Wall clock time and date at job start Tue Mar 9 2021 13:40:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33810 * 122.44875 * 2 1 4 4 C 1.50700 * 124.52303 * 0.02562 * 3 2 1 5 5 O 1.42896 * 109.47270 * 329.99739 * 4 3 2 6 6 Si 1.86308 * 109.47095 * 209.99634 * 4 3 2 7 7 S 1.70617 * 110.95507 * 179.97438 * 3 2 1 8 8 C 1.75827 * 91.56206 * 0.02562 * 7 3 2 9 9 C 1.46582 * 125.45747 * 180.02562 * 8 7 3 10 10 O 1.21697 * 120.00135 * 179.97438 * 9 8 7 11 11 N 1.34783 * 119.99902 * 359.97438 * 9 8 7 12 12 C 1.46497 * 119.99860 * 180.02562 * 11 9 8 13 13 C 1.50700 * 112.85468 * 48.80042 * 12 11 9 14 14 C 1.38430 * 120.02034 * 189.66775 * 13 12 11 15 15 F 1.35110 * 120.02149 * 359.97438 * 14 13 12 16 16 C 1.38482 * 119.95451 * 180.02562 * 14 13 12 17 17 C 1.38172 * 119.97084 * 359.97438 * 16 14 13 18 18 C 1.38268 * 120.02927 * 0.02562 * 17 16 14 19 19 C 1.38224 * 120.00561 * 9.39582 * 13 12 11 20 20 C 1.53785 * 113.61572 * 277.49998 * 12 11 9 21 21 C 1.53788 * 87.07740 * 270.88486 * 20 12 11 22 22 H 1.09003 * 113.69005 * 220.00809 * 21 20 12 23 23 O 1.42898 * 113.61506 * 89.11648 * 21 20 12 24 24 C 1.53779 * 113.61676 * 180.02562 * 12 11 9 25 25 C 1.36648 * 109.08409 * 359.73958 * 8 7 3 26 26 H 1.09002 * 109.47152 * 89.99865 * 1 2 3 27 27 H 1.09001 * 109.46980 * 329.99965 * 1 2 3 28 28 H 1.09004 * 109.47113 * 209.99946 * 1 2 3 29 29 H 1.09000 * 109.47798 * 89.99778 * 4 3 2 30 30 H 0.96701 * 114.00041 * 299.99959 * 5 4 3 31 31 H 1.48505 * 109.99673 * 58.68073 * 6 4 3 32 32 H 1.48503 * 109.99875 * 179.97438 * 6 4 3 33 33 H 0.96992 * 120.00033 * 0.02562 * 11 9 8 34 34 H 1.07996 * 120.01506 * 179.97438 * 16 14 13 35 35 H 1.07999 * 119.98965 * 179.97438 * 17 16 14 36 36 H 1.07996 * 119.97773 * 179.97438 * 18 17 16 37 37 H 1.07994 * 119.99169 * 359.97438 * 19 13 12 38 38 H 1.09001 * 113.61088 * 25.42534 * 20 12 11 39 39 H 1.08996 * 113.61773 * 156.34043 * 20 12 11 40 40 H 0.96702 * 114.00308 * 82.50283 * 23 21 20 41 41 H 1.08996 * 113.62058 * 203.66258 * 24 12 11 42 42 H 1.09003 * 113.61224 * 334.48427 * 24 12 11 43 43 H 1.07993 * 123.35210 * 180.23488 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1292 0.0000 4 6 1.6355 2.5161 0.0006 5 8 0.3751 2.4983 -0.6726 6 14 2.7922 3.6829 -0.8778 7 16 3.8969 0.7892 0.0007 8 6 3.5937 -0.9427 0.0002 9 6 4.6231 -1.9862 0.0010 10 8 4.3002 -3.1595 0.0011 11 7 5.9273 -1.6462 0.0017 12 6 6.9562 -2.6891 0.0020 13 6 6.7165 -3.7479 -1.0433 14 6 7.4782 -4.9038 -1.0455 15 9 8.4373 -5.0832 -0.1109 16 6 7.2572 -5.8757 -2.0070 17 6 6.2765 -5.6908 -2.9626 18 6 5.5163 -4.5359 -2.9595 19 6 5.7322 -3.5677 -1.9968 20 6 7.2572 -3.2572 1.3990 21 6 8.3095 -2.1444 1.5384 22 1 9.2297 -2.4700 2.0236 23 8 7.7910 -0.9319 2.0889 24 6 8.3919 -2.1382 0.0034 25 6 2.2446 -1.1601 0.0054 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 0.8900 0.5138 28 1 -0.3633 -0.8900 0.5138 29 1 1.4936 2.8503 1.0283 30 1 0.4256 2.2100 -1.5943 31 1 3.0188 3.2206 -2.2707 32 1 2.2219 5.0541 -0.8846 33 1 6.1847 -0.7110 0.0021 34 1 7.8511 -6.7776 -2.0099 35 1 6.1042 -6.4484 -3.7128 36 1 4.7502 -4.3921 -3.7070 37 1 5.1346 -2.6682 -1.9924 38 1 6.4259 -3.1618 2.0975 39 1 7.6827 -4.2605 1.3800 40 1 7.7368 -0.9298 3.0544 41 1 9.1276 -2.8354 -0.3972 42 1 8.4769 -1.1400 -0.4262 43 1 1.8019 -2.1451 0.0099 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17639084_6739946.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:40:26 Heat of formation + Delta-G solvation = -46.234868 kcal Electronic energy + Delta-G solvation = -31186.287456 eV Core-core repulsion = 26820.201647 eV Total energy + Delta-G solvation = -4366.085808 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.098 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -50.12345 -42.15173 -40.31662 -39.46284 -39.40518 -37.43003 -36.24211 -34.16214 -32.29896 -31.77394 -31.34781 -30.24399 -27.08853 -27.00059 -25.58649 -24.49823 -23.66883 -22.83094 -21.83237 -20.77061 -20.14110 -19.50814 -18.76989 -18.19323 -17.86648 -17.51553 -17.35326 -16.98471 -16.86527 -16.66195 -16.50422 -16.17461 -15.95895 -15.55206 -15.26343 -15.08634 -14.77838 -14.60892 -14.45367 -14.26219 -13.92625 -13.85183 -13.68143 -13.51278 -13.44856 -13.13006 -13.06717 -12.92473 -12.51498 -12.43896 -12.35402 -12.22736 -11.93956 -11.82988 -11.65016 -11.27066 -10.88963 -10.83666 -10.31083 -9.85458 -9.68738 -9.59216 -9.38423 -5.12075 -0.67239 0.12017 0.23504 0.30628 0.71814 1.06746 1.31376 1.53298 1.82991 1.86383 2.03589 2.55681 3.03710 3.21349 3.23058 3.33431 3.43633 3.51620 3.58509 3.70001 3.75135 3.89508 4.03948 4.09450 4.27045 4.27771 4.32204 4.40505 4.49309 4.56249 4.61433 4.70547 4.78722 4.80916 4.82367 4.85554 4.88010 4.91578 4.99230 5.01290 5.07428 5.29790 5.36929 5.42306 5.43279 5.49095 5.88670 6.31717 6.35748 6.83703 7.00852 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.108 4.108 3 C -0.237 4.237 4 C -0.036 4.036 5 O -0.529 6.529 6 Si 0.733 3.267 7 S 0.261 5.739 8 C -0.286 4.286 9 C 0.589 3.411 10 O -0.550 6.550 11 N -0.685 5.685 12 C 0.191 3.809 13 C -0.115 4.115 14 C 0.088 3.912 15 F -0.135 7.135 16 C -0.160 4.160 17 C -0.092 4.092 18 C -0.139 4.139 19 C -0.071 4.071 20 C -0.187 4.187 21 C 0.095 3.905 22 H 0.093 0.907 23 O -0.558 6.558 24 C -0.122 4.122 25 C -0.057 4.057 26 H 0.076 0.924 27 H 0.081 0.919 28 H 0.061 0.939 29 H 0.141 0.859 30 H 0.387 0.613 31 H -0.274 1.274 32 H -0.274 1.274 33 H 0.414 0.586 34 H 0.153 0.847 35 H 0.157 0.843 36 H 0.141 0.859 37 H 0.116 0.884 38 H 0.062 0.938 39 H 0.112 0.888 40 H 0.399 0.601 41 H 0.117 0.883 42 H 0.097 0.903 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.227 3.280 -0.139 4.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.120 4.120 3 C -0.357 4.357 4 C -0.147 4.147 5 O -0.337 6.337 6 Si 0.634 3.366 7 S 0.530 5.470 8 C -0.405 4.405 9 C 0.376 3.624 10 O -0.430 6.430 11 N -0.337 5.337 12 C 0.104 3.896 13 C -0.116 4.116 14 C 0.069 3.931 15 F -0.114 7.114 16 C -0.179 4.179 17 C -0.110 4.110 18 C -0.157 4.157 19 C -0.090 4.090 20 C -0.226 4.226 21 C 0.035 3.965 22 H 0.111 0.889 23 O -0.367 6.367 24 C -0.159 4.159 25 C -0.091 4.091 26 H 0.094 0.906 27 H 0.100 0.900 28 H 0.080 0.920 29 H 0.159 0.841 30 H 0.237 0.763 31 H -0.200 1.200 32 H -0.199 1.199 33 H 0.252 0.748 34 H 0.171 0.829 35 H 0.174 0.826 36 H 0.158 0.842 37 H 0.133 0.867 38 H 0.081 0.919 39 H 0.130 0.870 40 H 0.250 0.750 41 H 0.135 0.865 42 H 0.115 0.885 43 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 4.261 4.303 -0.807 6.110 hybrid contribution -2.239 -1.409 0.093 2.647 sum 2.022 2.894 -0.714 3.602 Atomic orbital electron populations 1.20605 0.88260 1.03130 1.03017 1.18732 0.98805 0.90502 1.04000 1.24691 0.99528 1.00952 1.10551 1.24621 0.91108 0.94570 1.04418 1.86619 1.27921 1.89234 1.29936 0.94668 0.83564 0.76911 0.81409 1.82547 1.01470 0.95825 1.67134 1.24603 0.97559 0.98488 1.19896 1.17096 0.82096 0.87371 0.75806 1.90892 1.82073 1.19373 1.50646 1.45330 1.03810 1.09911 1.74641 1.19952 0.88869 0.87097 0.93664 1.19750 0.98177 0.95449 0.98263 1.17474 0.89991 0.95599 0.90055 1.91362 1.61488 1.95468 1.63046 1.21390 1.01190 0.99720 0.95580 1.21333 0.93870 0.97690 0.98107 1.21461 1.00630 0.94352 0.99251 1.20926 0.95091 0.99673 0.93269 1.24453 1.00640 1.01906 0.95603 1.22554 0.95297 0.84192 0.94434 0.88877 1.86340 1.86972 1.35613 1.27747 1.23449 0.93156 1.03461 0.95841 1.20717 0.91209 1.00140 0.97028 0.90585 0.89991 0.92016 0.84134 0.76258 1.19957 1.19934 0.74796 0.82903 0.82564 0.84157 0.86659 0.91938 0.87039 0.75017 0.86505 0.88485 0.83871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.03 8.68 71.24 0.62 0.65 16 2 C -0.11 -0.17 5.75 -21.05 -0.12 -0.29 16 3 C -0.24 0.25 5.53 24.68 0.14 0.38 16 4 C -0.04 0.12 2.76 71.24 0.20 0.32 16 5 O -0.53 0.82 9.85 -148.98 -1.47 -0.65 16 6 Si 0.73 -2.82 31.31 68.60 2.15 -0.67 16 7 S 0.26 -0.64 19.80 -56.49 -1.12 -1.76 16 8 C -0.29 -1.14 6.45 24.08 0.16 -0.99 16 9 C 0.59 4.28 5.70 86.42 0.49 4.77 16 10 O -0.55 -7.83 14.01 -4.34 -0.06 -7.89 16 11 N -0.69 -2.01 4.42 -427.93 -1.89 -3.90 16 12 C 0.19 0.70 1.07 3.39 0.00 0.71 16 13 C -0.11 -0.78 4.57 -19.82 -0.09 -0.87 16 14 C 0.09 0.53 6.72 22.37 0.15 0.68 16 15 F -0.14 -0.67 12.93 44.97 0.58 -0.09 16 16 C -0.16 -0.55 10.03 22.31 0.22 -0.33 16 17 C -0.09 -0.21 10.04 22.26 0.22 0.02 16 18 C -0.14 -0.62 10.05 22.28 0.22 -0.40 16 19 C -0.07 -0.53 7.38 22.27 0.16 -0.36 16 20 C -0.19 -0.61 6.92 31.12 0.22 -0.40 16 21 C 0.09 -0.18 5.28 31.10 0.16 -0.02 16 22 H 0.09 -0.46 8.14 -2.39 -0.02 -0.48 16 23 O -0.56 1.68 12.91 -148.98 -1.92 -0.24 16 24 C -0.12 0.11 6.87 31.10 0.21 0.32 16 25 C -0.06 -0.26 9.79 21.72 0.21 -0.05 16 26 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 27 H 0.08 0.03 6.41 -2.39 -0.02 0.02 16 28 H 0.06 -0.01 8.13 -2.38 -0.02 -0.03 16 29 H 0.14 -0.78 7.96 -2.39 -0.02 -0.79 16 30 H 0.39 -2.37 8.66 -74.06 -0.64 -3.01 16 31 H -0.27 -0.21 7.11 99.48 0.71 0.49 16 32 H -0.27 -0.66 7.11 99.48 0.71 0.05 16 33 H 0.41 -0.34 7.53 -92.71 -0.70 -1.04 16 34 H 0.15 -0.12 8.06 -2.91 -0.02 -0.14 16 35 H 0.16 -0.52 8.06 -2.91 -0.02 -0.55 16 36 H 0.14 0.11 8.06 -2.91 -0.02 0.09 16 37 H 0.12 0.91 5.53 -2.91 -0.02 0.89 16 38 H 0.06 0.41 8.14 -2.39 -0.02 0.39 16 39 H 0.11 0.47 5.22 -2.39 -0.01 0.46 16 40 H 0.40 -3.81 9.12 -74.06 -0.68 -4.48 16 41 H 0.12 -0.18 6.93 -2.39 -0.02 -0.20 16 42 H 0.10 -0.26 8.12 -2.39 -0.02 -0.28 16 43 H 0.14 0.83 8.06 -2.91 -0.02 0.80 16 Total: 0.00 -17.62 363.30 -1.42 -19.04 By element: Atomic # 1 Polarization: -7.10 SS G_CDS: -0.87 Total: -7.97 kcal Atomic # 6 Polarization: 0.97 SS G_CDS: 3.18 Total: 4.15 kcal Atomic # 7 Polarization: -2.01 SS G_CDS: -1.89 Total: -3.90 kcal Atomic # 8 Polarization: -5.34 SS G_CDS: -3.45 Total: -8.79 kcal Atomic # 9 Polarization: -0.67 SS G_CDS: 0.58 Total: -0.09 kcal Atomic # 14 Polarization: -2.82 SS G_CDS: 2.15 Total: -0.67 kcal Atomic # 16 Polarization: -0.64 SS G_CDS: -1.12 Total: -1.76 kcal Total: -17.62 -1.42 -19.04 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17639084_6739946.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.199 kcal (2) G-P(sol) polarization free energy of solvation -17.616 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.815 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.420 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.036 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds