Wall clock time and date at job start Tue Mar 9 2021 13:40:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35955 * 117.00586 * 2 1 4 4 C 1.39453 * 120.12346 * 180.02562 * 3 2 1 5 5 O 1.34775 * 133.24196 * 0.35644 * 4 3 2 6 6 C 1.34923 * 110.84077 * 180.02562 * 5 4 3 7 7 C 1.46992 * 125.13926 * 179.87733 * 6 5 4 8 8 O 1.21654 * 120.00060 * 179.70081 * 7 6 5 9 9 N 1.34784 * 119.99841 * 359.69776 * 7 6 5 10 10 C 1.46502 * 119.99764 * 179.97438 * 9 7 6 11 11 C 1.50696 * 112.84834 * 48.80839 * 10 9 7 12 12 C 1.38440 * 120.01469 * 191.19190 * 11 10 9 13 13 F 1.35106 * 120.02380 * 0.02846 * 12 11 10 14 14 C 1.38482 * 119.95200 * 180.02562 * 12 11 10 15 15 C 1.38174 * 119.97446 * 359.97438 * 14 12 11 16 16 C 1.38265 * 120.02249 * 0.02562 * 15 14 12 17 17 C 1.38219 * 120.05697 * 359.71918 * 16 15 14 18 18 C 1.53779 * 113.61564 * 277.49997 * 10 9 7 19 19 C 1.53784 * 87.08045 * 270.88599 * 18 10 9 20 20 H 1.09004 * 113.61451 * 220.02152 * 19 18 10 21 21 O 1.42896 * 113.61566 * 89.11454 * 19 18 10 22 22 C 1.53779 * 113.61301 * 179.97438 * 10 9 7 23 23 C 1.35803 * 109.72163 * 359.61624 * 6 5 4 24 24 C 1.40606 * 119.13598 * 180.02562 * 4 3 2 25 25 C 1.39774 * 120.12120 * 359.97438 * 24 4 3 26 26 C 1.50705 * 120.09430 * 179.97438 * 25 24 4 27 27 O 1.42904 * 109.46987 * 75.00177 * 26 25 24 28 28 Si 1.86300 * 109.47188 * 195.00279 * 26 25 24 29 29 C 1.36626 * 119.81584 * 0.02562 * 25 24 4 30 30 C 1.38260 * 120.12077 * 0.02562 * 3 2 1 31 31 H 1.09005 * 109.46892 * 59.99438 * 1 2 3 32 32 H 1.08998 * 109.47804 * 179.97438 * 1 2 3 33 33 H 1.09002 * 109.47005 * 300.00140 * 1 2 3 34 34 H 0.97000 * 119.99768 * 359.97438 * 9 7 6 35 35 H 1.07998 * 120.01219 * 179.97438 * 14 12 11 36 36 H 1.07997 * 119.98680 * 179.97438 * 15 14 12 37 37 H 1.08008 * 119.96995 * 179.97438 * 16 15 14 38 38 H 1.07993 * 119.99422 * 180.27994 * 17 16 15 39 39 H 1.09002 * 113.61557 * 156.33711 * 18 10 9 40 40 H 1.09004 * 113.61501 * 25.43131 * 18 10 9 41 41 H 0.96699 * 113.99840 * 82.49889 * 21 19 18 42 42 H 1.08997 * 113.61646 * 334.57319 * 22 10 9 43 43 H 1.09000 * 113.61527 * 203.66590 * 22 10 9 44 44 H 1.08006 * 126.95839 * 180.25668 * 23 6 5 45 45 H 1.08996 * 109.47184 * 315.00331 * 26 25 24 46 46 H 0.96698 * 113.99830 * 60.00197 * 27 26 25 47 47 H 1.48500 * 109.99834 * 180.02562 * 28 26 25 48 48 H 1.48502 * 109.99956 * 301.31919 * 28 26 25 49 49 H 1.08004 * 119.75723 * 179.97438 * 29 25 24 50 50 H 1.08001 * 119.66394 * 359.97438 * 30 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 3.4388 1.2872 -0.0005 5 8 4.4141 0.3570 -0.0072 6 6 5.6317 0.9383 -0.0038 7 6 6.9131 0.2180 -0.0067 8 8 7.9596 0.8383 -0.0087 9 7 6.9285 -1.1298 -0.0070 10 6 8.2056 -1.8476 -0.0104 11 6 9.1665 -1.3373 1.0323 12 6 10.4899 -1.7432 1.0123 13 9 10.9208 -2.5966 0.0576 14 6 11.3716 -1.2739 1.9714 15 6 10.9299 -0.4007 2.9469 16 6 9.6080 0.0040 2.9660 17 6 8.7281 -0.4596 2.0061 18 6 8.8292 -1.9889 -1.4089 19 6 8.0325 -3.2971 -1.5459 20 1 8.5889 -4.0983 -2.0323 21 8 6.7248 -3.1164 -2.0929 22 6 8.0521 -3.3777 -0.0096 23 6 5.4946 2.2894 -0.0032 24 6 4.0556 2.5507 0.0000 25 6 3.2768 3.7114 0.0006 26 6 3.9385 5.0654 0.0017 27 8 4.4614 5.3412 -1.2993 28 14 2.6867 6.3680 0.4569 29 6 1.9139 3.6150 0.0011 30 6 1.2959 2.3725 0.0005 31 1 -0.3633 0.5140 -0.8900 32 1 -0.3634 -1.0276 -0.0005 33 1 -0.3633 0.5139 0.8900 34 1 6.0941 -1.6243 -0.0050 35 1 12.4041 -1.5902 1.9569 36 1 11.6173 -0.0348 3.6953 37 1 9.2635 0.6863 3.7291 38 1 7.6969 -0.1393 2.0192 39 1 9.9092 -2.1350 -1.3927 40 1 8.5165 -1.2122 -2.1069 41 1 6.7060 -3.0649 -3.0584 42 1 7.1123 -3.7221 0.4218 43 1 8.9198 -3.9034 0.3889 44 1 6.2876 3.0226 -0.0046 45 1 4.7507 5.0722 0.7286 46 1 3.7928 5.3509 -1.9979 47 1 3.3268 7.7080 0.4610 48 1 1.5585 6.3475 -0.5084 49 1 1.3131 4.5125 0.0019 50 1 0.2175 2.3120 0.0005 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_6672420.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:22 Heat of formation + Delta-G solvation = -72.562740 kcal Electronic energy + Delta-G solvation = -40830.599337 eV Core-core repulsion = 35480.402956 eV Total energy + Delta-G solvation = -5350.196382 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.140 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -50.16171 -43.81408 -42.16193 -40.70904 -39.73005 -39.44092 -39.14439 -37.13494 -36.38543 -34.23265 -33.69422 -32.14983 -31.90515 -31.37149 -30.95629 -28.59066 -27.10261 -26.59528 -26.16612 -24.91690 -24.03429 -23.68795 -22.87093 -22.02598 -21.77660 -20.77055 -19.93643 -19.11935 -18.80810 -18.61564 -18.22895 -17.91637 -17.78871 -17.64658 -17.13684 -17.00417 -16.95136 -16.68680 -16.60059 -16.23188 -16.05029 -15.89947 -15.82825 -15.44054 -15.25642 -14.79173 -14.68865 -14.60183 -14.55729 -14.40253 -14.22476 -13.88613 -13.71996 -13.52970 -13.48400 -13.43613 -13.28052 -13.02781 -12.54759 -12.49096 -12.43019 -12.28204 -12.14062 -11.99318 -11.78749 -11.67239 -11.55473 -11.05495 -10.91872 -10.62293 -10.41691 -9.92262 -9.83372 -9.62992 -9.03821 -4.89610 -0.71364 0.07010 0.10010 0.21123 0.57705 1.12959 1.29338 1.59050 1.73727 1.82002 1.97463 2.11564 2.36499 2.53311 2.95411 3.09158 3.19251 3.28686 3.35396 3.39424 3.52444 3.55042 3.63228 3.68621 3.74633 3.81896 3.84413 3.95421 4.02900 4.14609 4.22786 4.29744 4.31645 4.37226 4.40697 4.41592 4.47890 4.56185 4.64161 4.71730 4.75100 4.78872 4.80604 4.81868 4.84062 4.85557 4.99124 5.01969 5.04139 5.18573 5.24961 5.31345 5.38627 5.42879 5.55706 5.86851 6.13551 6.25899 6.48511 6.74788 6.76127 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.334 6.334 3 C 0.137 3.863 4 C 0.021 3.979 5 O -0.182 6.182 6 C -0.033 4.033 7 C 0.600 3.400 8 O -0.525 6.525 9 N -0.676 5.676 10 C 0.190 3.810 11 C -0.117 4.117 12 C 0.090 3.910 13 F -0.134 7.134 14 C -0.157 4.157 15 C -0.090 4.090 16 C -0.135 4.135 17 C -0.075 4.075 18 C -0.188 4.188 19 C 0.091 3.909 20 H 0.096 0.904 21 O -0.563 6.563 22 C -0.120 4.120 23 C -0.110 4.110 24 C -0.095 4.095 25 C -0.099 4.099 26 C -0.090 4.090 27 O -0.548 6.548 28 Si 0.783 3.217 29 C -0.088 4.088 30 C -0.165 4.165 31 H 0.073 0.927 32 H 0.115 0.885 33 H 0.078 0.922 34 H 0.419 0.581 35 H 0.155 0.845 36 H 0.159 0.841 37 H 0.144 0.856 38 H 0.112 0.888 39 H 0.120 0.880 40 H 0.062 0.938 41 H 0.398 0.602 42 H 0.092 0.908 43 H 0.121 0.879 44 H 0.172 0.828 45 H 0.115 0.885 46 H 0.386 0.614 47 H -0.304 1.304 48 H -0.262 1.262 49 H 0.166 0.834 50 H 0.180 0.820 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.491 -1.176 2.647 7.108 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.248 6.248 3 C 0.091 3.909 4 C -0.027 4.027 5 O -0.084 6.084 6 C -0.083 4.083 7 C 0.386 3.614 8 O -0.403 6.403 9 N -0.326 5.326 10 C 0.103 3.897 11 C -0.119 4.119 12 C 0.070 3.930 13 F -0.113 7.113 14 C -0.176 4.176 15 C -0.108 4.108 16 C -0.153 4.153 17 C -0.094 4.094 18 C -0.227 4.227 19 C 0.032 3.968 20 H 0.114 0.886 21 O -0.371 6.371 22 C -0.157 4.157 23 C -0.130 4.130 24 C -0.096 4.096 25 C -0.100 4.100 26 C -0.197 4.197 27 O -0.356 6.356 28 Si 0.686 3.314 29 C -0.106 4.106 30 C -0.183 4.183 31 H 0.092 0.908 32 H 0.133 0.867 33 H 0.096 0.904 34 H 0.257 0.743 35 H 0.173 0.827 36 H 0.177 0.823 37 H 0.162 0.838 38 H 0.130 0.870 39 H 0.138 0.862 40 H 0.080 0.920 41 H 0.249 0.751 42 H 0.111 0.889 43 H 0.140 0.860 44 H 0.189 0.811 45 H 0.133 0.867 46 H 0.235 0.765 47 H -0.233 1.233 48 H -0.188 1.188 49 H 0.183 0.817 50 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -5.741 -0.590 3.292 6.644 hybrid contribution 0.083 -0.298 -2.133 2.156 sum -5.658 -0.888 1.159 5.843 Atomic orbital electron populations 1.23489 0.75294 1.06005 1.03196 1.86152 1.24348 1.25880 1.88416 1.18002 0.86103 0.86873 0.99928 1.19246 0.88274 0.87128 1.08066 1.84039 1.12777 1.35156 1.76433 1.21915 0.83900 0.92704 1.09821 1.16642 0.85313 0.82458 0.76964 1.90952 1.30761 1.68000 1.50605 1.45419 1.09437 1.04847 1.72909 1.20018 0.82687 0.92895 0.94056 1.19720 0.93121 1.00858 0.98182 1.17451 0.92180 0.93727 0.89593 1.91341 1.90120 1.68207 1.61598 1.21412 1.00776 1.00072 0.95328 1.21362 0.95979 0.95507 0.97940 1.21471 0.93998 1.00644 0.99172 1.20883 1.00059 0.94954 0.93487 1.24524 1.03182 0.99674 0.95292 1.22637 0.83932 0.95666 0.94552 0.88609 1.86374 1.27247 1.95758 1.27712 1.23470 1.05036 0.91495 0.95744 1.22818 0.95429 0.94174 1.00609 1.19557 0.92234 0.92760 1.05048 1.19553 0.93463 0.93845 1.03155 1.25404 1.07764 0.98628 0.87936 1.86608 1.38968 1.92770 1.17290 0.93886 0.75387 0.73406 0.88718 1.20890 0.92912 0.98814 0.97961 1.21377 1.01815 0.89546 1.05589 0.90812 0.86709 0.90372 0.74311 0.82718 0.82310 0.83840 0.86978 0.86226 0.91959 0.75149 0.88913 0.86046 0.81071 0.86716 0.76457 1.23271 1.18768 0.81667 0.80247 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.09 9.81 113.37 1.11 1.03 16 2 O -0.33 -1.17 10.50 -93.05 -0.98 -2.14 16 3 C 0.14 0.52 6.70 22.57 0.15 0.67 16 4 C 0.02 0.17 7.35 23.14 0.17 0.34 16 5 O -0.18 -1.85 10.28 -13.35 -0.14 -1.98 16 6 C -0.03 -0.33 7.07 24.00 0.17 -0.16 16 7 C 0.60 6.16 5.75 86.54 0.50 6.65 16 8 O -0.53 -7.88 14.08 -4.20 -0.06 -7.94 16 9 N -0.68 -4.33 4.39 -427.55 -1.88 -6.21 16 10 C 0.19 1.04 1.06 3.38 0.00 1.05 16 11 C -0.12 -0.89 4.52 -19.82 -0.09 -0.98 16 12 C 0.09 0.57 6.73 22.38 0.15 0.72 16 13 F -0.13 -0.71 12.95 44.97 0.58 -0.13 16 14 C -0.16 -0.53 10.03 22.31 0.22 -0.30 16 15 C -0.09 -0.18 10.04 22.26 0.22 0.05 16 16 C -0.13 -0.60 10.04 22.27 0.22 -0.37 16 17 C -0.08 -0.60 7.40 22.26 0.16 -0.43 16 18 C -0.19 -0.89 6.92 31.12 0.22 -0.68 16 19 C 0.09 0.04 5.28 31.14 0.16 0.20 16 20 H 0.10 -0.29 8.14 -2.39 -0.02 -0.31 16 21 O -0.56 -0.59 12.91 -148.98 -1.92 -2.52 16 22 C -0.12 -0.15 6.89 31.14 0.21 0.07 16 23 C -0.11 -0.98 10.68 23.79 0.25 -0.72 16 24 C -0.09 -0.65 6.16 -20.25 -0.12 -0.78 16 25 C -0.10 -0.16 5.26 -19.87 -0.10 -0.26 16 26 C -0.09 -0.04 2.71 71.24 0.19 0.16 16 27 O -0.55 -2.17 12.88 -148.98 -1.92 -4.09 16 28 Si 0.78 -2.97 30.25 68.60 2.08 -0.89 16 29 C -0.09 0.26 8.62 22.02 0.19 0.45 16 30 C -0.16 0.45 9.03 22.40 0.20 0.65 16 31 H 0.07 -0.67 7.66 -2.38 -0.02 -0.69 16 32 H 0.11 -0.97 8.14 -2.39 -0.02 -0.99 16 33 H 0.08 -0.76 7.66 -2.39 -0.02 -0.78 16 34 H 0.42 2.06 8.13 -92.71 -0.75 1.31 16 35 H 0.16 -0.16 8.06 -2.91 -0.02 -0.18 16 36 H 0.16 -0.61 8.06 -2.91 -0.02 -0.63 16 37 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 38 H 0.11 0.99 5.67 -2.91 -0.02 0.97 16 39 H 0.12 0.59 5.10 -2.39 -0.01 0.57 16 40 H 0.06 0.50 8.14 -2.39 -0.02 0.48 16 41 H 0.40 -2.24 9.12 -74.06 -0.68 -2.91 16 42 H 0.09 0.05 8.12 -2.39 -0.02 0.03 16 43 H 0.12 -0.04 7.07 -2.39 -0.02 -0.06 16 44 H 0.17 1.41 8.06 -2.91 -0.02 1.39 16 45 H 0.11 0.05 7.96 -2.39 -0.02 0.03 16 46 H 0.39 -0.94 8.70 -74.06 -0.64 -1.59 16 47 H -0.30 -1.41 7.11 99.48 0.71 -0.70 16 48 H -0.26 0.79 6.69 99.48 0.67 1.45 16 49 H 0.17 -1.37 4.81 -2.91 -0.01 -1.39 16 50 H 0.18 -1.76 6.26 -2.91 -0.02 -1.78 16 Total: 0.00 -23.24 413.02 -1.04 -24.28 By element: Atomic # 1 Polarization: -4.72 SS G_CDS: -1.01 Total: -5.72 kcal Atomic # 6 Polarization: 3.15 SS G_CDS: 4.21 Total: 7.36 kcal Atomic # 7 Polarization: -4.33 SS G_CDS: -1.88 Total: -6.21 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: -5.02 Total: -18.68 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.58 Total: -0.13 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: 2.08 Total: -0.89 kcal Total: -23.24 -1.04 -24.28 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_6672420.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -48.286 kcal (2) G-P(sol) polarization free energy of solvation -23.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.038 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.563 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds