Wall clock time and date at job start Tue Mar 9 2021 13:40:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33810 * 122.44875 * 2 1 4 4 C 1.50700 * 124.52303 * 0.02562 * 3 2 1 5 5 O 1.42896 * 109.47270 * 329.99739 * 4 3 2 6 6 Si 1.86308 * 109.47095 * 209.99634 * 4 3 2 7 7 S 1.70617 * 110.95507 * 179.97438 * 3 2 1 8 8 C 1.75827 * 91.56206 * 0.02562 * 7 3 2 9 9 C 1.46582 * 125.45747 * 180.02562 * 8 7 3 10 10 O 1.21697 * 120.00135 * 179.97438 * 9 8 7 11 11 N 1.34783 * 119.99902 * 359.97438 * 9 8 7 12 12 C 1.46497 * 119.99860 * 180.02562 * 11 9 8 13 13 C 1.50700 * 112.85468 * 48.80042 * 12 11 9 14 14 C 1.38430 * 120.02034 * 189.66775 * 13 12 11 15 15 F 1.35110 * 120.02149 * 359.97438 * 14 13 12 16 16 C 1.38482 * 119.95451 * 180.02562 * 14 13 12 17 17 C 1.38172 * 119.97084 * 359.97438 * 16 14 13 18 18 C 1.38268 * 120.02927 * 0.02562 * 17 16 14 19 19 C 1.38224 * 120.00561 * 9.39582 * 13 12 11 20 20 C 1.53785 * 113.61572 * 277.49998 * 12 11 9 21 21 C 1.53788 * 87.07740 * 270.88486 * 20 12 11 22 22 H 1.09003 * 113.69005 * 220.00809 * 21 20 12 23 23 O 1.42898 * 113.61506 * 89.11648 * 21 20 12 24 24 C 1.53779 * 113.61676 * 180.02562 * 12 11 9 25 25 C 1.36648 * 109.08409 * 359.73958 * 8 7 3 26 26 H 1.09002 * 109.47152 * 89.99865 * 1 2 3 27 27 H 1.09001 * 109.46980 * 329.99965 * 1 2 3 28 28 H 1.09004 * 109.47113 * 209.99946 * 1 2 3 29 29 H 1.09000 * 109.47798 * 89.99778 * 4 3 2 30 30 H 0.96701 * 114.00041 * 299.99959 * 5 4 3 31 31 H 1.48505 * 109.99673 * 58.68073 * 6 4 3 32 32 H 1.48503 * 109.99875 * 179.97438 * 6 4 3 33 33 H 0.96992 * 120.00033 * 0.02562 * 11 9 8 34 34 H 1.07996 * 120.01506 * 179.97438 * 16 14 13 35 35 H 1.07999 * 119.98965 * 179.97438 * 17 16 14 36 36 H 1.07996 * 119.97773 * 179.97438 * 18 17 16 37 37 H 1.07994 * 119.99169 * 359.97438 * 19 13 12 38 38 H 1.09001 * 113.61088 * 25.42534 * 20 12 11 39 39 H 1.08996 * 113.61773 * 156.34043 * 20 12 11 40 40 H 0.96702 * 114.00308 * 82.50283 * 23 21 20 41 41 H 1.08996 * 113.62058 * 203.66258 * 24 12 11 42 42 H 1.09003 * 113.61224 * 334.48427 * 24 12 11 43 43 H 1.07993 * 123.35210 * 180.23488 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.3751 2.4983 -0.6726 6 14 2.7922 3.6829 -0.8778 7 16 3.8969 0.7892 0.0007 8 6 3.5937 -0.9427 0.0002 9 6 4.6231 -1.9862 0.0010 10 8 4.3002 -3.1595 0.0011 11 7 5.9273 -1.6462 0.0017 12 6 6.9562 -2.6891 0.0020 13 6 6.7165 -3.7479 -1.0433 14 6 7.4782 -4.9038 -1.0455 15 9 8.4373 -5.0832 -0.1109 16 6 7.2572 -5.8757 -2.0070 17 6 6.2765 -5.6908 -2.9626 18 6 5.5163 -4.5359 -2.9595 19 6 5.7322 -3.5677 -1.9968 20 6 7.2572 -3.2572 1.3990 21 6 8.3095 -2.1444 1.5384 22 1 9.2297 -2.4700 2.0236 23 8 7.7910 -0.9319 2.0889 24 6 8.3919 -2.1382 0.0034 25 6 2.2446 -1.1601 0.0054 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 0.8900 0.5138 28 1 -0.3633 -0.8900 0.5138 29 1 1.4936 2.8503 1.0283 30 1 0.4256 2.2100 -1.5943 31 1 3.0188 3.2206 -2.2707 32 1 2.2219 5.0541 -0.8846 33 1 6.1847 -0.7110 0.0021 34 1 7.8511 -6.7776 -2.0099 35 1 6.1042 -6.4484 -3.7128 36 1 4.7502 -4.3921 -3.7070 37 1 5.1346 -2.6682 -1.9924 38 1 6.4259 -3.1618 2.0975 39 1 7.6827 -4.2605 1.3800 40 1 7.7368 -0.9298 3.0544 41 1 9.1276 -2.8354 -0.3972 42 1 8.4769 -1.1400 -0.4262 43 1 1.8019 -2.1451 0.0099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17639084_6739946.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:27 Heat of formation + Delta-G solvation = -48.421238 kcal Electronic energy + Delta-G solvation = -31186.382264 eV Core-core repulsion = 26820.201647 eV Total energy + Delta-G solvation = -4366.180616 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.098 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -49.99135 -42.05863 -40.28595 -39.40585 -39.31278 -37.44918 -36.25281 -34.03915 -32.25119 -31.71079 -31.24737 -30.27053 -27.03733 -26.97541 -25.56917 -24.46750 -23.55167 -22.77387 -21.76985 -20.68906 -20.13542 -19.46301 -18.68497 -18.23175 -17.83479 -17.46723 -17.30845 -16.89041 -16.75596 -16.57941 -16.51280 -16.07989 -15.90530 -15.51386 -15.22908 -15.04620 -14.72966 -14.57220 -14.41309 -14.15671 -13.92835 -13.77822 -13.69817 -13.50267 -13.44189 -13.11639 -13.03041 -12.86409 -12.45781 -12.41669 -12.30668 -12.22126 -11.86783 -11.83297 -11.65420 -11.09139 -10.92198 -10.83365 -10.18965 -9.75728 -9.63262 -9.49303 -9.40195 -5.21403 -0.61067 0.23563 0.30658 0.36559 0.72664 1.04327 1.33881 1.47108 1.80700 1.92106 2.17607 2.66473 2.94531 3.10935 3.32845 3.36321 3.47670 3.51576 3.58265 3.74327 3.78267 3.94920 4.08602 4.11995 4.26631 4.26998 4.39421 4.42993 4.46397 4.56988 4.61895 4.63167 4.76260 4.80994 4.84956 4.91031 4.92204 4.99368 5.02575 5.13009 5.15536 5.37854 5.39087 5.43661 5.52415 5.59477 5.98170 6.17665 6.40562 6.58688 7.14226 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.096 4.096 3 C -0.238 4.238 4 C -0.032 4.032 5 O -0.517 6.517 6 Si 0.662 3.338 7 S 0.208 5.792 8 C -0.262 4.262 9 C 0.589 3.411 10 O -0.512 6.512 11 N -0.696 5.696 12 C 0.202 3.798 13 C -0.104 4.104 14 C 0.104 3.896 15 F -0.135 7.135 16 C -0.154 4.154 17 C -0.090 4.090 18 C -0.130 4.130 19 C -0.055 4.055 20 C -0.185 4.185 21 C 0.083 3.917 22 H 0.077 0.923 23 O -0.550 6.550 24 C -0.126 4.126 25 C -0.048 4.048 26 H 0.069 0.931 27 H 0.084 0.916 28 H 0.063 0.937 29 H 0.129 0.871 30 H 0.378 0.622 31 H -0.247 1.247 32 H -0.237 1.237 33 H 0.407 0.593 34 H 0.136 0.864 35 H 0.132 0.868 36 H 0.127 0.873 37 H 0.122 0.878 38 H 0.079 0.921 39 H 0.118 0.882 40 H 0.385 0.615 41 H 0.113 0.887 42 H 0.088 0.912 43 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.454 2.448 -0.120 3.469 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.109 4.109 3 C -0.357 4.357 4 C -0.144 4.144 5 O -0.324 6.324 6 Si 0.560 3.440 7 S 0.477 5.523 8 C -0.382 4.382 9 C 0.375 3.625 10 O -0.389 6.389 11 N -0.348 5.348 12 C 0.115 3.885 13 C -0.106 4.106 14 C 0.084 3.916 15 F -0.113 7.113 16 C -0.173 4.173 17 C -0.108 4.108 18 C -0.148 4.148 19 C -0.073 4.073 20 C -0.223 4.223 21 C 0.024 3.976 22 H 0.095 0.905 23 O -0.357 6.357 24 C -0.164 4.164 25 C -0.081 4.081 26 H 0.087 0.913 27 H 0.103 0.897 28 H 0.082 0.918 29 H 0.146 0.854 30 H 0.227 0.773 31 H -0.171 1.171 32 H -0.161 1.161 33 H 0.243 0.757 34 H 0.154 0.846 35 H 0.150 0.850 36 H 0.145 0.855 37 H 0.140 0.860 38 H 0.098 0.902 39 H 0.136 0.864 40 H 0.233 0.767 41 H 0.132 0.868 42 H 0.107 0.893 43 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 3.467 3.459 -0.810 4.964 hybrid contribution -1.961 -1.204 0.111 2.304 sum 1.506 2.254 -0.698 2.800 Atomic orbital electron populations 1.20635 0.88747 1.03406 1.02626 1.18692 0.98347 0.90629 1.03201 1.24455 0.98906 1.00700 1.11640 1.24420 0.91181 0.95226 1.03528 1.86638 1.27529 1.89221 1.29034 0.95457 0.84994 0.80024 0.83570 1.82800 1.02536 0.98417 1.68571 1.24595 0.97846 0.96968 1.18815 1.16906 0.81490 0.87599 0.76475 1.90924 1.81469 1.17778 1.48681 1.45415 1.04308 1.09528 1.75554 1.19770 0.87923 0.86982 0.93863 1.19562 0.98179 0.94876 0.98010 1.17295 0.89594 0.95176 0.89525 1.91371 1.61527 1.95450 1.62985 1.21090 1.00970 0.99372 0.95877 1.21032 0.94462 0.97503 0.97808 1.21198 1.00188 0.94236 0.99169 1.20851 0.94684 0.99303 0.92439 1.24463 1.00488 1.01300 0.96051 1.22633 0.95605 0.84877 0.94521 0.90477 1.86378 1.86984 1.36029 1.26263 1.23447 0.94511 1.03093 0.95345 1.20692 0.90863 1.00054 0.96515 0.91277 0.89708 0.91839 0.85378 0.77342 1.17051 1.16067 0.75663 0.84572 0.84974 0.85469 0.85984 0.90190 0.86450 0.76673 0.86834 0.89336 0.82849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.03 8.68 36.01 0.31 0.35 16 2 C -0.10 -0.05 5.75 -106.45 -0.61 -0.67 16 3 C -0.24 0.08 5.53 -35.86 -0.20 -0.12 16 4 C -0.03 0.04 2.76 36.01 0.10 0.14 16 5 O -0.52 0.27 9.85 -35.23 -0.35 -0.08 16 6 Si 0.66 -1.07 31.31 -169.99 -5.32 -6.40 16 7 S 0.21 -0.21 19.80 -107.50 -2.13 -2.34 16 8 C -0.26 -0.39 6.45 -36.79 -0.24 -0.63 16 9 C 0.59 1.67 5.70 -12.89 -0.07 1.60 16 10 O -0.51 -3.02 14.01 5.19 0.07 -2.95 16 11 N -0.70 -0.71 4.42 -49.25 -0.22 -0.92 16 12 C 0.20 0.28 1.07 -132.16 -0.14 0.13 16 13 C -0.10 -0.29 4.57 -104.56 -0.48 -0.76 16 14 C 0.10 0.26 6.72 -39.42 -0.26 0.00 16 15 F -0.13 -0.28 12.93 2.25 0.03 -0.25 16 16 C -0.15 -0.24 10.03 -39.52 -0.40 -0.64 16 17 C -0.09 -0.10 10.04 -39.59 -0.40 -0.49 16 18 C -0.13 -0.24 10.05 -39.57 -0.40 -0.63 16 19 C -0.05 -0.16 7.38 -39.59 -0.29 -0.45 16 20 C -0.18 -0.21 6.92 -25.91 -0.18 -0.39 16 21 C 0.08 -0.07 5.28 -25.95 -0.14 -0.20 16 22 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 23 O -0.55 0.62 12.91 -35.23 -0.45 0.17 16 24 C -0.13 0.05 6.87 -25.95 -0.18 -0.13 16 25 C -0.05 -0.08 9.79 -40.44 -0.40 -0.47 16 26 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 27 H 0.08 0.02 6.41 -51.93 -0.33 -0.32 16 28 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 29 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 30 H 0.38 -1.09 8.66 45.56 0.39 -0.69 16 31 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 32 H -0.24 -0.26 7.11 56.52 0.40 0.14 16 33 H 0.41 -0.20 7.53 -40.82 -0.31 -0.50 16 34 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 35 H 0.13 -0.16 8.06 -52.49 -0.42 -0.59 16 36 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 37 H 0.12 0.36 5.53 -52.49 -0.29 0.07 16 38 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 39 H 0.12 0.17 5.22 -51.93 -0.27 -0.10 16 40 H 0.39 -1.68 9.12 45.56 0.42 -1.26 16 41 H 0.11 -0.09 6.93 -51.93 -0.36 -0.45 16 42 H 0.09 -0.09 8.12 -51.93 -0.42 -0.51 16 43 H 0.15 0.25 8.06 -52.49 -0.42 -0.17 16 LS Contribution 363.30 15.07 5.47 5.47 Total: 0.00 -7.05 363.30 -11.03 -18.08 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -4.17 Total: -7.42 kcal Atomic # 6 Polarization: 0.60 SS G_CDS: -3.97 Total: -3.37 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -0.22 Total: -0.92 kcal Atomic # 8 Polarization: -2.12 SS G_CDS: -0.73 Total: -2.85 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.03 Total: -0.25 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.32 Total: -6.40 kcal Atomic # 16 Polarization: -0.21 SS G_CDS: -2.13 Total: -2.34 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -7.05 -11.03 -18.08 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_6739946.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.340 kcal (2) G-P(sol) polarization free energy of solvation -7.054 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.082 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.421 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds