Wall clock time and date at job start Tue Mar 9 2021 13:41:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53006 * 109.46489 * 2 1 4 4 C 1.52998 * 109.47070 * 240.00688 * 2 1 3 5 5 C 1.52999 * 109.47464 * 120.00153 * 2 1 3 6 6 H 1.08999 * 112.84725 * 186.21432 * 5 2 1 7 7 C 1.53773 * 113.61260 * 317.52825 * 5 2 1 8 8 C 1.54050 * 87.07763 * 139.97642 * 7 5 2 9 9 H 1.08995 * 113.69729 * 220.05082 * 8 7 5 10 10 N 1.46505 * 113.61506 * 89.06679 * 8 7 5 11 11 C 1.34781 * 119.99466 * 107.61757 * 10 8 7 12 12 O 1.21274 * 120.00514 * 0.02562 * 11 10 8 13 13 C 1.50707 * 119.99371 * 180.02562 * 11 10 8 14 14 C 1.50700 * 109.46619 * 180.02562 * 13 11 10 15 15 C 1.38234 * 120.00012 * 269.72181 * 14 13 11 16 16 C 1.38230 * 120.00297 * 179.78742 * 15 14 13 17 17 C 1.38238 * 119.99704 * 0.47402 * 16 15 14 18 18 C 1.50700 * 120.00107 * 179.78745 * 17 16 15 19 19 O 1.42899 * 109.47226 * 119.96872 * 18 17 16 20 20 Si 1.86306 * 109.46934 * 359.97324 * 18 17 16 21 21 C 1.38238 * 119.99922 * 359.75556 * 17 16 15 22 22 C 1.38224 * 119.99913 * 0.03436 * 21 17 16 23 23 C 1.53781 * 86.98670 * 334.56743 * 8 7 5 24 24 H 1.08992 * 109.47447 * 306.29418 * 1 2 3 25 25 H 1.08997 * 109.47732 * 66.30425 * 1 2 3 26 26 H 1.09011 * 109.46572 * 186.30015 * 1 2 3 27 27 H 1.09002 * 109.46520 * 180.02562 * 3 2 1 28 28 H 1.08999 * 109.47405 * 300.00381 * 3 2 1 29 29 H 1.08997 * 109.46505 * 60.00505 * 3 2 1 30 30 H 1.09000 * 109.46983 * 299.99852 * 4 2 1 31 31 H 1.09007 * 109.47402 * 59.99661 * 4 2 1 32 32 H 1.09005 * 109.47458 * 179.97438 * 4 2 1 33 33 H 1.09005 * 113.61434 * 254.52372 * 7 5 2 34 34 H 1.08997 * 113.62017 * 25.34913 * 7 5 2 35 35 H 0.96998 * 120.00311 * 287.62603 * 10 8 7 36 36 H 1.08999 * 109.46858 * 299.99826 * 13 11 10 37 37 H 1.08997 * 109.47246 * 59.99834 * 13 11 10 38 38 H 1.08001 * 119.99757 * 0.02562 * 15 14 13 39 39 H 1.08004 * 120.00394 * 180.25184 * 16 15 14 40 40 H 1.08994 * 109.47379 * 239.97361 * 18 17 16 41 41 H 0.96699 * 114.00633 * 300.00235 * 19 18 17 42 42 H 1.48497 * 109.99680 * 180.02562 * 20 18 17 43 43 H 1.48499 * 109.99713 * 301.31936 * 20 18 17 44 44 H 1.07999 * 119.99892 * 179.97438 * 21 17 16 45 45 H 1.08004 * 119.99971 * 179.97438 * 22 21 17 46 46 H 1.09002 * 113.61328 * 270.84093 * 23 8 7 47 47 H 1.08990 * 113.62168 * 140.01862 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0400 -0.7211 -1.2493 5 6 2.0401 -0.7213 1.2492 6 1 3.1226 -0.6601 1.3608 7 6 1.2656 -0.3610 2.5279 8 6 1.3634 -1.8496 2.9121 9 1 0.4541 -2.2460 3.3638 10 7 2.5700 -2.1810 3.6741 11 6 2.4805 -2.4617 4.9893 12 8 1.4011 -2.4405 5.5418 13 6 3.7218 -2.8021 5.7732 14 6 3.3508 -3.0726 7.2086 15 6 3.3408 -2.0391 8.1265 16 6 2.9963 -2.2864 9.4421 17 6 2.6713 -3.5691 9.8420 18 6 2.3004 -3.8396 11.2774 19 8 0.9749 -4.3706 11.3349 20 14 2.3756 -2.2512 12.2482 21 6 2.6859 -4.6035 8.9252 22 6 3.0262 -4.3554 7.6086 23 6 1.4840 -2.1462 1.4080 24 1 -0.3634 0.6082 0.8282 25 1 -0.3634 0.4130 -0.9410 26 1 -0.3633 -1.0216 0.1128 27 1 3.1299 1.4426 -0.0005 28 1 1.6765 1.9565 -0.8899 29 1 1.6765 1.9563 0.8900 30 1 1.6767 -1.7487 -1.2494 31 1 1.6766 -0.2072 -2.1393 32 1 3.1300 -0.7207 -1.2496 33 1 1.8141 0.3001 3.1989 34 1 0.2464 -0.0231 2.3405 35 1 3.4333 -2.1983 3.2321 36 1 4.1895 -3.6890 5.3458 37 1 4.4199 -1.9662 5.7292 38 1 3.5985 -1.0376 7.8148 39 1 2.9846 -1.4781 10.1584 40 1 2.9990 -4.5594 11.7038 41 1 0.2992 -3.7820 10.9717 42 1 2.0124 -2.5047 13.6656 43 1 3.7408 -1.6723 12.1698 44 1 2.4324 -5.6057 9.2377 45 1 3.0380 -5.1637 6.8924 46 1 0.5239 -2.2977 0.9145 47 1 2.2082 -2.9262 1.1733 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17664192_12335836.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:41:10 Heat of formation + Delta-G solvation = -31.092908 kcal Electronic energy + Delta-G solvation = -24675.901057 eV Core-core repulsion = 21211.285098 eV Total energy + Delta-G solvation = -3464.615958 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 304.183 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.64890 -40.74667 -39.67415 -37.57874 -36.50630 -34.15281 -33.44836 -31.89289 -29.74531 -28.55481 -28.30145 -26.37715 -26.28870 -25.28488 -23.76552 -22.46149 -21.35400 -21.17773 -19.13957 -18.39898 -18.12547 -17.24789 -16.92921 -16.51931 -16.48190 -16.22552 -15.89229 -15.73773 -15.53589 -15.14687 -14.89788 -14.64973 -14.46500 -14.30210 -13.95743 -13.90093 -13.65276 -13.34995 -13.22136 -13.09477 -12.86804 -12.74529 -12.69110 -12.50087 -12.18022 -12.10714 -11.93047 -11.89656 -11.63296 -11.41777 -11.17576 -10.92531 -10.85732 -10.37602 -10.00588 -9.81630 -9.55781 -4.98078 0.28937 0.51598 1.34889 1.66200 1.66588 2.00313 2.11179 2.82786 3.46650 3.48975 3.50500 3.60515 3.67660 3.75993 3.81974 3.87991 3.97561 3.98884 4.06302 4.19027 4.20333 4.26101 4.38700 4.47048 4.50651 4.56498 4.63246 4.69078 4.69668 4.72538 4.73127 4.82742 4.87309 4.92194 4.95481 5.02881 5.05031 5.07635 5.11677 5.11800 5.19345 5.31514 5.40398 5.41253 5.42980 5.59496 5.62820 5.65545 6.04821 6.48426 6.63686 7.25679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.060 4.060 3 C -0.141 4.141 4 C -0.141 4.141 5 C -0.098 4.098 6 H 0.087 0.913 7 C -0.150 4.150 8 C 0.119 3.881 9 H 0.101 0.899 10 N -0.715 5.715 11 C 0.516 3.484 12 O -0.525 6.525 13 C -0.104 4.104 14 C -0.063 4.063 15 C -0.100 4.100 16 C -0.116 4.116 17 C -0.119 4.119 18 C -0.068 4.068 19 O -0.541 6.541 20 Si 0.688 3.312 21 C -0.091 4.091 22 C -0.104 4.104 23 C -0.144 4.144 24 H 0.059 0.941 25 H 0.055 0.945 26 H 0.059 0.941 27 H 0.053 0.947 28 H 0.054 0.946 29 H 0.055 0.945 30 H 0.055 0.945 31 H 0.054 0.946 32 H 0.053 0.947 33 H 0.068 0.932 34 H 0.096 0.904 35 H 0.400 0.600 36 H 0.104 0.896 37 H 0.105 0.895 38 H 0.124 0.876 39 H 0.126 0.874 40 H 0.113 0.887 41 H 0.380 0.620 42 H -0.255 1.255 43 H -0.258 1.258 44 H 0.126 0.874 45 H 0.122 0.878 46 H 0.098 0.902 47 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.151 2.153 -4.586 5.504 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.060 4.060 3 C -0.198 4.198 4 C -0.198 4.198 5 C -0.117 4.117 6 H 0.105 0.895 7 C -0.189 4.189 8 C 0.014 3.986 9 H 0.119 0.881 10 N -0.367 5.367 11 C 0.303 3.697 12 O -0.400 6.400 13 C -0.144 4.144 14 C -0.063 4.063 15 C -0.118 4.118 16 C -0.133 4.133 17 C -0.119 4.119 18 C -0.179 4.179 19 O -0.346 6.346 20 Si 0.591 3.409 21 C -0.109 4.109 22 C -0.122 4.122 23 C -0.182 4.182 24 H 0.078 0.922 25 H 0.074 0.926 26 H 0.078 0.922 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.072 0.928 33 H 0.087 0.913 34 H 0.115 0.885 35 H 0.235 0.765 36 H 0.123 0.877 37 H 0.123 0.877 38 H 0.142 0.858 39 H 0.143 0.857 40 H 0.130 0.870 41 H 0.227 0.773 42 H -0.180 1.180 43 H -0.183 1.183 44 H 0.144 0.856 45 H 0.140 0.860 46 H 0.117 0.883 47 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 2.046 2.094 -3.222 4.353 hybrid contribution 0.824 -0.482 -0.616 1.136 sum 2.870 1.612 -3.838 5.056 Atomic orbital electron populations 1.22043 0.94603 1.02029 1.01875 1.20432 0.95606 0.95356 0.94564 1.21847 1.00852 0.95328 1.01815 1.21849 1.00902 1.00294 0.96800 1.22628 0.99426 0.95279 0.94325 0.89479 1.23628 1.01873 0.96510 0.96861 1.21867 0.89037 0.96132 0.91608 0.88066 1.45704 1.10340 1.71393 1.09286 1.20564 0.90965 0.76362 0.81845 1.90752 1.29462 1.50575 1.69208 1.20695 0.96454 1.04578 0.92630 1.19256 0.99760 0.93796 0.93516 1.20903 0.99503 0.98588 0.92797 1.20938 1.00387 0.95698 0.96279 1.20327 1.01340 0.93847 0.96422 1.25046 0.86810 1.09293 0.96759 1.86486 1.15177 1.47808 1.85156 0.94612 0.85801 0.80674 0.79853 1.20950 0.98175 0.99104 0.92659 1.21014 0.98854 0.96222 0.96090 1.23457 1.02712 0.97223 0.94833 0.92219 0.92626 0.92243 0.92789 0.92665 0.92604 0.92561 0.92677 0.92773 0.91326 0.88533 0.76521 0.87746 0.87722 0.85821 0.85671 0.86996 0.77269 1.18026 1.18338 0.85623 0.86016 0.88339 0.91037 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.23 7.53 37.16 0.28 0.51 16 2 C -0.06 0.10 0.68 -154.51 -0.10 0.00 16 3 C -0.14 0.19 8.42 37.16 0.31 0.50 16 4 C -0.14 0.23 8.33 37.16 0.31 0.54 16 5 C -0.10 0.21 2.91 -89.81 -0.26 -0.05 16 6 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 7 C -0.15 0.17 7.05 -25.78 -0.18 -0.01 16 8 C 0.12 -0.08 4.34 -66.97 -0.29 -0.37 16 9 H 0.10 0.15 7.47 -51.93 -0.39 -0.23 16 10 N -0.72 1.01 5.27 -52.88 -0.28 0.73 16 11 C 0.52 0.47 7.82 -10.98 -0.09 0.39 16 12 O -0.53 -2.84 15.63 5.56 0.09 -2.75 16 13 C -0.10 0.16 5.83 -29.03 -0.17 -0.01 16 14 C -0.06 -0.06 4.37 -104.62 -0.46 -0.52 16 15 C -0.10 -0.10 9.70 -39.59 -0.38 -0.49 16 16 C -0.12 -0.12 8.67 -39.58 -0.34 -0.46 16 17 C -0.12 -0.19 5.39 -104.62 -0.56 -0.75 16 18 C -0.07 -0.07 2.82 36.01 0.10 0.03 16 19 O -0.54 -0.88 12.77 -35.23 -0.45 -1.33 16 20 Si 0.69 -0.01 29.79 -169.99 -5.06 -5.07 16 21 C -0.09 -0.18 9.61 -39.59 -0.38 -0.56 16 22 C -0.10 -0.16 9.70 -39.59 -0.38 -0.54 16 23 C -0.14 0.31 6.45 -25.92 -0.17 0.14 16 24 H 0.06 -0.08 6.43 -51.93 -0.33 -0.42 16 25 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 26 H 0.06 -0.10 6.00 -51.92 -0.31 -0.41 16 27 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 28 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 29 H 0.05 -0.06 8.05 -51.93 -0.42 -0.48 16 30 H 0.06 -0.09 7.61 -51.93 -0.39 -0.49 16 31 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.05 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.10 -0.10 5.72 -51.93 -0.30 -0.40 16 35 H 0.40 -1.60 8.70 -40.82 -0.36 -1.95 16 36 H 0.10 -0.37 8.08 -51.93 -0.42 -0.79 16 37 H 0.10 -0.38 8.08 -51.93 -0.42 -0.80 16 38 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 39 H 0.13 -0.09 4.88 -52.48 -0.26 -0.35 16 40 H 0.11 0.13 7.96 -51.93 -0.41 -0.28 16 41 H 0.38 -0.71 8.70 45.56 0.40 -0.31 16 42 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 43 H -0.26 -0.53 7.11 56.52 0.40 -0.12 16 44 H 0.13 0.18 8.06 -52.49 -0.42 -0.24 16 45 H 0.12 0.01 8.06 -52.48 -0.42 -0.41 16 46 H 0.10 -0.21 6.02 -51.93 -0.31 -0.52 16 47 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 370.31 15.07 5.58 5.58 Total: 0.00 -7.08 370.31 -10.67 -17.75 By element: Atomic # 1 Polarization: -5.48 SS G_CDS: -7.77 Total: -13.25 kcal Atomic # 6 Polarization: 1.11 SS G_CDS: -2.77 Total: -1.66 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.28 Total: 0.73 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.36 Total: -4.08 kcal Atomic # 14 Polarization: -0.01 SS G_CDS: -5.06 Total: -5.07 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -7.08 -10.67 -17.75 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17664192_12335836.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.345 kcal (2) G-P(sol) polarization free energy of solvation -7.081 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.667 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -31.093 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds