Wall clock time and date at job start Tue Mar 9 2021 13:41:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.52998 * 109.47448 * 2 1 4 4 C 1.52999 * 109.47192 * 120.00063 * 2 1 3 5 5 C 1.53007 * 109.47351 * 239.99923 * 2 1 3 6 6 H 1.08997 * 112.85007 * 187.47640 * 5 2 1 7 7 C 1.53778 * 113.61267 * 318.78741 * 5 2 1 8 8 C 1.53778 * 87.08158 * 139.97531 * 7 5 2 9 9 H 1.09004 * 113.69502 * 220.00210 * 8 7 5 10 10 N 1.46508 * 113.61190 * 89.11555 * 8 7 5 11 11 C 1.34776 * 120.00116 * 107.50266 * 10 8 7 12 12 O 1.21574 * 119.99969 * 359.97438 * 11 10 8 13 13 C 1.47683 * 120.00185 * 179.97438 * 11 10 8 14 14 C 1.39827 * 120.16969 * 180.02562 * 13 11 10 15 15 F 1.35095 * 120.10736 * 0.02562 * 14 13 11 16 16 C 1.38322 * 119.77885 * 180.02562 * 14 13 11 17 17 C 1.38197 * 120.11765 * 359.97438 * 16 14 13 18 18 C 1.38454 * 120.34189 * 0.02562 * 17 16 14 19 19 C 1.50704 * 119.89254 * 179.97438 * 18 17 16 20 20 O 1.42898 * 109.47292 * 119.99409 * 19 18 17 21 21 Si 1.86304 * 109.47047 * 359.97438 * 19 18 17 22 22 C 1.37855 * 120.21906 * 359.71443 * 18 17 16 23 23 C 1.53775 * 87.08351 * 334.56760 * 8 7 5 24 24 H 1.09001 * 109.47367 * 66.50668 * 1 2 3 25 25 H 1.09004 * 109.46962 * 306.50565 * 1 2 3 26 26 H 1.08999 * 109.47237 * 186.50875 * 1 2 3 27 27 H 1.09008 * 109.46982 * 59.99951 * 3 2 1 28 28 H 1.09000 * 109.47609 * 180.02562 * 3 2 1 29 29 H 1.08996 * 109.47147 * 300.00122 * 3 2 1 30 30 H 1.09007 * 109.47393 * 59.99847 * 4 2 1 31 31 H 1.09009 * 109.47358 * 179.97438 * 4 2 1 32 32 H 1.08998 * 109.47209 * 299.99909 * 4 2 1 33 33 H 1.09003 * 113.61531 * 254.52879 * 7 5 2 34 34 H 1.08997 * 113.61603 * 25.42764 * 7 5 2 35 35 H 0.96999 * 119.99781 * 287.49756 * 10 8 7 36 36 H 1.08000 * 119.93565 * 179.97438 * 16 14 13 37 37 H 1.08008 * 119.82700 * 180.02562 * 17 16 14 38 38 H 1.09003 * 109.47291 * 239.99895 * 19 18 17 39 39 H 0.96699 * 114.00154 * 300.00786 * 20 19 18 40 40 H 1.48496 * 109.99984 * 58.68088 * 21 19 18 41 41 H 1.48492 * 110.00286 * 180.02562 * 21 19 18 42 42 H 1.07997 * 120.06161 * 180.30116 * 22 18 17 43 43 H 1.09002 * 113.61282 * 270.88787 * 23 8 7 44 44 H 1.08996 * 113.69385 * 139.98770 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 1.2492 5 6 2.0400 -0.7213 -1.2493 6 1 3.1201 -0.8680 -1.2420 7 6 1.2460 -1.9923 -1.5940 8 6 1.3663 -1.5727 -3.0686 9 1 0.4598 -1.7460 -3.6486 10 7 2.5702 -2.0847 -3.7281 11 6 2.4715 -3.0766 -4.6353 12 8 1.3835 -3.5467 -4.9060 13 6 3.6850 -3.5923 -5.3005 14 6 3.5866 -4.6208 -6.2426 15 9 2.3804 -5.1466 -6.5484 16 6 4.7285 -5.0981 -6.8604 17 6 5.9625 -4.5599 -6.5480 18 6 6.0656 -3.5414 -5.6158 19 6 7.4164 -2.9623 -5.2824 20 8 7.4251 -1.5665 -5.5886 21 14 8.7272 -3.8267 -6.2851 22 6 4.9361 -3.0515 -4.9956 23 6 1.5079 -0.1270 -2.5640 24 1 -0.3634 0.4097 -0.9425 25 1 -0.3633 0.6114 0.8261 26 1 -0.3634 -1.0210 0.1165 27 1 1.6767 1.9563 0.8900 28 1 3.1300 1.4425 -0.0005 29 1 1.6767 1.9563 -0.8899 30 1 1.6766 -1.7490 1.2493 31 1 3.1301 -0.7217 1.2490 32 1 1.6767 -0.2074 2.1392 33 1 1.7756 -2.9154 -1.3581 34 1 0.2225 -1.9828 -1.2195 35 1 3.4383 -1.7098 -3.5118 36 1 4.6555 -5.8927 -7.5881 37 1 6.8510 -4.9359 -7.0335 38 1 7.6199 -3.1027 -4.2208 39 1 7.2506 -1.3668 -6.5185 40 1 8.4438 -3.6702 -7.7343 41 1 10.0642 -3.2653 -5.9650 42 1 5.0189 -2.2536 -4.2725 43 1 0.5559 0.3924 -2.4546 44 1 2.2484 0.4570 -3.1104 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17664192_12335834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:06 Heat of formation + Delta-G solvation = -62.522921 kcal Electronic energy + Delta-G solvation = -25839.998086 eV Core-core repulsion = 22060.102864 eV Total energy + Delta-G solvation = -3779.895223 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 308.157 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.03659 -41.80820 -40.75453 -39.66770 -37.59723 -36.58299 -34.16776 -32.45875 -32.12508 -28.46396 -28.20716 -26.66653 -26.46770 -26.25184 -25.10153 -23.22920 -21.73462 -21.22064 -19.28996 -19.11161 -18.38296 -18.32490 -17.38588 -17.01309 -16.90458 -16.37841 -16.21726 -16.12824 -15.88465 -15.73815 -15.53323 -15.09901 -14.81544 -14.59776 -14.41015 -14.22300 -13.81187 -13.59953 -13.53249 -13.29891 -13.14724 -12.85610 -12.78603 -12.70346 -12.40434 -12.30694 -12.03005 -11.86839 -11.74870 -11.38721 -11.19139 -11.12436 -10.89232 -10.65486 -10.42568 -10.10857 -9.84433 -4.88362 -0.52394 -0.05114 1.30559 1.57076 1.63326 1.89219 2.01699 2.44591 3.02703 3.30774 3.42917 3.49988 3.50688 3.54243 3.61393 3.74909 3.84253 3.98490 4.07135 4.08415 4.25446 4.28846 4.46122 4.53715 4.59574 4.69232 4.72959 4.76383 4.78535 4.79412 4.82490 4.85315 4.93387 4.95879 4.98323 5.02930 5.11447 5.12515 5.14036 5.21558 5.23282 5.40297 5.44296 5.51130 5.57825 5.65982 6.32453 6.49255 7.01305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.057 4.057 3 C -0.140 4.140 4 C -0.141 4.141 5 C -0.089 4.089 6 H 0.096 0.904 7 C -0.148 4.148 8 C 0.110 3.890 9 H 0.079 0.921 10 N -0.691 5.691 11 C 0.555 3.445 12 O -0.572 6.572 13 C -0.189 4.189 14 C 0.133 3.867 15 F -0.137 7.137 16 C -0.151 4.151 17 C -0.050 4.050 18 C -0.131 4.131 19 C -0.076 4.076 20 O -0.544 6.544 21 Si 0.761 3.239 22 C -0.025 4.025 23 C -0.132 4.132 24 H 0.061 0.939 25 H 0.053 0.947 26 H 0.056 0.944 27 H 0.052 0.948 28 H 0.056 0.944 29 H 0.058 0.942 30 H 0.051 0.949 31 H 0.056 0.944 32 H 0.053 0.947 33 H 0.060 0.940 34 H 0.098 0.902 35 H 0.414 0.586 36 H 0.168 0.832 37 H 0.168 0.832 38 H 0.137 0.863 39 H 0.388 0.612 40 H -0.278 1.278 41 H -0.305 1.305 42 H 0.157 0.843 43 H 0.104 0.896 44 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.929 0.738 1.554 6.174 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.057 4.057 3 C -0.198 4.198 4 C -0.199 4.199 5 C -0.107 4.107 6 H 0.114 0.886 7 C -0.187 4.187 8 C 0.004 3.996 9 H 0.097 0.903 10 N -0.343 5.343 11 C 0.343 3.657 12 O -0.452 6.452 13 C -0.193 4.193 14 C 0.113 3.887 15 F -0.115 7.115 16 C -0.170 4.170 17 C -0.068 4.068 18 C -0.131 4.131 19 C -0.185 4.185 20 O -0.353 6.353 21 Si 0.667 3.333 22 C -0.043 4.043 23 C -0.170 4.170 24 H 0.080 0.920 25 H 0.072 0.928 26 H 0.075 0.925 27 H 0.071 0.929 28 H 0.075 0.925 29 H 0.077 0.923 30 H 0.070 0.930 31 H 0.075 0.925 32 H 0.072 0.928 33 H 0.079 0.921 34 H 0.117 0.883 35 H 0.252 0.748 36 H 0.185 0.815 37 H 0.185 0.815 38 H 0.155 0.845 39 H 0.238 0.762 40 H -0.204 1.204 41 H -0.233 1.233 42 H 0.174 0.826 43 H 0.122 0.878 44 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 5.841 0.539 1.409 6.033 hybrid contribution -0.664 0.945 -0.482 1.252 sum 5.178 1.484 0.926 5.465 Atomic orbital electron populations 1.22052 0.94799 1.01778 1.02044 1.20400 0.95431 0.95420 0.94414 1.21842 1.01094 0.95007 1.01834 1.21852 1.01049 1.00043 0.96934 1.22592 0.99684 0.94838 0.93566 0.88595 1.23577 1.02173 0.98203 0.94714 1.21926 0.87988 0.96228 0.93430 0.90261 1.45441 1.11083 1.36654 1.41072 1.18360 0.88251 0.79790 0.79284 1.90837 1.29898 1.59613 1.64858 1.20039 0.94958 1.01545 1.02734 1.18222 0.81374 0.93445 0.95651 1.91558 1.43720 1.84840 1.91405 1.21392 0.90225 1.03062 1.02305 1.21389 0.97557 0.93463 0.94367 1.20409 0.96300 0.98179 0.98248 1.25185 0.98221 0.85570 1.09491 1.86594 1.93425 1.22030 1.33203 0.94147 0.73950 0.88442 0.76810 1.21171 0.88891 0.97143 0.97141 1.23410 1.03357 0.94142 0.96098 0.91972 0.92769 0.92497 0.92921 0.92470 0.92307 0.93009 0.92463 0.92824 0.92100 0.88341 0.74793 0.81452 0.81464 0.84533 0.76243 1.20393 1.23333 0.82595 0.87810 0.89989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.35 7.48 71.98 0.54 0.89 16 2 C -0.06 0.17 0.68 -52.18 -0.04 0.14 16 3 C -0.14 0.46 8.31 71.98 0.60 1.06 16 4 C -0.14 0.31 8.43 71.98 0.61 0.92 16 5 C -0.09 0.32 2.91 -10.26 -0.03 0.29 16 6 H 0.10 -0.47 8.14 -2.39 -0.02 -0.49 16 7 C -0.15 0.02 7.08 31.12 0.22 0.24 16 8 C 0.11 0.18 4.32 45.51 0.20 0.37 16 9 H 0.08 0.55 7.46 -2.39 -0.02 0.53 16 10 N -0.69 -0.81 5.21 -443.05 -2.31 -3.12 16 11 C 0.55 4.63 7.77 86.74 0.67 5.30 16 12 O -0.57 -10.28 14.94 -3.95 -0.06 -10.34 16 13 C -0.19 -0.71 5.88 -20.05 -0.12 -0.82 16 14 C 0.13 0.72 7.29 22.67 0.17 0.89 16 15 F -0.14 -1.73 15.55 44.97 0.70 -1.03 16 16 C -0.15 0.34 10.01 22.28 0.22 0.57 16 17 C -0.05 0.33 8.66 22.31 0.19 0.52 16 18 C -0.13 0.76 5.39 -19.90 -0.11 0.65 16 19 C -0.08 0.55 2.82 71.24 0.20 0.75 16 20 O -0.54 2.24 12.76 -148.98 -1.90 0.34 16 21 Si 0.76 -5.61 29.78 68.60 2.04 -3.57 16 22 C -0.02 0.08 9.09 22.52 0.20 0.29 16 23 C -0.13 0.44 6.40 31.12 0.20 0.64 16 24 H 0.06 -0.18 6.05 -2.39 -0.01 -0.19 16 25 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 26 H 0.06 -0.09 6.46 -2.39 -0.02 -0.11 16 27 H 0.05 -0.13 8.14 -2.38 -0.02 -0.15 16 28 H 0.06 -0.20 8.14 -2.39 -0.02 -0.22 16 29 H 0.06 -0.21 7.56 -2.39 -0.02 -0.23 16 30 H 0.05 -0.06 8.10 -2.38 -0.02 -0.08 16 31 H 0.06 -0.15 8.14 -2.38 -0.02 -0.17 16 32 H 0.05 -0.09 8.14 -2.39 -0.02 -0.11 16 33 H 0.06 0.12 8.14 -2.39 -0.02 0.10 16 34 H 0.10 -0.01 5.69 -2.39 -0.01 -0.02 16 35 H 0.41 -2.04 6.73 -92.71 -0.62 -2.67 16 36 H 0.17 -1.08 8.06 -2.91 -0.02 -1.10 16 37 H 0.17 -1.99 4.86 -2.91 -0.01 -2.01 16 38 H 0.14 -1.32 7.96 -2.39 -0.02 -1.34 16 39 H 0.39 -3.52 8.70 -74.06 -0.64 -4.16 16 40 H -0.28 1.05 7.11 99.48 0.71 1.76 16 41 H -0.31 -0.48 7.11 99.48 0.71 0.23 16 42 H 0.16 -1.18 6.41 -2.91 -0.02 -1.20 16 43 H 0.10 -0.38 6.09 -2.39 -0.01 -0.40 16 44 H 0.08 -0.39 8.14 -2.39 -0.02 -0.41 16 Total: 0.00 -19.60 350.26 2.00 -17.60 By element: Atomic # 1 Polarization: -12.36 SS G_CDS: -0.20 Total: -12.56 kcal Atomic # 6 Polarization: 8.95 SS G_CDS: 3.73 Total: 12.68 kcal Atomic # 7 Polarization: -0.81 SS G_CDS: -2.31 Total: -3.12 kcal Atomic # 8 Polarization: -8.04 SS G_CDS: -1.96 Total: -10.00 kcal Atomic # 9 Polarization: -1.73 SS G_CDS: 0.70 Total: -1.03 kcal Atomic # 14 Polarization: -5.61 SS G_CDS: 2.04 Total: -3.57 kcal Total: -19.60 2.00 -17.60 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12335834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.925 kcal (2) G-P(sol) polarization free energy of solvation -19.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.528 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.005 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.598 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds