0.25 0.01 7.11 56.52 0.40 0.41 16 28 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 29 H 0.15 -0.31 6.17 -52.48 -0.32 -0.63 16 30 H 0.15 0.21 8.06 -52.49 -0.42 -0.21 16 31 H 0.40 -0.44 7.60 -40.82 -0.31 -0.75 16 32 H 0.14 -0.04 8.06 -52.49 -0.42 -0.46 16 33 H 0.13 -0.17 8.06 -52.49 -0.42 -0.60 16 34 H 0.13 0.00 8.06 -52.48 -0.42 -0.43 16 35 H 0.12 0.33 5.78 -52.49 -0.30 0.03 16 36 H 0.09 -0.07 8.11 -51.93 -0.42 -0.49 16 37 H 0.11 -0.07 7.04 -51.93 -0.37 -0.44 16 38 H 0.39 -1.55 9.12 45.56 0.42 -1.14 16 39 H 0.12 0.19 5.11 -51.93 -0.27 -0.08 16 40 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 41 H 0.42 -0.98 8.19 -40.82 -0.33 -1.31 16 LS Contribution 341.85 15.07 5.15 5.15 Total: 0.00 -7.97 341.85 -9.47 -17.45 By element: Atomic # 1 Polarization: -4.47 SS G_CDS: -3.66 Total: -8.13 kcal Atomic # 6 Polarization: 0.73 SS G_CDS: -4.72 Total: -3.98 kcal Atomic # 7 Polarization: -0.10 SS G_CDS: -0.25 Total: -0.35 kcal Atomic # 8 Polarization: -2.29 SS G_CDS: -0.84 Total: -3.12 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.03 Total: -0.26 kcal Atomic # 14 Polarization: -1.56 SS G_CDS: -5.19 Total: -6.75 kcal Total LS contribution 5.15 Total: 5.15 kcal Total: -7.97 -9.47 -17.45 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_6580494.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.139 kcal (2) G-P(sol) polarization free energy of solvation -7.973 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.474 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.446 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.585 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds